Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00821 ATGGATGTAGGATTGGAGATCATCAACTTTGCGTTCTTCGTTCCATTGCTTTCATGGGTTCTGCTCAAATTTTGGAGAAGAAACAGAGCTACTGAAAATGGAGACGAAACCCATTTAAGAAATGGAGCTGTTAAAGAATTCAAATGGCTTAGAACAATCACTATTTACTCTAACGCCATTATCTCAACTCTTTACCTAAGCTTTGGCTGTTATGGGTACTGGAATTACAGAATTATAAGGAGCAAATCAGTTGCTTCAGCCATTACTTGGCTACTTGCTACAGTGGTAACTTTCTGTTCAGAAAATAGGAATCTTTTTGAAGAAGATAAAAGGTGGCCTTCAGCCCTTGTTTTTTGGTGGGTTTTTTCAAGTTTATACCTTTTGGCTTCTCTCTGTATCTACTTCTTAATCCACTTGAAATCCATTGATTTTCCAAATTTTCTTCCCCGAGCAAATGCTGTAGATTTTGCCGCTTTCCCTCTATCCATCATCGTCTGTTTTGCTGCTTTAGCCATTGGCTGTCCTCGGAAAAACAGTGAGATTGAACGCTCACTGCTTCAGAAAGAAGGTAGTTTTTCTGAAGATGATTCTTTTACTAATGCTGGAATTTTGAGTAAACTTACATTTCAATGGCTGAATCCGCTTTTCAAGAGGGGAAGAATACAGAAGCTTGAATTGTCTCACATCCCTCCTGTTCCTCCATCTGAAACTGCTGAAGATGCTTTTTTTCTGCTCGAGGAAAGTCTTCGCAGACAGAAAATGGAGTCTTCTTCTTTGCCTGAAGCTCTCATCCATGCTATAAGAAAATCATTGGCCGTAACTGCAATATTTGCAGGATCAAACACAATAGCATCTTACATGGGCCCATTCCTAATCACAAATTTCGTCGATTATTTGCTGGAAAAGAGCGAGAACTCGAGTATGCGATACGGCTTCATTCTCGCATTCATCTTCTTCTTCGCAAAGACAGTAGAGTCACTTGCTCAAAGGCAATTGTATTTAGGCACCCATCGAGCCGGTATTCGAATAAAAGTAGCTCTGACGGTTCTAATTTACAAGAAATCCATATCAATCAACTATGCCGGTCCGAGCAGCGGTAAAATCGTCAATTTCATCAATGTCGATGTCGAAAGAATAGGAGATTTCTGTCGGTATGTCCATGAAATTTGGCTGCTTCCAGTTCAAGTTCTTCTCGCCCTTGTAATTCTTTACTGGAATTTGGGAGCTGCCCCCTCCTTTGTTGCTCTTCTGGCCACCCTTTTCGTGATGGTCTGCAATACTCCTCTGGCCGGCGTCCAAGAGCGGATGCATTCGAAGATCATGGAAGCCAGAGATTCGAGAATAAAACTGACTTCTGAGGCTTTGAAAGGGATGAGAGTTTTGAAGCTTCATTCATGGGAGTCCACATTCTTGAAGAAGATTCTAGAATTAAGAAAAACCGAGAGAAGCTGGCTGAAGAGATATCTTTATTCCTGCTCGGCTGTCGCATTTCTCTTCTGGGTTTCGCCCACTTTGGTTTCGGTCATCACTTTCGGGACCTGCATTGCGTTGAAAGCGCCATTAACGGCAGGCTCTGTTCTCTCTGCTTTGGCTACTTTTCGAATTCTGCAAGAACCGATCTATAACCTGCCCGAGCTGATTTCCATGATTGCTCAAACGAAAGTCTCCGTTTATCGAATTCAAGAGTTTATTCGATCCGAAGAAGATCAAAAGAGGCTACTTCATTATCCTTCTCGGAGACAGTCCGATATCGCGATTGACATCGAGACGGGGGAATATTCTTGGGATATGACCGATCTTAATCTAAAGAAACCCGCCATAAAAATAAGCGAGAAGATCAAGATAATGAAAGGCTATAAAGTTGCAGTTTGCGGATCGGTTGGTTCAGGAAAATCGAGCCTCCTCTGTAGCGCACTGGGGGAGATTCCTCGGATTTCAGGGACGGCGATGAAGGTTTATGGTACGAAAGCTTATGTTCCTCAGAGTGCATGGATTCAGTCAGGGACTGTAAGAGATAATGTTCTATTTGGGAAGGATATGAACAGGCTCTTTTATGAGGATGTTTTAGAAGCTTGTGCTTTAAACCAAGACATAAAGACGTGGTTCAATGGCGATTTGACGATTGTGGGCGAGAGAGGAATGAACTTAAGCGGAGGACAAAAACAGAGAATTCAACTGGCGAGGGCCGTCTATAGCGATTCGGACATTTACTTCCTCGACGATCCTTTCAGCGCTGTCGACGCACATACCGGATCGCATCTGTTTAAGGCAAGATGTCTGTGTCTTCTGCAACTCTTATCTGAAAAGACTGTAATTTATGCTACGCATCAGTTGGAATTCATAGAAGCAGCAGATCTTGTTCTGATGGAGCAATATAATCTGCAGGTCATGAAGAACGGTCGGATTGTTCAAACGGGAAAGTACACCGACTTGGTCGCGGATTCCGAAAGCGAGCTTGCTCGGCAGATTTCGGCGCATAGAAATACGCTAAACCATGTAAATCCATGCAAAGAGGTTTCATCTTGTCCTCAAAAACCCTACTGTTATAGCCAAATAGAATCGGCCGAAGAACGATCTGGAGAGCCTCTAGAAAACGGCGAGTTCTCGGCGAGAAACGAAGAAGAGGAAGCTCAGACGGGTAGAGTAAAATGGAGCGTTTACTCCGGCTATGTCACATCGGCTTTTGGAGGAGCTCTCGTTCCGGTCATCCTTCTATGTCAAGTTCTCTTCCAGGCACTGCAAATGGGCAGCAATTACTGGATTGCCTGGGCAGCTGAGAATGCAGGTAAGGTGAGTAGAGAGAGACTGATAGCCATATTTGTCCTCTTGTCTGGTGGAAGCTCCATTTTCATCTTTGGAAGAGCTCTTTTGCTGACAACCGTTGCGATCGAGACAGCCCAGCGGCTCTTCCTCGGAATGATCAGGGCTGTTTTTCAAGCGCCCATTTCGTTCTTCGATTCCACGCCTTCGAGCCGGATTCTCAACAGATCTTCCACCGATCAAAGCACAATTGACACTGATATTCCATACCGATTAGCCGGATTAGCATTCGCTCTTATTCAGCTCTTGAGCATCATCATCCTCATGTCCCACAGATACTATATAACTACAGCTAGAGAAATAGCCAGGATGGTTGGCATTCGAAAAACGCCAATTATCCATCACTTCTCGGAATCGATCAGCGGGGCAACTACGATTCGATGTTTCAACCAGGAAGATCGATTTGTGACGAAAATGCTGAACTTCATCGACGATTACTCTCGCGTGGCTTTTCACAATTCTACGACGATGGAGTGGCTTTGTCTGCGTATTAATTTTCTCTTCAACGTCGTTTTCTTATTCGTTTTGATCGTCTTGGTGACCTTGCCCAGATCCGCCATTGATCCTAGTTTGGCGGGATTGGCGGCTACTTACGGATTAAATTTGAATGTTCTCCAAGCGTGGGTGATTTGGAACCTCTGCAACGTCGAGAACAAAATGATATCGGTCGAGCGAGTTCTTCAGTTTACGAAATTGCCAACTGAGGCCCCACTGACCATCGAAGATTGCAGGCCAAATCCTGACTGGCCAAGCAATGGCAGAATAGAAATTGAAAACCTTCATGTCCAATACAATCCATCTCTCCCCATGATTCTCAAAGGGATCACTTGTACATTTCCAGGAAGTAAAAAAATTGGAATCGTGGGGAGGACGGGAAGCGGAAAGTCGACGCTAATTCAAGCTCTTTTCAGGCTGGTAGAGCCCTCCGACGGACGGATTCTCATCGACGGAGTCGATATTTGTAAAATCGGTTTGCCGGATTTAAGAACGAGATTGGGAATAATTCCTCAAGATCCAACCTTGTTTCAAGGAACTATCAGAACAAATGTGGATCCTCCGCGGCAACATATCGATCGCGAAATATGGGAGGTTCTTGACAAGTGTCGGATCGGAGAGATGATTCGTACGAATCGAAACCTTCTCGACGCACCAGTTGCTGAAGACGGAGCAAATTGGAGTGTTGGTCAGAGGCAGCTACTTTGTCTGGCCAGAGTTCTCCTCAACAAGAGGAGGATAATCGTATTGGACGAAGCCACAGCATCCATCGACACGGCGACGGAGACCGTAATTCGGGAGACATTACGAGAAGAAACAAAGGGATGCACTGTCATCACCGTCGCTCATCGGATACACACCGTCGTCGAAAACGACTTCATTCTGGTTCTCGACGAAGGTAAAGTGATGGAGTATGATTCGCCGGCCGGACTGCTGGAGAACGAGAATTCATCTTTTTCGAAGTTGGTTGATGAATGCTCGAAGAGATCGTCGAACAAAGACTCGTACAGAGACCGGTCTTGGAGACGAGCAGAGATTAAGCATAAACAGGATCATTCGTCTAGCCAATCAAATTCCAACTCCAGCCAAACTTAG 4410 44.72 