Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00837 ATGTCGCGAAACCTAGTACCACCTGAGATATTCGATACTCTTCATGACGCTCTCAAGAACAACGGAGCCAAGGTCTTTCTCTGTTGCGACCCTTCTTGCGACGGTCCTAATGATTACCACGTAATCTCGTCAATGGATCATGAAAAGTTTGAAGATCTCCGTGCTAAGGGTTGCAATTTGCTTGGTCCTCAGTGTGTCCTTTCCTGTTCAATGGAACACCGAGCCCTTCCTCAACAAGGTTTTACTTGTTGCCTTGCCATGGATGGTGTAAAAGTGCTTGCATCTGGTTTTCAGGAAGATGAAAAGGTTAAGATAGAGAGGCTAGTGACTGCCATGGGGGGAGTGTTACGCGCTAAAGCATCTTCAGATGTCAGCTTTGTCATTGTGAACAGCGTTTTGGCTGCGAAATACAAGGCTCTTTGCGCTATACATTTGGAAGTTTTCCTTATTATATCAATGAGTGAGATAGACAATTTGGATGCTGCTGTGATAATTTCAGATTCATCAGTTCATTGGGCTTTAAATGTTTTGAAGAAACCAATTGTTACAATTGATTGGTTGTATCAATGCTGGAATGAGCATCGCATTGTCCCTCATAAATCATGCGGAGTTCTGCCTTTCTCTGGATTAACAATTTCTGTCACTAGAATTCCAGCAGATGAGCGCAAGGAGATTGAAAAGCTTATCATGAAAAATGGTGGAAAATATTCTGCGGACCTTACAAAAAAGTGTACACATTTGATATCTCCTGAAGGTGACAAATATAAAGTTGCAAGAACATGGGGCCACATCAACATTGTGACTCGAAAATGGTTTGATCAATCCATTGCTAGAAAAGCATGTTTGAATGAGGAATCGTACCAAGTTTTGTCATCCAATAAAGTTTTTGGGGGTTGCTTAGTGTCTCGACATAACCAGGGGAAGGTCATGTCGCAATCTGAAGCATCAGCATTTGTTGCAGAGTCAAAAATTTCAGCAGTTTCATGTTCTGGATTTGCGGATTCAGATTTAGAAGCTACTCTTTCACAGAAAAAATCTACATTTTTTGAATCTTCTCCACCAACTAGGGAGGGTTGTGATGAAGGGCCCAATACGTTGCCAAAAAATGTACATATAGATAGTTGTGTTGCAGATGACTCCCAATCTGAAGATGGTGACCTGTACTTGTCAGCGTGTAGAATCTCGCTAGTTGGTTTTGAAGCTCCAGAGATGCGTAAACTGGTCAATATGGTTCGTAATGGTGGAGGCTCTCGGTACATGTTGCTCAATGATAAATTAACGCACATAGTAGTTGGAACTCCTTCAGAAATGGAGAAAAAGGAGGTAAGAGACATTGCAGCTTCAGGCATCATTCATGTGGTATGCACAACATGGCTTGAAGATTGTGATTATAAAAAAAAAGAGATTCCTGTTATTAGGAGACACATGGCTTTTGATAAACTTATTCCAAAAGACTCCAACAAAGGAGCTGGGATGGGCATGACCAGTTTAAATCAAAGTAAACTTTCTGTTGGCTTAAGCATATCATCCAACCCAGAAAGCATGAGCTTGAGAGTTGGGGTGTCATCAATGGAGAAAAAAGTAGATGAGAAGATGCAAATCACCATCAGTGGAGAGAGCACTGATGGTGCTACGACAAGAATGTCCAATCAAAATCGAGCTCCTGGTATAGATGGTATAAATAAGGGTCAACCTGCAATGCAGCGTGATTTCACAGTTGAAAATGGAATCTCATCATGTGTATTTAAAGGGAAAACTTTCCAATTTTCAACTTCATTTCCTGACGATAGGAGAGCTGAAATTGTACAATGGGTAACTCAAGGGGGTGGAATGGTCGTTGATGATAACATGATTCAGAATGTGCACTTCCGAATTGAGTGTCATGGTGCGATCCCCAAAAGTGTTGAAGTTCACCAACTTACATATGTGTCCAGCCACTGGATCCGATCCTGTTTGGAGGATGGGAACTTGCTGGATGTTAGAAGACATATACTATATTCTCCCCTTCCCTGCTGCGTTCCTTTGCTGGGGTTTGAAAAGTGTTGGTTTTGTGTTTCACAATACGAGGATAAGGATAGAATACTGCTAAGAAATTTGTGTTTTGTACTCGGAGCAAAGTTTGTGGAGAAATTGACGAAAAAGGTCACTCATTTAGTTTGCAAGTTTGCCAGTGGACCAAAGTATGAAGCTGCTCGTAAATGGGGGATACATTCAATTACATCTGAATGGATATGTGAGTGTGTCAGACAGAATAAGGTTGTTTCTATGGATTCATACAGTCCTAACGAAGTTACAGCTCAAGACCACGAGGCTGGATTGTGCACTACAAGTCAGTTTCCAACACAAGCAGTTAGAATGATATCTGGAGATGGCTCATCCCAGTTTCCTAGTCAACATCAAGACCTAAAAGACTCACTAATGGAAATTGAAAATGTTAGCTATAGAAGAGAGGGCAAAGAATCAAGTTTTTCCAATAAAAAGGCTAGGCTTCTGGAAGATAGCCAAAGTTGTCTGATTCCTTCTGCAAAGAATCTCACCAATTCTATCTCTATTGTGAACGAGGCACAGGATAATGCATCAAAATGTTCAATTGAGGTGATTGCCCCAGATGTTGCTTCTGCAATTGAAGACTTGTTGGAGCAAACTAGTAAGATTTTCTCACCCGAGCATTCGATCATCGGCCAAGATCATTCTGATAGTCACTCAGTTATAGGGTTATCGAAGCATTGGTTAAACAGGACTGAAAGAAAAGATGGCGCCAAGAATCCTTCTGGAGATGGAAGGGCAGGATTATATGACGGGTTTAGTGAAACACAAACTGATTCCCAGGTTGTGGGTTATGAAGAAGATTTGTCAGGAAGGCAAATGCTGATAGACAGAGTTCGAACGCGAAGGTTCAAAGAAGCTAAAAAAAGGCCTAGAATAAGGCAGGCTGCTGTTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTGCTGCTCCATCTCTATCTTGTCTCGAGCTCTGCCATTTGCCAAACCTAAACCCTTCTCACTAG 3033 41.48 MSRNLVPPEIFDTLHDALKNNGAKVFLCCDPSCDGPNDYHVISSMDHEKFEDLRAKGCNLLGPQCVLSCSMEHRALPQQGFTCCLAMDGVKVLASGFQEDEKVKIERLVTAMGGVLRAKASSDVSFVIVNSVLAAKYKALCAIHLEVFLIISMSEIDNLDAAVIISDSSVHWALNVLKKPIVTIDWLYQCWNEHRIVPHKSCGVLPFSGLTISVTRIPADERKEIEKLIMKNGGKYSADLTKKCTHLISPEGDKYKVARTWGHINIVTRKWFDQSIARKACLNEESYQVLSSNKVFGGCLVSRHNQGKVMSQSEASAFVAESKISAVSCSGFADSDLEATLSQKKSTFFESSPPTREGCDEGPNTLPKNVHIDSCVADDSQSEDGDLYLSACRISLVGFEAPEMRKLVNMVRNGGGSRYMLLNDKLTHIVVGTPSEMEKKEVRDIAASGIIHVVCTTWLEDCDYKKKEIPVIRRHMAFDKLIPKDSNKGAGMGMTSLNQSKLSVGLSISSNPESMSLRVGVSSMEKKVDEKMQITISGESTDGATTRMSNQNRAPGIDGINKGQPAMQRDFTVENGISSCVFKGKTFQFSTSFPDDRRAEIVQWVTQGGGMVVDDNMIQNVHFRIECHGAIPKSVEVHQLTYVSSHWIRSCLEDGNLLDVRRHILYSPLPCCVPLLGFEKCWFCVSQYEDKDRILLRNLCFVLGAKFVEKLTKKVTHLVCKFASGPKYEAARKWGIHSITSEWICECVRQNKVVSMDSYSPNEVTAQDHEAGLCTTSQFPTQAVRMISGDGSSQFPSQHQDLKDSLMEIENVSYRREGKESSFSNKKARLLEDSQSCLIPSAKNLTNSISIVNEAQDNASKCSIEVIAPDVASAIEDLLEQTSKIFSPEHSIIGQDHSDSHSVIGLSKHWLNRTERKDGAKNPSGDGRAGLYDGFSETQTDSQVVGYEEDLSGRQMLIDRVRTRRFKEAKKRPRIRQAAVAAVAVAVAVAAAPSLSCLELCHLPNLNPSH 1010
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31605786 31622130 + BLOR17420 Blo06g00837 62130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00837 1010 CDD BRCT 90 190 - -
