Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00743 ATGTCTCCTGCAGTTTCCATGACTCTGAGATTAGGTGATTCAAAGTCCGATACCTCTGACAGCACAAACCATATGGAAATCACGTGGCTCAAGCTGGTAACAGACAAAGCAAATTTGTCTGTGAAAAGTGGAAAAGAAATTTTCCAAGGCGACCAGCCTGAGTTTAATCAGGTGACGGCACCAGAAACAGATCGGGGGATTGTCGATTTGCTAGAGAGCGGAAAGATTTCGACTGTTTCAGATGGTATGATTGTAGAAAACAAAGACGATCAAACTTTATCCATGATGGAGGTTGCAAATGAAGTTATTGGGAAGGATGGAATGTTATCTGATGTTGGATCCGAAATTAGGCTGCCTGGTGTAGCAGAAATTAAGGATGTCAGTATTGATATTGGCCATTTTGTTACCAAAGCTATTATTTTGGTGAAACCAGTACAAGTGCCATCTGTGGAATTTATCGTGGCTTCAGTGAGCTCGGATTCAGAGATAGTTCAGAAGTCCGAGGTTAAATCCTCCAAAGTTGTTTACGAATTGAGCGGAGAGAAGAACGTAGGAAGCCTCATACGTGCTGTATTTGAGCTGAATTGTCTTCCTCTGTGGGGCTCAGTATCGATCAGTGGAAGACAACGCGAAATGGAAGATGAAATTGCTGCTATTCCTAATTTCCTGAACATTCCAGCCAAATTGCTTATCTGCAAGAACACAAGTAAGGGACATGGCCAAAACTTGACCCATTTTCAAAGTCACTTTTATGGCGTTTATGATGGCCACGGTGGATCTCAGGTTGCTAATTATTGTCGTGAGCAACTTCATTTGGCTTTAGCTGACGAGATCAGAGCCGTTGAGGAGGGTTTAACCGACACAGACATGGAGCAGAATATGGAGGAGCAATGGAAAGGAATATTCACCAATTGCTTTCTGAAGGTTGATGATCAAATCGGAGGAATCGTCGGGAACGGAGTAGTATCCAAACCAGTCGTCCCTGAAACTGTTGGATCGACTGCAGTGGTGGCGTTAGTCTGTCCAACGCATATCATAGTGGCGAACTGTGGGGATTCAAGAGCAGTCCTCTACCGTGGCAAAAAAGCAATCCCTCTGTCTGTTGATCACAAACCAAATAGAGAAGATGAGTCCATGAGGATCGAAGAGTCCGGTGGAAAGGTCATTCAATGGAACGGTTATCGTGTTTTCGGAGTTCTCGCAATGTCGAGAGCCATCGGTGATCGATATTTGAAGCCATGGGTTATTCCGGACCCGGAAATCACAGTGACACCACGGACCCGAGAGGACGACTGCCTTATTTTGGCAAGTGATGGGCTATGGGACGTTGTGACAAACGAGGAAGCGTGCGAAGCGGCTCGAAGGCGGATTCTGCTGTGGCACAAGAAAAACGAGTCGAGCAACATCACGGAAAGAGGGGAAGGGGTCGATCTGGCTGCACAGGCGGCGGCGGATTGCCTCGCAAGCCTTGCTCTTCAGAGGGGAAGCAGAGACAACATCTCTGTGATTGTGGTGGACTTGAAAGCCAGAAGAAAGGTCAAGGCCAAAACTTGA 1554 46.33 MSPAVSMTLRLGDSKSDTSDSTNHMEITWLKLVTDKANLSVKSGKEIFQGDQPEFNQVTAPETDRGIVDLLESGKISTVSDGMIVENKDDQTLSMMEVANEVIGKDGMLSDVGSEIRLPGVAEIKDVSIDIGHFVTKAIILVKPVQVPSVEFIVASVSSDSEIVQKSEVKSSKVVYELSGEKNVGSLIRAVFELNCLPLWGSVSISGRQREMEDEIAAIPNFLNIPAKLLICKNTSKGHGQNLTHFQSHFYGVYDGHGGSQVANYCREQLHLALADEIRAVEEGLTDTDMEQNMEEQWKGIFTNCFLKVDDQIGGIVGNGVVSKPVVPETVGSTAVVALVCPTHIIVANCGDSRAVLYRGKKAIPLSVDHKPNREDESMRIEESGGKVIQWNGYRVFGVLAMSRAIGDRYLKPWVIPDPEITVTPRTREDDCLILASDGLWDVVTNEEACEAARRRILLWHKKNESSNITERGEGVDLAAQAAADCLASLALQRGSRDNISVIVVDLKARRKVKAKT 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30639831 30641648 + BLOR17326 Blo06g00743 62036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00743 517 PANTHER PROTEIN PHOSPHATASE 2C 16 104 517 - -
Blo06g00743 517 SUPERFAMILY PP2C-like 192 508 IPR036457 -
Blo06g00743 517 Gene3D - 186 517 IPR036457 -
Blo06g00743 517 ProSitePatterns PPM-type phosphatase domain signature. 250 258 IPR000222 GO:0043169
Blo06g00743 517 Pfam Protein phosphatase 2C 231 500 IPR001932 -
Blo06g00743 517 MobiDBLite consensus disorder prediction 1 21 - -
Blo06g00743 517 SMART PP2C_4 189 505 IPR001932 -
Blo06g00743 517 ProSiteProfiles PPM-type phosphatase domain profile. 199 507 IPR001932 -
Blo06g00743 517 PANTHER ALPHABET, ISOFORM E-RELATED 104 517 - -
Blo06g00743 517 CDD PP2Cc 201 507 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00743 Blo-Chr6:30639831 Blo18g00273 Blo-Chr18:2890480 8.17E-154 dispersed
Blo08g00317 Blo-Chr8:4622255 Blo06g00743 Blo-Chr6:30639831 2.55E-10 dispersed
Blo18g00271 Blo-Chr18:2877399 Blo06g00743 Blo-Chr6:30639831 1.27E-39 dispersed
Blo18g00274 Blo-Chr18:2893165 Blo06g00743 Blo-Chr6:30639831 5.55E-70 dispersed
Blo06g00743 Blo-Chr6:30639831 Blo17g00280 Blo-Chr17:2952936 1.51E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00743 K14497 - jre:109011728 557.755