Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00846 ATGTCGAAACCCTGGGGAGGCATTGGGGCTTGGGCGGCGGAGGCTGAGCGCGAGGAGGCCGAGCAACGGGAGGCGGCGGCAGCGGCTGCTCAAGAGGTGAATCAGAGTTTTCCGAGCCTTAGGGAATCGGTAAGCGCGAAGCCGAGGAAGAAGAAGATGAGTTTGTTCGAGTTCGCGAACAGCCCTTCTGTGGCTTCCAGCTCTGTAGGTGGGATTGGAGAGTATAAAGGCTTGACACCGGAGGAGATGCTTCGTCTTCCTACCGGTCCGAAGGAGCGGTCGGCGGAGGAGATGCAATATAGTCGGTATGGAGGTGGATTTTCATCGTACGGGCGTTCAGGTCCCCCACAGGGTCGGAGTCGGGACCGAGACGATGGCGATGGGTCTTGGGGAGGTGGAAGGAGATCCTACGGTGGATTCGACGAAGAACGGCGAGGTCCTCCTTCTAGGGCTTCCGATTTCGATCAACCTTCTAGGGCGGACGAGGCAGACAACTGGGCATCGGTGAAGAAATCTATTCCGGCATTGGATTCCCGCAGGCAAAACCGATACGGAGCTCTTGATGGTGGTATGGGAGGAGTTTCTCGGGCTGACGAAAATGATAACTGGGGAAGCGGGAAAAAGTCTTTTCCTTCAAGATCCTCTACATTTGGTTCAGGTTTTCGCGATTCTGGCGATTCTGGTCGCTGGAATAGAGGTGGATTTCGCGAGAATGAGGGGGAGAGGCCTAGGTTGGTTTTGAATCCTCCAAAGGGCAATGCCGGTGTCAACTCTGAGGTTAATGAACCTCCAAAGACAAATAAGCCGAATCCATTTGGTGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTCAGAAGGGGTTGGATTGGAAGAAGTTGGATTCAGATATTGATGCAAAAAAAACAAGTAGACCGACAAGTTCTCATTCTAGCAGACCTTCAAGTGCACAATCAAGCAGGTCGGAAGGCCAGGGTATGCAGGGGATAGAAAATGTGTTGAAGCCAAGGCCAAAAGTTAACCCATTTGGAAATGCTAAGCCCAGGGAAGTTTTGCTAGAGGAGAGAGGCAAAGATTGGCGAAAGATGGATCTCGAGTTGGAGCATCGTGCAGTTGAGAGGGTGGAAGCAGAAGAAGAAAGGATGCTGAAAGAAGAGATAGATAATTTAAAGAAAGAACTCAATGATGAATTCAAAGCCAAGGAGAAAAAGGAGGTATTGCAGGGGACTGCTGGAGATCAACCTACTTTACAAGAGATTATTATCACGAAAGAGAGAGAATTGGAATCACTGATCCGAGATTTAGATGACAAAGTTCGCTTTGGGCAGAAGGCTATTGAACGACCAAGCTCTGGAGCTGGTAGGGGTGCTATCCTTGAGAGACCACCTTCTCAATCGGGAAAAGAATCTAGAAGCACTGAGCTAATGGATAGGCCTCACTCACGAGGCAAAGGAGATGATTGGTCAAGGCCTGCAGATGATAGAAGAGGATTTCAAGGTGGCCAGCATAGAGGTTTTTTGGGCAACAGAGACTCTGAGAGGTTCGGATATGATGCATTTTCTTTTCTTGGTGCTTTTCATTTTTCTTAA 1584 49.87 MSKPWGGIGAWAAEAEREEAEQREAAAAAAQEVNQSFPSLRESVSAKPRKKKMSLFEFANSPSVASSSVGGIGEYKGLTPEEMLRLPTGPKERSAEEMQYSRYGGGFSSYGRSGPPQGRSRDRDDGDGSWGGGRRSYGGFDEERRGPPSRASDFDQPSRADEADNWASVKKSIPALDSRRQNRYGALDGGMGGVSRADENDNWGSGKKSFPSRSSTFGSGFRDSGDSGRWNRGGFRENEGERPRLVLNPPKGNAGVNSEVNEPPKTNKPNPFGAARPREEVLAQKGLDWKKLDSDIDAKKTSRPTSSHSSRPSSAQSSRSEGQGMQGIENVLKPRPKVNPFGNAKPREVLLEERGKDWRKMDLELEHRAVERVEAEEERMLKEEIDNLKKELNDEFKAKEKKEVLQGTAGDQPTLQEIIITKERELESLIRDLDDKVRFGQKAIERPSSGAGRGAILERPPSQSGKESRSTELMDRPHSRGKGDDWSRPADDRRGFQGGQHRGFLGNRDSERFGYDAFSFLGAFHFS 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31698070 31700358 + BLOR17429 Blo06g00846 62139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00846 527 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 514 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 137 166 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 78 346 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 1 48 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 305 325 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 281 304 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 229 244 - -
Blo06g00846 527 Coils Coil 371 405 - -
Blo06g00846 527 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 514 IPR010433 GO:0003743
Blo06g00846 527 Coils Coil 12 33 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 469 498 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 443 510 - -
Blo06g00846 527 MobiDBLite consensus disorder prediction 205 222 - -
Blo06g00846 527 Pfam Plant specific eukaryotic initiation factor 4B 1 503 IPR010433 GO:0003743
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00010 Blo-Chr1:191531 Blo06g00846 Blo-Chr6:31698070 4.62E-144 dispersed
Blo06g00846 Blo-Chr6:31698070 Blo19g00091 Blo-Chr19:2324934 5.90E-131 dispersed
Blo06g00846 Blo-Chr6:31698070 Blo04g00556 Blo-Chr4:4800139 3.00E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00846 - - cpap:110817125 575.089