Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00894 ATGTGTCGCAAGCGCGAAAAGCCCTTCTTCTCCCGCCATCTCTCCGTCTCCGCAGCCAAGAGGCGCCGCCCTTTGCCGCCGCCATCTCCGCTTCCAGAGGAAGACATCGACAAGCCAACGTTCAAACCTGCTCCTCCGCCTGCCTTAATGGTGGTCGGTCTACCGCAAGATTGCTCGGTGCTTGATCTCAAATCTCGATTCGAGATCTACGGTTCCATATCCCGCATTCGCATCGACCGCGATGGTGTTGGGTATCTCACTTATCGCACCAAAGAATCGGCTGATGAAGCCGTTGCCGCTAGCCTCGATTCTTCCTTCGGCATCACCGTAGACTCCAAAAAGGTGCAGGTATTGTGGGCGACTGATCCCCTAGCTCAGTGGAGGCAAGGGATTAACGTTGGTATTAATCAAGATAATGGGTCATCTTCCAAGCTTCTGAGAGGAGAGGTACCTCTGAGCAGGCGTGGAAGAGGTAGTAAACTTGCCTCAACCGTTGTGAATCCCGGAAACAGCGGTAATACTTCCCGGTCAGAAGTTGCTCTCAAAGGGAGAGAAATTGTCGCATATGATGATATTCTGTGA 582 52.58 MCRKREKPFFSRHLSVSAAKRRRPLPPPSPLPEEDIDKPTFKPAPPPALMVVGLPQDCSVLDLKSRFEIYGSISRIRIDRDGVGYLTYRTKESADEAVAASLDSSFGITVDSKKVQVLWATDPLAQWRQGINVGINQDNGSSSKLLRGEVPLSRRGRGSKLASTVVNPGNSGNTSRSEVALKGREIVAYDDIL 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32144447 32145418 - BLOR17477 Blo06g00894 62187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00894 193 SUPERFAMILY RNA-binding domain, RBD 24 130 IPR035979 GO:0003676
Blo06g00894 193 MobiDBLite consensus disorder prediction 1 42 - -
Blo06g00894 193 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 122 IPR000504 GO:0003723
Blo06g00894 193 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 49 99 IPR000504 GO:0003723
Blo06g00894 193 SMART rrm1_1 48 118 IPR000504 GO:0003723
Blo06g00894 193 CDD RRM_SF 49 117 - -
Blo06g00894 193 Gene3D - 32 176 IPR012677 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00894 - - bhj:120081339 264.618