Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00744 ATGAACTTGGGTGCGGAGGAGGAAGAATCGCCGCAAGAGATACATATTCCGGCGGACGTCGATTGGGAGATGCTTGACAAATCAAAGTTTTTCTTCCTCGGTGCCGCCTTATTTTCAGGCGTGTCTGCGTCACTGTACCCTATTGTGGTGTTGAAAACCAGGCAACAAGTGGCTCAATCGCAGCACTCTTGCATCAGAACGGCGTTCTCCATTGTTCGACACGAGGGGTTTCGAGCTCTGTACAGAGGATTCGGAACTTCCCTGATGGGAACCATCCCAGCAAGAGCTCTATACATGGGCGCACTCGAGGTCACAAAGAGCAGCATTTGGACTGCAACCGTTAGGTTAGGGGTTCCTGAGGCAACTGCCGTGACCATTGCCAATGCTGGAGCTGGGTTGAGCGCAGCCATTGCTGCACAGGTTGTGTGGACTCCTGTGGATGTTGTGAGCCAGAGACTAATGGTTCAGAGTGGATGTAGTAGTAGAGGTAGTAGTAGAGTTTCTAATGCATCGCCTTGTAGGTATCTTAATGGAATCGATGCATTTAGAAAAATCCTTAACACAGATGGCCCGAGGGGTCTGTACAGGGGTTTTGGGATCTCAATTCTGACTTACGCTCCCTCAAATGCACTTTGGTGGGCATCGTACTCGATGGCGCAGCGGCTGGTTTGGGGCGGAATTGGATGCTATTTTGTGAAGAAAGAGGAGGATGGTGATGAACATAAGCCTAATGTGTTTAGACCAGATTCGAAAACCGTAATGGCAGTTCAGGGAGTCAGTGCAGCCATGGCTGGGGGGGTTTCGGCTTTAATAACGATGCCTCTCGACACAATCAAGACAAGATTGCAGGTTTTGAATGGCGAGGAAAACGGAATACCCAGACCCTCTATTGGACAGACTGTGAGGAATTTGGTGAAGGAAGGTGGGTGGAGGGCTTGTTACAGAGGGTTGGGACCTCGGTGGGCTTCAATGTCAATGTCTGCTACGACCATGATCACTACCTATGAGTTTCTGAAGCGGCTCTCCACCAAAAATGAAACTATTTGA 1047 49.67 MNLGAEEEESPQEIHIPADVDWEMLDKSKFFFLGAALFSGVSASLYPIVVLKTRQQVAQSQHSCIRTAFSIVRHEGFRALYRGFGTSLMGTIPARALYMGALEVTKSSIWTATVRLGVPEATAVTIANAGAGLSAAIAAQVVWTPVDVVSQRLMVQSGCSSRGSSRVSNASPCRYLNGIDAFRKILNTDGPRGLYRGFGISILTYAPSNALWWASYSMAQRLVWGGIGCYFVKKEEDGDEHKPNVFRPDSKTVMAVQGVSAAMAGGVSALITMPLDTIKTRLQVLNGEENGIPRPSIGQTVRNLVKEGGWRACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNETI 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30642411 30643457 + BLOR17327 Blo06g00744 62037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00744 348 Pfam Mitochondrial carrier protein 126 223 IPR018108 -
Blo06g00744 348 Pfam Mitochondrial carrier protein 38 109 IPR018108 -
Blo06g00744 348 Pfam Mitochondrial carrier protein 255 345 IPR018108 -
Blo06g00744 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Blo06g00744 348 SUPERFAMILY Mitochondrial carrier 23 338 IPR023395 -
Blo06g00744 348 Gene3D Mitochondrial carrier domain 28 347 IPR023395 -
Blo06g00744 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 252 341 IPR018108 -
Blo06g00744 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 222 IPR018108 -
Blo06g00744 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 2 346 - -
Blo06g00744 348 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Blo06g00744 348 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Blo06g00744 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 2 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00744 Blo-Chr6:30642411 Blo16g00502 Blo-Chr16:19958592 3.16E-09 dispersed
Blo01g01453 Blo-Chr1:53630259 Blo06g00744 Blo-Chr6:30642411 3.22E-108 transposed
Blo10g00165 Blo-Chr10:1963561 Blo06g00744 Blo-Chr6:30642411 1.55E-66 transposed
Blo05g00051 Blo-Chr5:423977 Blo06g00744 Blo-Chr6:30642411 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00744 K15121 - cpap:110818441 540.036