Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00822 ATGAACCACGAAGTCCTCAACGACGTTGGAAACAATGTTGGAGTAGAACTCAATGGCAATGTTCTGAGGGTTAAGTACTATGGTTTTCCTGCTGAACAAGCCGAAGTTTTCGATGTTTTGGGAGCTGTAAAGAGAAAAACCGTAATACTTAACCCTCAGAATATCGCCGTTAAACTTTACTCCAGCATTGTTTCTAGCGTCGCCGAGGACTTCGTGGTTCACGGTGAACTCGCTAGAGCATCAGTTGATGACTGCCTGCCAGGAAGGATGCGCGCCTCCAAAATGCAAGGTGAAATGACGTTTCAAATAAAGTGCTATAACAAAGTTTATACTTGCTCGAGAAAGATGGAAAACTGCAAGAGGAGCATCGATTTTGCATCCGACACCTGTCTCACAATGTGCATCAATTTCAATCTCAAACCCTCCGATATCATTTCCAGCTGGGAGGTATACTATCTCAACAGACAATTGGACGGATCGATTGTAGAGAATGTACAGATGGATGGGTTTTTACAACATTTACAAAACGAAAAAGTTGAATCAGTTATTAAAGAGGAGTCAGATTTGCATATTTACTCCAGTAAAGATGTGGACACGATTTTGAATAATGAAGTTGATGATACAATAGAAGAGACTCTTGGAACTCCAAAAGCGGGATCTCCAAACCTAGATCCCGAGTCATTTAGCAACACACCTCACACGAATGGAAACATATTTTCTTCTGGGAAATCATTGAAACATATAACTCCCTTTGGGCGGCGAACGGAAAAGTTTGTTGTCAAATTAAGCATCAATGGTATATCTGATATGGATATAGATAAAAAGGAAGACGACCAAGGACATAGTGAGGATGACGTCATTAGAAAGATTAAACCCTCCACTAGGTGTTCTTTGTTTGTCAATGGTTCAGGTCCAGAACCACATTCGAGATTCATGTATGACAAGATTGAAAATAAGTTTAATGCTCTCGAAAATCGAATAAAAAAGCATACATCTGCATTTGTTGCATCTGGACAGTACGAGGAACCCATGGATCCTACTGTTGCATCAGAGAAAAGCATGTTCACCGTTGGGATGATATGTGGTGATGGAGAGGGCCATTTAAATGATAAAGCCACTCTGTTACAGAGCAGCATCGAGCATTCTGGAGGTCAACGTGTTCGTTTAGAATTACAAAAACTTGGCCAATTTTCGATATTTCCTGGCCAGGTAGTAGGTGTTGAAGGGCATAATCCCAGTGGACACTGCTTGATCGCATCAAAACTGGTTGATTCCATTTCTTCCCACATCACTACTGATGTCAATTTTCCTCCAGCAAAGAAGCTAGCTTTGGATCACAACATTTTTCCGATTGATCAATCTGGTGCTAAGACAGAATTGTTAGTGATGATTGCATCTGGCCCATTTACCACAACAGACAACTTAACGTTTGAGCCGCTGACAGAGCTATTAGCATATGCAAAAAGAAAGCTTCCGCAGCTGTTAGTACTGCTGGGACCTTTTGTTGATTCAGAACATCCGGATATTAAGAATGGAACAGTAGAGCGGAGCTTTGATGAATTATTTAATATAGAAATTGTTGGAAGGTTGGAAGATTACGCAGAACACATGGGTCCTGATGCACAGGTGCTTCTCATTCCATCAATAAGGGATGCCAATCATGATTTTGTTTTCCCACAGCCGGCTTTGGACATTCGTGCATCTGATGTCAGACATCAGATGCATCTTTCTATGATTTTTCTTTGTTCACAAAGTTGGGCATCTCATCAGGTGAAGGTAGGTAGCTCAACGGTGGATATCATTAGACACCTGAGTGGAGAAGAGATGTCAAGAAACCCAACAAAGGGCACATCTACGGATCGCATGGTTCGACTTGCCAGTCATTTACTTCATCAACAAAGGCATGTTATTTTAGTTGCTTCACTGTTGAAAGCATTTCATAGTTGTAAAATTTTGAACAGCTTTTATCCTCTGTATCCACCAAACGAAGGCGTTCCTTTGGATTTGTCACTCGCCCCAGAATCTCTTCACATCTCAGACATTCCAGACATTCTCATCCTTCCTTCAGATATGAAACATTTCATAAAGGTATTGTCTGTTGGAGAAGAAGTAGTGAAGCAATGCTTGTGTGTAAACCCAGGGAGGCTAGCTAAGGGGGAGGGCGGAGGTACTTTTGCAGAGCTTCATTACTTGGGTAGTCCTGAAAAGACCAACGCTTCTATAATTGCCATGGATGAACCGGAAAAACCCTTCAAATCTGTATCATTCTCGACTCCTCTGAAGTCTGAAGGATTTCTAATGCCGCCCAATTCTGTATCTATTAAATCCTCTTCTCCTCTTGCTCATGCTCTGGCTGGCTCTCGTTTTCACTCCGTTGTCTTCTATCTTCACGGCTCATTGAAGACGAAGAAGTAG 2415 41.74 MNHEVLNDVGNNVGVELNGNVLRVKYYGFPAEQAEVFDVLGAVKRKTVILNPQNIAVKLYSSIVSSVAEDFVVHGELARASVDDCLPGRMRASKMQGEMTFQIKCYNKVYTCSRKMENCKRSIDFASDTCLTMCINFNLKPSDIISSWEVYYLNRQLDGSIVENVQMDGFLQHLQNEKVESVIKEESDLHIYSSKDVDTILNNEVDDTIEETLGTPKAGSPNLDPESFSNTPHTNGNIFSSGKSLKHITPFGRRTEKFVVKLSINGISDMDIDKKEDDQGHSEDDVIRKIKPSTRCSLFVNGSGPEPHSRFMYDKIENKFNALENRIKKHTSAFVASGQYEEPMDPTVASEKSMFTVGMICGDGEGHLNDKATLLQSSIEHSGGQRVRLELQKLGQFSIFPGQVVGVEGHNPSGHCLIASKLVDSISSHITTDVNFPPAKKLALDHNIFPIDQSGAKTELLVMIASGPFTTTDNLTFEPLTELLAYAKRKLPQLLVLLGPFVDSEHPDIKNGTVERSFDELFNIEIVGRLEDYAEHMGPDAQVLLIPSIRDANHDFVFPQPALDIRASDVRHQMHLSMIFLCSQSWASHQVKVGSSTVDIIRHLSGEEMSRNPTKGTSTDRMVRLASHLLHQQRHVILVASLLKAFHSCKILNSFYPLYPPNEGVPLDLSLAPESLHISDIPDILILPSDMKHFIKVLSVGEEVVKQCLCVNPGRLAKGEGGGTFAELHYLGSPEKTNASIIAMDEPEKPFKSVSFSTPLKSEGFLMPPNSVSIKSSSPLAHALAGSRFHSVVFYLHGSLKTKK 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31474164 31482091 + BLOR17405 Blo06g00822 62115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00822 804 Gene3D - 445 754 - -
Blo06g00822 804 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 654 740 IPR016722 -
Blo06g00822 804 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 127 634 IPR016722 -
Blo06g00822 804 MobiDBLite consensus disorder prediction 212 241 - -
Blo06g00822 804 Pfam DNA polymerase alpha/epsilon subunit B 462 696 IPR007185 GO:0003677|GO:0006260
Blo06g00822 804 MobiDBLite consensus disorder prediction 222 241 - -
Blo06g00822 804 Coils Coil 313 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00822 Blo-Chr6:31474164 Blo09g00128 Blo-Chr9:3263844 1.23E-19 dispersed
Blo06g00822 Blo-Chr6:31474164 Blo04g00513 Blo-Chr4:4358437 1.72E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00822 K02321 - jre:109019513 801.201