Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00809 ATGGGAACCTACCTGCGAATTCCGGAAGAAGACGACGACCAACACATATTTCGTAGCCATTTTCCGGCCGTTCAAGTGCCGGAAAACATCACGCTGCCGGAGTTCGTGCTCCAAGATGCCGAATTGTACGCAAACAAGGTCGCGTTAGTGGAGGCTTTGACGGGGAAGGAGATTACGTATGGAGAAGTTGTTCGAGACACGAAGAGGCTCGCAAAGGCCTTGAGATCTTTGGGTTTAAGAAAGGGACAAGTTGTATTAGTTTTACTCCCAAATGTCGCAGAATACGCCATTGTTGTTCTTGGAATAATGAGCTCCGGCGGAGTGTTTTCCGGTGCAAACCCTTCCGCTCACTCTTCTGAAATCAAAAAGCAAGTTGAGGTTGCAGAGGCGAAGCTTATTATCACCAATGGCCCAAACTATGAAAAGGTTAAGGGGCTTGATCTTCCAGTTATCGTACTCGGCGAAGAACCGATCGAAGGGGCGATGAACTGGGACAAGCTGCTCGAGGCAGCAGATCGAGCCGGAACCGAAATAAACTCGGTCGAATCCATAAAACAGACCGATCTATGTGCATTGCCATTCTCATCGGGCACAACAGGAGTATCAAAGGGTGTAATGCTAACTCATAGAAATCTGGTGGCTAATCTCTGCTCCACACTATATAATGTGCCGCAAGAAATGGTGGGTCAAGTCACAACGCTTGGTCTAATCCCATTATTTCACATTTATGGGATTACTGGAATTTGCTGTGCTACGCTTAGAAACAAGGGGAAAGTGGTGGTGATGGGGAGATTTGAGCTGAGAATGTTTCTCAACGCATTGATCACTCAGGAGGTTACTTTTGCTCCGATTGTGCCGCCGATTATCTTGGCTTTGGTCAAGAATCCAATTGTGGAGGAATTTGATCTTACCAAGCTCAAACTCCAGGCCATTATGACTGCCGCTGCTCCCCTCGCACCGGAGCTTCTCTCCGCGTTTGAAAAAAAATTTCCCGGCGTCGATGTTCAGGAGGCGTATGGATTGACGGAGCACAGCTGCATCACGCTCAACTATGGTGGCATTGAAAGAGACAAAGGCAGATTGAAGAAGAACACAGTGGGTCAAATTCTTCCGAATTTACTCGTTAAATTCATTGACCCTGAAACTGGTAGATCCTTACCCAAGAACACTCATGGTGAAATCTGCGTCAAAAGCCAGTGTGTGATGAAAGGATATTTCCGAAACGAGGAGGAGACTTGCCGGACCATCAAGAATGGGTGGCTCCACACCGGCGACATTGGCTACATTGATGACGACGGGGATGTGTTCATCGTGGATCGCATCAAGGAATTGATCAAATACAAAGGCTTTCAAGTGGCTCCGGCAGAATTAGAAGCAATCTTACTCACTCACCCCTCCATTCAAGACGCAGCTGTAGTGCCGTTTCATGATTTATCTGACTTTGACGAGAAAAAACGTAGCTGTCGTAAGCGTCTTTCTGATCACAATGCCAGGCGTCGTAAGTCACAACCAAAAGTAACAAGTTTTAATTCAGGAAGCACGTCATCAGTCTATGATCCGAGGCAACAAATGAGCCTTTCTTTGGATATGGTTCCGCCTACTTTTCAGAGACCTGCAGCAAATTTAGCATGGGAAGCTCTATGCAGCTCCAAATACGCACAAACATGCCAAAGGAAACCTGAAAAAGCAATCTGCAAAAATGGGCAGCATCCTCTGGGGATTGAGAAGCCGTTTACAATCACTATACCTCATCGTAACTCAAGTAAGCTCTTTGCAACCAGAGGAATGGCTGCTGACGATCTTAACTCAGCTCAGGATTACAATAGTGCTCTCTCTCTTCTGTCAACCGATGCTTGGGGCTTGTGTGAATCGAAAAATATTTTGCCTCAGAACCACAAGCAGCCAAACCAAACTAGCATGTCCTCTGCTGGGCTACAAACAACAATCCAGAGCGCATCTCTTCCTTCAGACCAGTGGCGAGATGAGCACAACAATTCGTCAGCATCCGGATTTCATATATTCCAGCAACAAGGGGATGGAGGTATAGATTTTCAGCTCTTTAAATCACCACTTGAGAATGGACTATACCCAGATCTCTTAGGTTGA 2106 46.49 MGTYLRIPEEDDDQHIFRSHFPAVQVPENITLPEFVLQDAELYANKVALVEALTGKEITYGEVVRDTKRLAKALRSLGLRKGQVVLVLLPNVAEYAIVVLGIMSSGGVFSGANPSAHSSEIKKQVEVAEAKLIITNGPNYEKVKGLDLPVIVLGEEPIEGAMNWDKLLEAADRAGTEINSVESIKQTDLCALPFSSGTTGVSKGVMLTHRNLVANLCSTLYNVPQEMVGQVTTLGLIPLFHIYGITGICCATLRNKGKVVVMGRFELRMFLNALITQEVTFAPIVPPIILALVKNPIVEEFDLTKLKLQAIMTAAAPLAPELLSAFEKKFPGVDVQEAYGLTEHSCITLNYGGIERDKGRLKKNTVGQILPNLLVKFIDPETGRSLPKNTHGEICVKSQCVMKGYFRNEEETCRTIKNGWLHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIQDAAVVPFHDLSDFDEKKRSCRKRLSDHNARRRKSQPKVTSFNSGSTSSVYDPRQQMSLSLDMVPPTFQRPAANLAWEALCSSKYAQTCQRKPEKAICKNGQHPLGIEKPFTITIPHRNSSKLFATRGMAADDLNSAQDYNSALSLLSTDAWGLCESKNILPQNHKQPNQTSMSSAGLQTTIQSASLPSDQWRDEHNNSSASGFHIFQQQGDGGIDFQLFKSPLENGLYPDLLG 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31350550 31358338 + BLOR17392 Blo06g00809 62102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00809 701 Pfam SBP domain 475 501 IPR004333 GO:0003677
Blo06g00809 701 Pfam AMP-binding enzyme 39 447 IPR000873 -
Blo06g00809 701 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 477 - -
Blo06g00809 701 SUPERFAMILY Acetyl-CoA synthetase-like 14 495 - -
Blo06g00809 701 ProSiteProfiles Zinc finger SBP-type profile. 424 502 IPR004333 GO:0003677
Blo06g00809 701 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 9 477 - -
Blo06g00809 701 MobiDBLite consensus disorder prediction 491 518 - -
Blo06g00809 701 Gene3D - 443 504 IPR045851 -
Blo06g00809 701 MobiDBLite consensus disorder prediction 503 518 - -
Blo06g00809 701 ProSitePatterns Putative AMP-binding domain signature. 192 203 IPR020845 -
Blo06g00809 701 Gene3D - 14 442 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00809 Blo-Chr6:31350550 Blo07g00521 Blo-Chr7:13331488 2.87E-107 dispersed
Blo06g00809 Blo-Chr6:31350550 Blo10g00493 Blo-Chr10:10700215 9.99E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12504 PF00501 AMP-binding 1.60E-93 CL0378 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00809 K01904 - qsu:112038127 729.939