Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00836 ATGGAATCCCCTGAACCTACGGTTGCTGCTCCTTCGTATACAAGAAAGGACTACCAACCAGATACTATTACGGGATTGATAGATTCTCTTGGCACTTTGAACGGTCCAGGCGTCAAAGTATTGGGAGGCTATCCCCGGTACATCTCCTACTGCGTGGAGATGACCCTTCGAGCTCCGGTTGGGTCCCTAATTTGTATACGGACTTCAACGGATCGGGTTCGAAGTATCGATTGGTTTCGGAAGTACTTGGGCTGGAGATCGATCTCCTATTGCTGGTGTTGTTTTGGTAGTTTATGCTTAGAGATGAATCCGCTCTGCTGCATTGCTCCAGTTTCGATCGATCGGGATAGGAGTCCTCACGTGGGAGGAAAATCTTCCAATCAGTGTCATTTAGGTTTCGATGCTCCTATTATAGCAGTTAGCCATGGTTCGAAACCGTGTTTTTCGGGTCAGGTCTCTTCCATTGGTACTGAATCGGAGAGAGCTTCCCTTGCTTTGAACCCAGAAGTCGAGGAGTCAGTTATTGAGTGTAGAGACTCCAAGATGTTCGGTTTCAATGGCGGCCTGAGTGCTAGTGTGGCTGGAATTTTGTACAAGTGGGTGAACTATGGGAAGGGATGGAGGTCTAGGTGGTTCGTGCTTGAAGATGGCGTGCTTTCCTACTATAAGATTCACGGTCCGGATAAGATTTTGATGAGCCCGGCTAGGGAGAAAGGCGTGAGAGTGATCGGAGATGACTCAGTGAGGTTTATGAAGAAGGCAAATTGGGGTAGCACGCAGGTTGGGTCGTTGCCAAAGCAGTGCAAGCCTTTTGGTGCAGTACATTTGAAGGTTTCTTCAGTACGTGCCAGCAAATCGGATGATAAAAGACTTTCCATATTCACTGGGACAAAAACACTTCATCTAAGTTGTTCATCTAAAGAAGACAGATCTTTATGGATTGAATCACTGCTGTCTGCTAAAGAACTTTTCCCTAGAGTGTTGTCTAGCAGTGATTTTCCACGGTCAGAAGACATAGTTATTTCAACAGAAAAACTACGGTCACGACTATTGCATGAAGGTATTGATGAGTTGATCATCAAGGACTGCGAGTCAATTATGCTCTTAGAACTCTCTGAGCTCCAAAACCAGTTGAAATCTCTTCAACATAAGCATGTTTCTCTTTTAGACACGCTGAGGCGATTGGAGGCAGAGAAAATAGAGCTTGAAACTTCTGTCGTAGATGAAACGAAGGCACGGGATTCATTTTGTGGACAAGGGAATAGAAGAATTAGTGATTTTTACTCAGTGATGTCCGAGGGCAGCATGACAGATTTTGAAGCGGAAAATGAAAGTCAGGATGGTGGAGACGCTGAAACAGATGAAGATGATGGAATTTATTTTGACACGAATGATTTCTCATCTTCAGAAGCTTTGAGAAGTGCTTCCTACCGTAGTAGGGAATCCTTGGGAAATACTTGTATACATGATAACTATTTATTTTCTGGTTATCTTCATGGGTCTGAGAAGCAAATCAGGAGAAGAAAATATCCATTTGTTAAAAGAAGAGATAACTTGCCAGAACCAAAGGAGAAAGAGAACCATGTTGGTTTGTGGTCAATTATCAAGGATAATATTGGGAAGGACTTATCTGGAGTTTGTCTTCCTGTTTATTTTAATGAACCCCTTTCTACTTTGCAAAAGTGTTTTGAAGATCTGGAGTACTCATACTTGGTTGATCAAGCACTAGAATTGGGAAAGCAGGGGAATGACTTGATGAGAATTCTAAACATAGCTGCTTTTGCTGTTTCTGGTTATGCTTCAACAGAAGGCAGACTTTGCAAGCCTTTTAATCCACTCCTGGGGGAGACCTATGAAGCCGACTATCCTGACAAAGGGCTGAGATTTTTCTCTGAAAAAGTGAGTCACCATCCGACCATTGTTGCTTGTCATTGTGAGGGAAGAGGCTGGAAATTTTGGGCAGATTCCAATCTTAAAGGGAAGTTTTGGGGAAGATCGATTCAGCTTGATCCTTTGGGAGTCCTTACCTTACAATTTGAGGATGGCGAAACATTTCAATGGAGCAAAGTCACCACTTCTATCTATAATATCATACTAGGTAAAATCTATTGTGATCACTATGGCACAATGCGAATCAGAGGCAGTGGCAATTACTCTTGCAAGCTCAAGTTTAAGGAGCAGTCCATTATAGACCGAAATCCGCATCAGGTCCATGGTTTTGTGCAAGATAATAGAACTGGGGAGAAGGTAGCAATGTTAGTAGGCAAGTGGGATGAAGCAATGTATTATGTGCTGGGAGATTCAACTGGCAAGCCAAAGGGTTATGATCCAACCACAGAAGCTGTATTGCTCTGGGAAAGGGACAAATATTCAACCAAGACAAGATACAATCTCTCTCCTTTTGCGATATCATTAAATGAAGTCACACCTGGCTTGTTGGAGAAATTACCTCCAACTGATTCAAGATTGAGGCCAGATCAAAGACATCTAGAAAATGGAGAATACGAGTTGGCAAATGCTGAGAAGCTAAGACTTGAACAATTACAGAGACAGGCTAGGAAGCTGCAGGAGAGAGGGTGGAAGCCTAGATGGTTTGAGAAAGATGAGGAGGGCTGTTACAGTTACAAGGGTGGATATTGGGATGCAAGAGAGAAGAAGACGTGGGAGGGAATTCCTGACATATTCGATCAGAGTGGTGATTTCCCCTCGTGTCCCGACGAGTAA 2724 43.43 