Blo06g00837 1010 Pfam BRCT domain, a BRCA1 C-terminus domain 579 662 IPR001357 -
Blo06g00837 1010 Gene3D BRCT domain 23 81 IPR036420 -
Blo06g00837 1010 SUPERFAMILY BRCT domain 581 667 IPR036420 -
Blo06g00837 1010 CDD BRCT_TopBP1_rpt2_like 678 751 - -
Blo06g00837 1010 ProSiteProfiles BRCT domain profile. 384 476 IPR001357 -
Blo06g00837 1010 Gene3D BRCT domain 85 205 IPR036420 -
Blo06g00837 1010 Gene3D BRCT domain 371 472 IPR036420 -
Blo06g00837 1010 Gene3D BRCT domain 677 767 IPR036420 -
Blo06g00837 1010 ProSiteProfiles BRCT domain profile. 577 665 IPR001357 -
Blo06g00837 1010 SUPERFAMILY BRCT domain 380 470 IPR036420 -
Blo06g00837 1010 SUPERFAMILY BRCT domain 641 762 IPR036420 -
Blo06g00837 1010 SUPERFAMILY BRCT domain 86 200 IPR036420 -
Blo06g00837 1010 ProSiteProfiles BRCT domain profile. 87 204 IPR001357 -
Blo06g00837 1010 ProSiteProfiles BRCT domain profile. 678 761 IPR001357 -
Blo06g00837 1010 Gene3D BRCT domain 206 289 IPR036420 -
Blo06g00837 1010 SMART BRCT_7 204 279 IPR001357 -
Blo06g00837 1010 SMART BRCT_7 386 466 IPR001357 -
Blo06g00837 1010 SMART BRCT_7 579 655 IPR001357 -
Blo06g00837 1010 SMART BRCT_7 84 194 IPR001357 -
Blo06g00837 1010 SMART BRCT_7 675 751 IPR001357 -
Blo06g00837 1010 MobiDBLite consensus disorder prediction 541 557 - -
Blo06g00837 1010 SUPERFAMILY BRCT domain 175 289 IPR036420 -
Blo06g00837 1010 MobiDBLite consensus disorder prediction 541 562 - -
Blo06g00837 1010 CDD BRCT_TopBP1_rpt2_like 206 279 - -
Blo06g00837 1010 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 1 959 - -
Blo06g00837 1010 Pfam twin BRCT domain 91 139 IPR001357 -
Blo06g00837 1010 Pfam twin BRCT domain 210 271 IPR001357 -
Blo06g00837 1010 Pfam twin BRCT domain 684 743 IPR001357 -
Blo06g00837 1010 Gene3D BRCT domain 576 671 IPR036420 -
Blo06g00837 1010 ProSiteProfiles BRCT domain profile. 207 289 IPR001357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00107 Blo-Chr5:985390 Blo06g00837 Blo-Chr6:31605786 1.19E-06 dispersed
Blo06g00837 Blo-Chr6:31605786 Blo17g00268 Blo-Chr17:2784348 1.34E-07 dispersed
Blo06g00837 Blo-Chr6:31605786 Blo18g00254 Blo-Chr18:2686637 5.48E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00837 K10728 - zju:107421117 1184.47