Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00756 ATGGACTCGGGGCCTTCGAAGGCGGCTGAGGAGATTGTCCTGCGCTGGGACTCGACGGCGTCCGAGGATGCCCGTGACAAGATGATTTTTGAGAGCGATAGGGAGGAGATTGATCGCTACTTACAGGCCGTCGATGAAATTCAACGCTCCGTGTCTTCTGTTTCCTTGTCCGATGACCAATCTAAAGTCAACTCCACCATCCAGATCGCCATGGCTCGCCTCGAGGACGAGCTCCGTAATATCCTCATCACCCACACCAACCCCGTCGAGGCTGAATCCCTAACGGATCCGATCCCTTCCACTCCCTCCGCCTCCGGCCGCGGTTGCAATTTTAAGGATGAAAATGAAGACGAGGCTGTTATCTCCGTCGAAGATGACCTCAGTTTCAGTGACAGTCCAAGTTACCACTCCAGTTGTCGATCCAGCTACCGATCAACAAGCAGTATTCGCGAGATCGATCTGATACCTTCCGATGCCGTCTTCGATCTTAGAAGCATCGCTGAGCGAATGATTGCGGCTGGCTACTTGCGAGAGTGTATCCAAGTGTATGCCAACGTGCGAAAGTCTACCTTTGACTCAAGCTTTCGGACGCTCGGCGTCGAGAGATTGAGCATCGGAGATATACAGAGGCTGGACTGGTCCGAGCTAGAGACGAAGATCAGAAGGTGGATAAAGGCCGCACGAGTTTGTGTTAGGATTCTTTTTGCGAGCGAGAAGAAGCTGTGCGAGGAGATCTTCTATGGTATAGGTACCGCCATTGACGATGCTTGTTTTATGGAGACAGTAAAGGGCCCGGCCATCCAGCTATTTAATTTTGCAGAGGCGATTAGCATAAGTGGTAGGTCACCGGAAAAGTTGTTCAAGATTTTAGACCTTCATGATGCGTTATTGAATATGATACCTGACATTGAAGAAGTATTCGAATCCAAATCGGCGGAATCAATTAGGCTTCAGGCTTCAGAGATTCTGTCTCGATTGGGGGAGGCAGTCAGGGGCATTATCTCTGAGTTCGAGCATGCCGTGCTCAGCGAGCCCTCATTGGTGCTGGTACCAGGCGGGACAATGCACCCTTTGACGAGGTACGTGATGAACTACATTGGTTTGATTTCTGATTACAAGCGAACCTTAAGTGAGCTTATTGTATCAAAACCCTCTCCGGGGTCGAGATACTCCGGCGATGCTGTGAACCCTCCTGATATGGAGTTTGCAGAAATAGAAGGGAAATCCCCATTAGAGCTCCATTTGATTTGGATGATTGTAATTCTGCTATTTAATTTGGAGGGGAAGTCCAGGCACTACAAAGATATTTCGTTGGCACACTTGTTTATCATGAACAATGCTCACTACATTGTTCAGAAAATAAAAGGATCATCCGATCTGAGACAAATGATTGGGGATGTTTATCTGAAGAAATGGACCAGAAAATATCGACAGGCTGCAACCTGCTACCAGAGAGCAACATGGGTGAGGGTGTTGTTGTGCTTAAGGGACGAGGGGTTACATGTAAGTGGGAGTTTCTCTTCAGGGGTCTCAAAGAGTGCTTTGAGAGAGAGGTTTAAGACCTTTAATGCTATGTTTGAGGAGGTTCATAGGACTCAAGCCGGTTGGTTTATCCCAGATTCTCAGCTCAGAGAGGAGCTGCGCATATCTATAGCAGAAAAAATAATCCCTGCTTATAGAGCATTTCTTGGGCGGTACAGGCAGTATATCGAGAGTGGAAAGCACCCAGAAAACTACATCAAGTACTCGGAGGAGGAGTTGGAGAATGCTGTCTTGGATTTCTTCGAGGGTTGCCCAGTATCCCAGCATTTTAGGAGGAGATCTTGA 1827 48.17 MDSGPSKAAEEIVLRWDSTASEDARDKMIFESDREEIDRYLQAVDEIQRSVSSVSLSDDQSKVNSTIQIAMARLEDELRNILITHTNPVEAESLTDPIPSTPSASGRGCNFKDENEDEAVISVEDDLSFSDSPSYHSSCRSSYRSTSSIREIDLIPSDAVFDLRSIAERMIAAGYLRECIQVYANVRKSTFDSSFRTLGVERLSIGDIQRLDWSELETKIRRWIKAARVCVRILFASEKKLCEEIFYGIGTAIDDACFMETVKGPAIQLFNFAEAISISGRSPEKLFKILDLHDALLNMIPDIEEVFESKSAESIRLQASEILSRLGEAVRGIISEFEHAVLSEPSLVLVPGGTMHPLTRYVMNYIGLISDYKRTLSELIVSKPSPGSRYSGDAVNPPDMEFAEIEGKSPLELHLIWMIVILLFNLEGKSRHYKDISLAHLFIMNNAHYIVQKIKGSSDLRQMIGDVYLKKWTRKYRQAATCYQRATWVRVLLCLRDEGLHVSGSFSSGVSKSALRERFKTFNAMFEEVHRTQAGWFIPDSQLREELRISIAEKIIPAYRAFLGRYRQYIESGKHPENYIKYSEEELENAVLDFFEGCPVSQHFRRRS 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30796856 30798682 - BLOR17339 Blo06g00756 62049

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00756 608 Pfam Exo70 exocyst complex subunit 222 591 IPR046364 GO:0000145|GO:0005546|GO:0006887
Blo06g00756 608 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 7 608 - -
Blo06g00756 608 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 608 IPR004140 GO:0000145|GO:0006887
Blo06g00756 608 SUPERFAMILY Cullin repeat-like 22 596 IPR016159 -
Blo06g00756 608 Gene3D Exocyst complex component Exo70 13 605 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00756 K07195 EXOC7, EXO70; exocyst complex component 7 - mnt:21391539 900.968
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo06g00756 Blo12g00287 BCT
Blo05g00033 Blo06g00756 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00756 Blo-Chr6:30796856 Blo16g00265 Blo-Chr16:6254324 1.32E-149 dispersed
Blo01g01242 Blo-Chr1:47138045 Blo06g00756 Blo-Chr6:30796856 2.34E-117 transposed
Blo13g00674 Blo-Chr13:29476600 Blo06g00756 Blo-Chr6:30796856 4.42E-113 transposed
Blo05g00033 Blo-Chr5:285505 Blo06g00756 Blo-Chr6:30796856 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1307 . . . . . . . Bma15g00313 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00293 . . Blo06g00756 Blo12g00287 . . . . . . . . . . . . . . Cpe03g01216 . . . . . . . . . . . . . . . . . .