MESPEPTVAAPSYTRKDYQPDTITGLIDSLGTLNGPGVKVLGGYPRYISYCVEMTLRAPVGSLICIRTSTDRVRSIDWFRKYLGWRSISYCWCCFGSLCLEMNPLCCIAPVSIDRDRSPHVGGKSSNQCHLGFDAPIIAVSHGSKPCFSGQVSSIGTESERASLALNPEVEESVIECRDSKMFGFNGGLSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAREKGVRVIGDDSVRFMKKANWGSTQVGSLPKQCKPFGAVHLKVSSVRASKSDDKRLSIFTGTKTLHLSCSSKEDRSLWIESLLSAKELFPRVLSSSDFPRSEDIVISTEKLRSRLLHEGIDELIIKDCESIMLLELSELQNQLKSLQHKHVSLLDTLRRLEAEKIELETSVVDETKARDSFCGQGNRRISDFYSVMSEGSMTDFEAENESQDGGDAETDEDDGIYFDTNDFSSSEALRSASYRSRESLGNTCIHDNYLFSGYLHGSEKQIRRRKYPFVKRRDNLPEPKEKENHVGLWSIIKDNIGKDLSGVCLPVYFNEPLSTLQKCFEDLEYSYLVDQALELGKQGNDLMRILNIAAFAVSGYASTEGRLCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPTIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPLGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIRGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDSTGKPKGYDPTTEAVLLWERDKYSTKTRYNLSPFAISLNEVTPGLLEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKLQERGWKPRWFEKDEEGCYSYKGGYWDAREKKTWEGIPDIFDQSGDFPSCPDE 907
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31592069 31600932 + BLOR17419 Blo06g00836 62129

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00836 907 Coils Coil 364 412 - -
Blo06g00836 907 SMART PH_update 191 324 IPR001849 -
Blo06g00836 907 Coils Coil 838 858 - -
Blo06g00836 907 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 103 899 - -
Blo06g00836 907 Pfam Pleckstrin homology domain 195 317 - -
Blo06g00836 907 Gene3D - 616 787 - -
Blo06g00836 907 SUPERFAMILY PH domain-like 194 326 - -
Blo06g00836 907 SUPERFAMILY Oxysterol-binding protein-like 525 896 IPR037239 -
Blo06g00836 907 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 103 899 IPR000648 GO:0008289
Blo06g00836 907 Pfam Oxysterol-binding protein 531 884 IPR000648 GO:0008289
Blo06g00836 907 Gene3D - 190 324 IPR011993 -
Blo06g00836 907 Gene3D - 827 892 - -
Blo06g00836 907 ProSiteProfiles PH domain profile. 190 322 IPR001849 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00836 K20456 OSBP; oxysterol-binding protein 1 - zju:107428498 1355.89
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01123 Blo-Chr3:37690783 Blo06g00836 Blo-Chr6:31592069 1.41E-42 dispersed
Blo06g00836 Blo-Chr6:31592069 Blo17g00190 Blo-Chr17:1927789 0 dispersed
Blo06g00836 Blo-Chr6:31592069 Blo18g00195 Blo-Chr18:1896298 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g595 . . . . . . . Bma15g00230 . . . . . . Sed01g3038 . Cpe01g01580 Bhi07g01839 Tan04g0129 Cmetu09g0131 Lac13g0113 Hepe10g1564 . . Cla05g02620 Cam05g2807 Cec05g2843 Cco05g2875 Clacu05g2811 Cmu05g2659 Cre05g2775 Cone13ag1096 Cone19ag1086 . . Lsi04g00633 Csa05g02254 Chy10g00824 Cme10g00607 Blo06g00836 . . . . . . . . . . Cma04g01792 . Car04g01807 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010393 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00836 Blo_Chr06 FPKM 29.577114 35.395218 32.476513 33.183182 36.214855 36.046669 34.744621 53.227757 68.757576 64.585175