MDVGLEIINFAFFVPLLSWVLLKFWRRNRATENGDETHLRNGAVKEFKWLRTITIYSNAIISTLYLSFGCYGYWNYRIIRSKSVASAITWLLATVVTFCSENRNLFEEDKRWPSALVFWWVFSSLYLLASLCIYFLIHLKSIDFPNFLPRANAVDFAAFPLSIIVCFAALAIGCPRKNSEIERSLLQKEGSFSEDDSFTNAGILSKLTFQWLNPLFKRGRIQKLELSHIPPVPPSETAEDAFFLLEESLRRQKMESSSLPEALIHAIRKSLAVTAIFAGSNTIASYMGPFLITNFVDYLLEKSENSSMRYGFILAFIFFFAKTVESLAQRQLYLGTHRAGIRIKVALTVLIYKKSISINYAGPSSGKIVNFINVDVERIGDFCRYVHEIWLLPVQVLLALVILYWNLGAAPSFVALLATLFVMVCNTPLAGVQERMHSKIMEARDSRIKLTSEALKGMRVLKLHSWESTFLKKILELRKTERSWLKRYLYSCSAVAFLFWVSPTLVSVITFGTCIALKAPLTAGSVLSALATFRILQEPIYNLPELISMIAQTKVSVYRIQEFIRSEEDQKRLLHYPSRRQSDIAIDIETGEYSWDMTDLNLKKPAIKISEKIKIMKGYKVAVCGSVGSGKSSLLCSALGEIPRISGTAMKVYGTKAYVPQSAWIQSGTVRDNVLFGKDMNRLFYEDVLEACALNQDIKTWFNGDLTIVGERGMNLSGGQKQRIQLARAVYSDSDIYFLDDPFSAVDAHTGSHLFKARCLCLLQLLSEKTVIYATHQLEFIEAADLVLMEQYNLQVMKNGRIVQTGKYTDLVADSESELARQISAHRNTLNHVNPCKEVSSCPQKPYCYSQIESAEERSGEPLENGEFSARNEEEEAQTGRVKWSVYSGYVTSAFGGALVPVILLCQVLFQALQMGSNYWIAWAAENAGKVSRERLIAIFVLLSGGSSIFIFGRALLLTTVAIETAQRLFLGMIRAVFQAPISFFDSTPSSRILNRSSTDQSTIDTDIPYRLAGLAFALIQLLSIIILMSHRYYITTAREIARMVGIRKTPIIHHFSESISGATTIRCFNQEDRFVTKMLNFIDDYSRVAFHNSTTMEWLCLRINFLFNVVFLFVLIVLVTLPRSAIDPSLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERVLQFTKLPTEAPLTIEDCRPNPDWPSNGRIEIENLHVQYNPSLPMILKGITCTFPGSKKIGIVGRTGSGKSTLIQALFRLVEPSDGRILIDGVDICKIGLPDLRTRLGIIPQDPTLFQGTIRTNVDPPRQHIDREIWEVLDKCRIGEMIRTNRNLLDAPVAEDGANWSVGQRQLLCLARVLLNKRRIIVLDEATASIDTATETVIRETLREETKGCTVITVAHRIHTVVENDFILVLDEGKVMEYDSPAGLLENENSSFSKLVDECSKRSSNKDSYRDRSWRRAEIKHKQDHSSSQSNSNSSQT 1469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31467470 31472652 + BLOR17404 Blo06g00821 62114

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00821 1469 CDD ABCC_MRP_domain1 586 801 - -
Blo06g00821 1469 CDD ABCC_MRP_domain2 1193 1413 - -
Blo06g00821 1469 PANTHER OS01G0902100 PROTEIN 113 1437 - -
Blo06g00821 1469 CDD ABC_6TM_ABCC_D1 273 560 IPR044746 GO:0140359
Blo06g00821 1469 Pfam ABC transporter 613 743 IPR003439 GO:0005524
Blo06g00821 1469 ProSitePatterns ABC transporters family signature. 716 730 IPR017871 GO:0005524
Blo06g00821 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 272 552 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g00821 1469 Gene3D ABC transporter type 1, transmembrane domain 262 568 IPR036640 GO:0005524|GO:0016021
Blo06g00821 1469 Gene3D ABC transporter type 1, transmembrane domain 865 1176 IPR036640 GO:0005524|GO:0016021
Blo06g00821 1469 SUPERFAMILY ABC transporter transmembrane region 902 1175 IPR036640 GO:0005524|GO:0016021
Blo06g00821 1469 SUPERFAMILY ABC transporter transmembrane region 265 568 IPR036640 GO:0005524|GO:0016021
