Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00847 ATGGGAACACAATCCTGTTTCGCTCTCACTCTCACTCTCACTCTTACGCTCTCCGTTAGCTTGGTGTTGGCCGGGAAACGAAACCCATGTCATTTTCCGGCCATCTTTAACTTTGGGGACTCAAATTCCGACACCGGCGGCTTATCTGCGGTCTTCGGCCAGGTCGGTCCGCCTGCCGGGGAGACGTATTTCCACCATCCTGTTGGCCGGTACTCTGACGGCCGACTTATCATCGATTTCATCGCCAAGAGCCTTGGACTTCCATATCTAAGCGCCTACCTTGACTCAGTGGGAAGCAACTTCACTCATGGCGCCAACTTTGCCACCGCAGGATCAACCATTAGACCTCAAAACACCACTATTCAACAAAGTGGGTTTAGTCCCATCTCCTTGAATGTCCAATACAACGAATTCTATGATTTCCGTCGTCGAACCCAAATCACTCGTAAACGAGGTGCTTGTGGAGTTTTTGAGCAGCTCATGCCCAAAGAAGAATCTTTCTCTGAGGGATTGTACACCTTTGATATTGGCCAGAATGACTTGACTGCAGGCTATTTTATGAACATGTCTACAACCCAAGTAAAAGCTTATGTTCCAGCCCTTCTTGATCAGTTCAAAACCATCATTAAGAATGTACACTCTCAAGGTGGAAGACATTTTTGGATTCATAATACAGGTCCAGTTGGCTGTCTTCCTTATGTGTTGGATAGGATCCCAGTAAAAGCTTCTGAGATTGACAAATTTGGATGTGCTTCGCCTTTCAACGATGTCTCTCAGTTCTTCAACCATGGTTTGAAGGAATCCGTTGTTCAATTGCGAAATGATTTGCCGGATTCTTCGATCACATATGTTGACGTTTACTCTCTCAAATATGCTCTCGTTAGCCAATACAAAAAACTCGGGTTTGAGGAGCCATTGAAGGCATGTTGTGGGCATGGAGGGAAGTATAACTTCAATATTCACCTTGGATGTGGGGGGAAGATTGAAGTGCATGGGAAAGAGGTATTGGTGGCAAAATCATGCAAAGATCCATCTGTTTATGTGAATTGGGATGGAGTTCATTTCACTCAGGCTGCCAATAAATGGATCTTCGACCGCATCAAAGACGGCTCATTTTCCGACCCACCGATCCCTTTGAAGCGGGCTTGTCGTCCGATTCTGATAGTTCAAGGTCAAAGCTTTCAATTTCTTGAACTTGGTTCCAAGTTTGAGTACGAGCAATGTGTGCTATACTTCTCGGAGTGTTCGAGTTGCGTTGAATTGAATCTCCCTTCCAATGTTTTCCCAAATGTTGATTTCATGAACGTTGATGACAAAAGATCAGGCCTCGCCAACCAAATCTTTCAAAATGCTCCATCTTCCATGAGGAAAGCCGATAGAAATTCAAATCAACCACGAACTTTAAATGACACGTCAAAGATTTGGGTCACTTCAAATCCTAAAGGTGCAGAAAGATTGCCACCAGGAATTGTTTCAGCTTCGTCAGACTTTTATTTACATAGATTATGGGGCAATCCTAGTGAGGATTTAACCATCAAGCAGAAGTATCTTGTGACCTTCACTGTTGGCTACAATCAGCGAGAAAATATTAATAGAGCAGTGAGAAAGTTTTCAGAGAATTTCACAATTCTTCTATTTCATTATGATGGTCGAACAACTGAATGGGATGAATATGAATGGTCAAACCGAGCTATTCATATTAGTGTTGGGAAGCAAACTAAATGGTGGTACGCCAAGCGATTTTTGCATCCTGATGTTGTGGCACCATATGACTACATATTTATCTGGGATGAAGACCTTGGGGTGGAGCATTTTAATGCGGAAGAGTATGTAAAACTACTAAGGAAACATTCCCTAGAGATTTCACAGCCTGGTTTAGATCCTAGTAGAGGAACAACATGGCAGATGACAAAGAGAAGAGGTGATGGTGAAGTTCACAAAGTAACAGAGGAAAAACCAGGATGGTGCTCTGATCCACATCTTCCTCCATGTGCTTCGTTTGTTGAAATCATGGCGCCAGTGTTTTCTCGAGATGCATGGCGATGTGTGTGGCATTTGATCCAGAATGACCTAGTCCATGGGTGGGGTCTTGATTTTGCGCTCAGAAGATGTGTAGACCCAGCATATGAGAAAATAGGAGTTGTAGATGCTCAGTGGATTGTCCATCAAGCTATTCCGTCACTTGGAAGTCAGGGAGAATCTAAAGACGGGAAGCAACCCTGGCAAGGGGTGAGAGAAAGATGCACTAAGGAATGGACGATGTTTCAAAGCCGGTTAGCAAGTGCAGAAACAGCATATTTCACGGAAAGAGGGATCATTCCTCCAGTCTCGACAAAACACTAG 2343 44.0 