Vvi9g67 Blo05g00033 Blo06g00756 Bda04g00941 Bda10g00882 Bpe06g00808 Bpe10g00709 . . . . Cma01g00010 . Car01g00006 Car14g01052 . . . Bhi01g02900 . . Lac12g2533 . . . . . . . . . . Cone20ag1348 Cone17ag0057 . . . . . . . . . . . . Bma09g00990 Bma15g00313 . Cmo01g00011 . . . . . . . . . . . . . . . . . . . . . . Csa03g02774 . Cme04g01362
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo13g00674 . 4 642 EXO70 exocyst subunit family AT5G03540 75.8 5.6e-277 950.3
Blo01g01242 . 1 628 EXO70 exocyst subunit family AT5G03540 72.3 6.0e-263 903.7
Blo01g01242 . 1 626 EXO70 exocyst subunit family AT5G52340 79.2 1.3e-286 982.2
Blo13g00674 . 6 642 EXO70 exocyst subunit family AT5G52340 73.3 2.4e-269 924.9
Blo01g01242 . 139 628 EXO70 exocyst subunit family AT5G52350 61.8 2.6e-169 592.4
Blo13g00674 . 141 636 EXO70 exocyst subunit family AT5G52350 58.5 7.1e-159 557.8
Blo14g00063 . 1 630 EXO70 exocyst subunit family AT5G58430 66.7 1.4e-250 862.4
Blo14g00063 . 1 629 EXO70 exocyst subunit family AT1G07000 50.2 9.8e-172 600.5
Blo01g00176 . 54 647 EXO70 exocyst subunit family AT5G13150 50.3 2.0e-162 569.7
Blo06g00756 BCT 8 608 EXO70 exocyst subunit family AT1G72470 63.6 3.8e-214 741.5
Blo05g00033 BCT 7 607 EXO70 exocyst subunit family AT1G72470 61.0 1.8e-200 696.0
Blo06g00756 BCT 9 606 EXO70 exocyst subunit family AT1G54090 62.2 6.5e-211 730.7
Blo05g00033 BCT 7 605 EXO70 exocyst subunit family AT1G54090 59.8 3.8e-203 704.9
Blo06g00756 BCT 2 607 EXO70 exocyst subunit family AT3G14090 62.7 2.3e-216 748.8
Blo05g00033 BCT 2 606 EXO70 exocyst subunit family AT3G14090 61.0 1.7e-206 716.1
Blo16g00265 . 13 648 EXO70 exocyst subunit family AT5G50380 60.9 2.4e-222 768.8
Blo04g01171 . 13 650 EXO70 exocyst subunit family AT5G50380 60.4 3.0e-217 751.9
Blo15g00211 . 13 639 EXO70 exocyst subunit family AT5G50380 56.7 2.2e-199 692.6
Blo12g01102 . 3 674 EXO70 exocyst subunit family AT4G31540 69.3 1.5e-280 962.2
Blo01g01340 . 1 666 EXO70 exocyst subunit family AT4G31540 69.7 6.8e-278 953.4
Blo04g00295 . 42 633 EXO70 exocyst subunit family AT3G55150 50.5 4.8e-161 565.1
Blo07g01191 . 32 609 EXO70 exocyst subunit family AT3G55150 50.7 3.5e-159 558.9
Blo14g00136 BCT 10 602 EXO70 exocyst subunit family AT3G55150 50.5 8.0e-156 547.7
Blo07g01191 . 32 609 EXO70 exocyst subunit family AT2G39380 51.5 9.4e-165 577.4
Blo04g00295 . 22 633 EXO70 exocyst subunit family AT2G39380 50.4 1.6e-164 576.6
Blo07g01191 . 1 615 EXO70 exocyst subunit family AT3G09520 55.2 6.6e-179 624.4
Blo09g00560 . 1 617 EXO70 exocyst subunit family AT3G09520 52.7 2.0e-167 586.3
Blo14g00136 BCT 11 603 EXO70 exocyst subunit family AT5G59730 53.1 2.0e-167 586.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007044 2 1 2 2 2 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00756 Blo_Chr06 FPKM 97.238739 110.386147 110.349846 106.494812 68.693672 70.898331 68.71347 44.469307 51.057209 49.719429