Blo06g00821 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 588 824 IPR003439 GO:0005524
Blo06g00821 1469 MobiDBLite consensus disorder prediction 1433 1469 - -
Blo06g00821 1469 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 113 1437 - -
Blo06g00821 1469 MobiDBLite consensus disorder prediction 1433 1457 - -
Blo06g00821 1469 Gene3D - 1178 1431 IPR027417 -
Blo06g00821 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 902 1158 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g00821 1469 Pfam ABC transporter 1212 1360 IPR003439 GO:0005524
Blo06g00821 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1195 1429 IPR003439 GO:0005524
Blo06g00821 1469 SMART AAA_5 1221 1406 IPR003593 -
Blo06g00821 1469 SMART AAA_5 617 801 IPR003593 -
Blo06g00821 1469 CDD ABC_6TM_ABCC_D2 900 1170 IPR044726 GO:0140359
Blo06g00821 1469 Pfam ABC transporter transmembrane region 1050 1122 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g00821 1469 Pfam ABC transporter transmembrane region 903 1030 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g00821 1469 Pfam ABC transporter transmembrane region 276 539 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g00821 1469 Gene3D - 569 839 IPR027417 -
Blo06g00821 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1187 1424 IPR027417 -
Blo06g00821 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 815 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00821 - - - qsu:111985466 1979.91
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo06g00821 Blo11g00984 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00821 Blo-Chr6:31467470 Blo09g00046 Blo-Chr9:728929 0 dispersed
Blo11g00984 Blo-Chr11:24140665 Blo06g00821 Blo-Chr6:31467470 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1141 . . . . . . . . Cmo04g01910 Cmo18g00707 . Cma18g00720 . Car18g00666 . Cpe09g00569 Cpe01g01598 Bhi07g01868 . . Lac13g0089 Hepe10g1543 . . Cla05g02633 . Cec05g2863 Cco05g2895 Clacu05g2831 Cmu05g2678 . . . . . Lsi04g00654 . . Cme10g00632 Blo06g00821 Blo11g00984 . . . . . . . . . Cma04g01814 . Car04g01826 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006115 0 1 2 1 1 1 2 1 1 1 1 1 1 1 1 1 1 3 2 1 1 2 1 1 1 1 1 2 3 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00821 Blo_Chr06 FPKM 13.619879 18.127201 14.540443 14.476274 11.188368 9.418458 9.607634 10.91373 10.850735 10.809297