Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00865 ATGTCGATATCTTGTTCTTCTGACTGCTTCTCCGACCTGTTGTGCGACGAGGATTCATCCGGATTCTTGTCCGGAGATTCGCTCGCGTACTCGTCCGAAAGCGATTGTGTTTCGTGCCTCGAGGAGTCGATTGCCGCTTGTATTGAAGAGGAGAGGCAGTTCATACCTGGTTTCGAGTATTTCTCGCAATTTCAGACGAGGTTTCTGGACGCATCTGCTAGAGCGGAATCTGTTGCTTGGATTCTCCTGGTTCAAGCCTACTATGGATTTCATCCATTAACGGCGTATCTATCCGTTAACTACTTGGATCGGTTCCTGTACTCTCGTTGCTTGCCGCAAACAAATGGGTGGCATTTGCAACTTTTATCTGTTGCTTGCTTGTCGCTAGCTGCTAAAATGGAAGAGCCTTTGGTTCCTTGTTTATTGAATCTTCAGGTTGAGGGAGCCAAATATGTATTTGAACCCACAACAGTATGTAGGATGGAGCTTCTTGTCCTAAAAGTCCTGGATTGGCGTTTGAAATCCATAACCCCATTCAATTTTATTGATTTCTTTGCCTTTAAGGTTGATCCAACAGGAGCTTTCGTTGCATTTCTCATCTCAAGAGCATCAGAAATTATCTTATCCAATATTGAAGAAACTAGATTTCTAGAGTACCAGCCATCATGCATAGCTGCCGCAGCTTTGCTTTGTGCTGCAAATGAAATCCCAAATTTACCTATTGTTAATCCTGAAAATGCTGAGTTATGGTGCAATGGATTAAGCAAAGAAAGAATCATCAAATGTTATGGGTTAACACGAGAATTGATGCTTCATAGTGGCTGTAAGAAATCCCCTACAATCTTACCACAGTTTCAAGTTAATCTTCAAGCTGAAATGAGGCTGATTGACTCCTCACCGTCCTCGTCCTCGTCCTCGTCCTCATCCTCGTCCTCGCCCTCGCCCTCGCCCTCGCCCTCGCCCTCGTCTAGTAAAAGGAGAAAATTAAGTAACTGCTTGTGGGTAGTTGATGGCAAAGGAAACTGA 1026 44.35 MSISCSSDCFSDLLCDEDSSGFLSGDSLAYSSESDCVSCLEESIAACIEEERQFIPGFEYFSQFQTRFLDASARAESVAWILLVQAYYGFHPLTAYLSVNYLDRFLYSRCLPQTNGWHLQLLSVACLSLAAKMEEPLVPCLLNLQVEGAKYVFEPTTVCRMELLVLKVLDWRLKSITPFNFIDFFAFKVDPTGAFVAFLISRASEIILSNIEETRFLEYQPSCIAAAALLCAANEIPNLPIVNPENAELWCNGLSKERIIKCYGLTRELMLHSGCKKSPTILPQFQVNLQAEMRLIDSSPSSSSSSSSSSSSPSPSPSPSPSSSKRRKLSNCLWVVDGKGN 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31916799 31918866 + BLOR17448 Blo06g00865 62158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00865 341 Gene3D - 47 236 - -
Blo06g00865 341 MobiDBLite consensus disorder prediction 297 313 - -
Blo06g00865 341 Pfam Cyclin, C-terminal domain 176 274 IPR004367 -
Blo06g00865 341 Gene3D - 57 174 - -
Blo06g00865 341 Pfam Cyclin, N-terminal domain 45 173 IPR006671 -
Blo06g00865 341 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Blo06g00865 341 SMART Cyclin_C_2 176 315 IPR004367 -
Blo06g00865 341 PANTHER CYCLINS 7 308 IPR039361 -
Blo06g00865 341 MobiDBLite consensus disorder prediction 297 341 - -
Blo06g00865 341 PANTHER CYCLIN-D1-1 7 308 - -
Blo06g00865 341 CDD CYCLIN 74 166 IPR013763 -
Blo06g00865 341 SMART cyclin_7 79 167 IPR013763 -
Blo06g00865 341 SUPERFAMILY Cyclin-like 34 173 IPR036915 -
Blo06g00865 341 SUPERFAMILY Cyclin-like 157 264 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00865 Blo-Chr6:31916799 Blo11g00015 Blo-Chr11:137462 2.87E-51 dispersed
Blo11g00878 Blo-Chr11:17153410 Blo06g00865 Blo-Chr6:31916799 8.19E-168 wgd
Blo16g01148 Blo-Chr16:40010602 Blo06g00865 Blo-Chr6:31916799 3.66E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00865 K18810 - csv:101210686 414.846