Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00875 ATGGCGGCGTTAGCTCCTGGAATTCTGTTGAAGCTTTTGAACGGAATGAATACCGGAACGAAGGTCACGGGTGAGCATCGCAGCTCGCTTCTTCAGGTCACTGACATAGTTCCGGCAGATCTTGATGAGAAAAACCTCTGGCCAAATCACGGTTTCTACCTCAAGGTTTCCGATTCTTCTCATTCTATCTACGTCAGTTTACCTTCTGAACAAGACGATTTCGTTCTAAGCAACAAAATGCAGCTGGGTCAGTACATTTATGTTGAAAAACTAGAACCTGGATCGCCGGTTCCTGTCATTAGAGGAGCTAAGCTACTTCCGGGACGGCACCCTCTGATTGGAACGCCTGAACCGATAATGGGTCTTAGAGAGAAGAGAGAGGTAACTCAGAGGAGGGGATCATGGGGGAAAGGGAGAAATGGGGAAGATGTATTCTCGTCGTTTTCATCTCCAATGGCCCTGAAGTCTGTTCCTTTGAATTTCGATCACTGTACTCCGGTGAAAGAACGAGGGAAGATCAGAATCGACGGGAGCTCCGGAGGTAGTGTTAGGAGTTCTTATTATGGTGGTGGATTATTGGCTAAAATGGCGGAATCGAAGGGAGAAAGTCCTGGTTTGATGAGAAAAAGCTGCATCGCTTCTTCATCAGCATCGAAAATTCCCAGAAGCAAGAGTGTTAATGAAAGATATAGAAGGATTCCAATAATTCCCTGCAACTTATCTGAGAAGAAAAGCTCAACTCCACCTCCAAGTTTGAGGAACGAAAGAGCCTCCATTTTCTCAAAAATGGAGGGCGATGCTCAGAAATCTGCAATTCAGCAACCGAAATTGCAATCTCAGTCTGGTAACTTAGCCTCCCGAGACAGCACCGGTCTCCCCATGAATTTACCAGGAAAGCTTAGCATCCTCGGCAAGGAAGCTATGCAGCAGAGCGAAGCAGCTCAGAAGATCGCTCTACAAGCACTGAGATATGCATCAGCCTCCGACACATTAATTCGATCTCTCAAGATGTTTTCAAACTTGAGCAAAAACTCAAGAACGGATTCTCCGGCAGCTTGTTTCGACGAATTCTTAGAATTTCATCAGCAAATCGCGCAGGCTCTCACTGATATGCTGTCAATTCAAGTTGCTACTTCAGCATCAGAAGTCGCTATAAACAACCCATCTGAAGCAACGGCCCCAATCTTACAGGAAATCACTCACAAACGATCTCCCATGCCCAAATCAGTATCAGAATTCCCCGGAAAACAAGAGCAGAAGACGCCGATCAGAAAATTTCCAAGAACAGCTACAACAATCGGGGAGAACGACGAAAATAAGAAGCCATCATCATGGCCAGCGAGTTGCTGCAGCTTGAGCAACACGATCAGATTGGGGAAGCAGATCGAAACCGAAGCAGGCCACTGGTTCATGGAGTTCGTGGAGAAGGCATTGGAGAAAGGAATGAAGAGGAGGAGAAGTGGAGAAGAAGATGGTAGTAGAAAAGTCGGGCAGTCTCTGATAATCAAAGTGATAAACTGGGTTGAGGTTGAGCAGAGCGATTGCAGGAAGAGGCCTGTTCATCCAAAAGCTGCGCAGATTGCAAGAAAACTGAGGATCAAGATGAAAAACCCATGA 1617 46.26 MAALAPGILLKLLNGMNTGTKVTGEHRSSLLQVTDIVPADLDEKNLWPNHGFYLKVSDSSHSIYVSLPSEQDDFVLSNKMQLGQYIYVEKLEPGSPVPVIRGAKLLPGRHPLIGTPEPIMGLREKREVTQRRGSWGKGRNGEDVFSSFSSPMALKSVPLNFDHCTPVKERGKIRIDGSSGGSVRSSYYGGGLLAKMAESKGESPGLMRKSCIASSSASKIPRSKSVNERYRRIPIIPCNLSEKKSSTPPPSLRNERASIFSKMEGDAQKSAIQQPKLQSQSGNLASRDSTGLPMNLPGKLSILGKEAMQQSEAAQKIALQALRYASASDTLIRSLKMFSNLSKNSRTDSPAACFDEFLEFHQQIAQALTDMLSIQVATSASEVAINNPSEATAPILQEITHKRSPMPKSVSEFPGKQEQKTPIRKFPRTATTIGENDENKKPSSWPASCCSLSNTIRLGKQIETEAGHWFMEFVEKALEKGMKRRRSGEEDGSRKVGQSLIIKVINWVEVEQSDCRKRPVHPKAAQIARKLRIKMKNP 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32044726 32046725 - BLOR17458 Blo06g00875 62168

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00875 538 Pfam Plant protein of unknown function (DUF936) 4 267 IPR010341 -
Blo06g00875 538 Pfam Plant protein of unknown function (DUF936) 261 379 IPR010341 -
Blo06g00875 538 MobiDBLite consensus disorder prediction 264 293 - -
Blo06g00875 538 PANTHER OS01G0108800 PROTEIN 1 538 - -
Blo06g00875 538 MobiDBLite consensus disorder prediction 203 225 - -
Blo06g00875 538 PANTHER EXPRESSED PROTEIN 1 538 IPR010341 -
Blo06g00875 538 MobiDBLite consensus disorder prediction 267 290 - -
Blo06g00875 538 MobiDBLite consensus disorder prediction 209 223 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00875 - - - rcu:8276467 657.521
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00397 Blo06g00875 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00875 Blo-Chr6:32044726 Blo07g00795 Blo-Chr7:25679229 1.32E-47 dispersed
Blo15g00477 Blo-Chr15:7761640 Blo06g00875 Blo-Chr6:32044726 2.53E-72 transposed
Blo01g00397 Blo-Chr1:4497687 Blo06g00875 Blo-Chr6:32044726 3.39E-165 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g722 Blo01g00397 . Bda01g02223 . . Bpe10g00837 . Bma15g00187 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo06g00875 . . . . . Bma01g00051 . . . . . Cma05g00006 . Car05g00005 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009038 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 34