Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00789 ATGGAGCTGAGATCCCAGTCGGTGTCGGTGGCGGTGGCGGTTGTCATAACCGTAGTGTTTGCCTGCCAGTCTTGTTGGGCCGCCGTTTCCGATGGATCTGAGACCGCTTCTCTTCCTCTTCCATTCATATCGATAGAGCACCACGATGACGCTTTGCTTTCTTTCCTGGACAGCCAACCCTCCTCCAGTCCTTTGATGGTCCCCCTCACTCTCATTCCCCGAGCTGCTTCTACTGGAGCTGTCTGTTTGGACGGATCACTGCCTGGTTATCATTTCCATCCTGGCCTTGGATCTGGTGGAAATAGCTGGCTAATTCAATTGGAGGGAGGAGGTTGGTGTAATACAATCAGGAATTGCGTATTTCGCAAAACTACTCGCCGGGGTTCTTCTAAATACATGGAAAAGCAATTACCATTCACTGGAATACTGAGCAATAAAGCTGAGGAAAATCCTGACTTCTTCAACTGGAACAGAGTAAAGTTGCGTTATTGCGACGGAGCATCTTTCAGCGGGGACAGTTACAACAAGGCAGCACAGCTTAATTTTCGAGGACAGCGTATATGGTTGGCCGCCATCGAAGAGTTAATGTCAAAGGGAATGCACAGCGCCAATCAAGCCTTGCTTTCTGGGTGCTCTGCCGGAGGTCTTGCCGCAATATTGCATTGTGATGAGTTTCGAGCCTTCTTCCCCAAGACTACGAAAGTGAAATGTCTAAGCGATGCGGGATTGTTCCTCGATGCAATTGATGTGTCGGGTGGGCGAACAATGAGGAATTTATTTGGAGGCGTCGTCAGCTTACAAGGAGTTCAAAGGAATCTTCCAAGTACTTGCATTAACCACCTGGATCCAACATTGTCGAAATATTTTTGCAATTGCTCATTTGAACTCTCTCTTACACGTCTATCGCATGGCGGTTTTGGTCTGTTCCAGTGCTTCTTCCCTCAAAATGTTATAGCAGGTATCAAGACCCCACTGTTTCTTCTTAATGCAGCATATGATGCATGGCAGCTCCAAGCAAGTTTGGCTCCGCCATCGGCCGATCCTCATGGATCTTGGGTTGGATGCAAGTTGAACCATGCCCATTGCAATTCATCTCAGATCCAGTTTCTCCAAGACTTCAGGTCTCAGATGCTCTACGCAGCCAAGAACTTCTTGTTGCCCAATCGAAATGGCGCGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCAGAAAGGCAGGATACATGGTTTGCAGATGATTCTCCTCTAATTCAAAACAAGCCAATTGCGCTTTCTATTGGGGATTGGTTCTTCGACCGAGCTAGCATCAAAGAAATAGACTGCGCCTACCCCTGTGACAGTACGTGCCATAATCTGGTTTTCAACTGA 1368 47.51 MELRSQSVSVAVAVVITVVFACQSCWAAVSDGSETASLPLPFISIEHHDDALLSFLDSQPSSSPLMVPLTLIPRAASTGAVCLDGSLPGYHFHPGLGSGGNSWLIQLEGGGWCNTIRNCVFRKTTRRGSSKYMEKQLPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSYNKAAQLNFRGQRIWLAAIEELMSKGMHSANQALLSGCSAGGLAAILHCDEFRAFFPKTTKVKCLSDAGLFLDAIDVSGGRTMRNLFGGVVSLQGVQRNLPSTCINHLDPTLSKYFCNCSFELSLTRLSHGGFGLFQCFFPQNVIAGIKTPLFLLNAAYDAWQLQASLAPPSADPHGSWVGCKLNHAHCNSSQIQFLQDFRSQMLYAAKNFLLPNRNGAFINSCFAHCQSERQDTWFADDSPLIQNKPIALSIGDWFFDRASIKEIDCAYPCDSTCHNLVFN 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31184078 31187202 + BLOR17372 Blo06g00789 62082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00789 455 Pfam Pectinacetylesterase 62 434 IPR004963 GO:0016787
Blo06g00789 455 PANTHER PECTIN ACETYLESTERASE 14 289 - -
Blo06g00789 455 PANTHER PECTIN ACETYLESTERASE 310 454 - -
Blo06g00789 455 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Blo06g00789 455 PANTHER NOTUM-RELATED 14 289 IPR004963 GO:0016787
Blo06g00789 455 PANTHER NOTUM-RELATED 310 454 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01115 Blo-Chr1:40014037 Blo06g00789 Blo-Chr6:31184078 2.68E-134 dispersed
Blo06g00789 Blo-Chr6:31184078 Blo18g00683 Blo-Chr18:13925275 8.13E-159 dispersed
Blo06g00789 Blo-Chr6:31184078 Blo02g01173 Blo-Chr2:43410797 6.18E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00789 K19882 - mnt:21397057 644.81