MGTQSCFALTLTLTLTLSVSLVLAGKRNPCHFPAIFNFGDSNSDTGGLSAVFGQVGPPAGETYFHHPVGRYSDGRLIIDFIAKSLGLPYLSAYLDSVGSNFTHGANFATAGSTIRPQNTTIQQSGFSPISLNVQYNEFYDFRRRTQITRKRGACGVFEQLMPKEESFSEGLYTFDIGQNDLTAGYFMNMSTTQVKAYVPALLDQFKTIIKNVHSQGGRHFWIHNTGPVGCLPYVLDRIPVKASEIDKFGCASPFNDVSQFFNHGLKESVVQLRNDLPDSSITYVDVYSLKYALVSQYKKLGFEEPLKACCGHGGKYNFNIHLGCGGKIEVHGKEVLVAKSCKDPSVYVNWDGVHFTQAANKWIFDRIKDGSFSDPPIPLKRACRPILIVQGQSFQFLELGSKFEYEQCVLYFSECSSCVELNLPSNVFPNVDFMNVDDKRSGLANQIFQNAPSSMRKADRNSNQPRTLNDTSKIWVTSNPKGAERLPPGIVSASSDFYLHRLWGNPSEDLTIKQKYLVTFTVGYNQRENINRAVRKFSENFTILLFHYDGRTTEWDEYEWSNRAIHISVGKQTKWWYAKRFLHPDVVAPYDYIFIWDEDLGVEHFNAEEYVKLLRKHSLEISQPGLDPSRGTTWQMTKRRGDGEVHKVTEEKPGWCSDPHLPPCASFVEIMAPVFSRDAWRCVWHLIQNDLVHGWGLDFALRRCVDPAYEKIGVVDAQWIVHQAIPSLGSQGESKDGKQPWQGVRERCTKEWTMFQSRLASAETAYFTERGIIPPVSTKH 780
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31702321 31711824 + BLOR17430 Blo06g00847 62140

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00847 780 Pfam GDSL-like Lipase/Acylhydrolase 35 367 IPR001087 GO:0016788
Blo06g00847 780 SUPERFAMILY SGNH hydrolase 106 368 - -
Blo06g00847 780 Gene3D SGNH hydrolase 24 370 IPR036514 -
Blo06g00847 780 PANTHER OS06G0731900 PROTEIN 418 771 IPR007877 -
Blo06g00847 780 Pfam Protein of unknown function (DUF707) 478 763 IPR007877 -
Blo06g00847 780 CDD SGNH_plant_lipase_like 33 371 IPR035669 -
Blo06g00847 780 PANTHER LYSINE KETOGLUTARATE REDUCTASE TRANS-SPLICING PROTEIN 418 771 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00847 - - - ming:122080281 605.134
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00847 Blo-Chr6:31702321 Blo10g00435 Blo-Chr10:7972055 0 dispersed
Blo10g00345 Blo-Chr10:5209150 Blo06g00847 Blo-Chr6:31702321 1.10E-93 dispersed
Blo10g00434 Blo-Chr10:7941408 Blo06g00847 Blo-Chr6:31702321 2.76E-119 transposed
Blo11g01042 Blo-Chr11:28263270 Blo06g00847 Blo-Chr6:31702321 0 transposed
Blo15g00234 Blo-Chr15:2463420 Blo06g00847 Blo-Chr6:31702321 2.66E-52 transposed
Blo16g00452 Blo-Chr16:17961636 Blo06g00847 Blo-Chr6:31702321 1.51E-71 transposed
Blo17g00646 Blo-Chr17:15026196 Blo06g00847 Blo-Chr6:31702321 1.23E-37 transposed
Blo01g00383 Blo-Chr1:4374573 Blo06g00847 Blo-Chr6:31702321 1.40E-160 wgd
Blo16g01175 Blo-Chr16:40292995 Blo06g00847 Blo-Chr6:31702321 2.45E-161 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g630 . . . . . . . . . Cmo18g00762 . Cma18g00758 . Car18g00691 . Cpe09g00539 . . . . . . . . . . . . . . . . . . . . Csa05g02281 Chy10g00847 . Blo06g00847 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004340 1 1 1 0 1 1 3 1 1 1 1 1 2 1 1 3 1 4 2 1 1 1 1 1 1 1 1 1 1 6 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00847 Blo_Chr06 FPKM 2.969911 3.143001 5.671793 6.104652 143.247574 128.771606 149.040253 11.384123 10.828796 10.746049