Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00911 ATGGGTTCTCTCTGTTGTGTGGCTGCTAGGACACATGGACCCAATACGGCCAGTAGGGACTGGTCTGTCGGTCCCCGTGAGCCTTTTTGGCGGACTAATTCAAGCTTTTCACCACCACCTCCAAGATGGGATTTCCAATTCCAATCTGAAGCCTTGCAATATGGTGTACATGATGGAGTTCCATTATATGGTTCTTCTACGTCTTCTAACAGTAAAGACAGTAGGAGCTGGGCTAGAGGCAACAATCTCTATAATCACCAGTATTCTGCATCGGAAGGTCCTGATCCTGCTTTGGGGCTATTTTCCACGAGGCGTAAGACAGAGGGAACCTTAGATAATGTGGCAAGCGAAAGTGTGAGTTCATCAAACTCAGAAAGTAGCGAGTCTGAACCTTCAGTAAAGTTGAAATTATCCTCCCATTGGAACTTCTCAAGTCGACAATCTTTCATGTCCAAACCTATCCATCCCTTGTCTCTATCTACATTCTCTCCCATTGGAGAACCTTTTAACTCCACACTCACAAAATTCGCAGAGTTAGATTCCACGAATCCTCAAGGAGATAGGCACAGATGGAGCAGTGGAAGTAGCAGCATTGATTTTGCTGACGTTTCTGAGCCATTTGAGTTGGAAATTTTTAATCAATCTAGTACTCAATCTGCTGGAGTTAGGTGTGGTTTGTGTGAAAGATTTCTTTCGCAAAGATCGCCTTGGAGTTCTAGACGGATTGTTCGAAGTGGTGATATGCCAGTTGCCGGAGTTCTCTCTTGCTGCCATGTTTTTCATGCTGAATGCTTGGAGCAAATGACGCCAAAGACACTAAGAAACGACCCACCATGCCCTCTTTGTCTAAAAAATGACGATAATTACTGTCCTGACCAAAAATCCACCTGGAGATTGAAGAATACCCCACCAAAGCGTCGACCATTTAGCGAAGATGGGCCGTCGAGACCTTGGGGCTGTGCACATGTCGGAGACTGCGTTGAAGGTGCATTACACGCTCCCCAAAACAATACTATGTTCTTACTTAACCGAAATTGTGGAAAGATGAGTCTGTCTTTGAAGGGAAGCAAAGAATTTCCTGGTAAGTTGAAGAAAAGTGGGTCGTTTTCATCCCATCCCGTCAGCTCAAGATCATGTGACCATGGACCAAGGAAGAGTGATGGATTGGAAAGGGATGTGCAAGAAGGGGAGGGCCATCATTCTCTTTCATGCATTCATGGTCTGATTAAGGGTGTCGTCGGAGTCGCTCAAGATTACTCCTTTTCGAATAAGGAGTCTCCTTTTCGGATATCGAATGTAAAATGGAAAATGGAAGTCGCCCTGTTTTTGGTGGTGGGTTTTCTTGCTGCACTCGTCTCTTCTGCAAAAGGGCAGAGTGGAGGAGGATGGAGCAATGCCCATGCAACCTTTTATGGAGGTGGTGATGCTTCTGGTACCATGGGGGGGGCTTGTGGGTATGGAAATCTGTACAGCCAAGGGTATGGGACAAACACAGCAGCTTTGAGCACGGCCCTGTTCAATAGTGGTCTGAGCTGTGGGTCTTGCTACGAGATTAAGTGCGTAAATGACGACAACTGGTGCCTGCCAGGCTCAATAGTGGTCACAGCCACCAACTTTTGCCCGCCAAACAGCGCCCTCCCTGACAATGCAGGCGGCTGGTGTAACCCTCCCCAGCAGCATTTTGATCTCTCTCAGCCTGTTTTTCAGCACATTGCTCAGTACAAGGCTGGAATTGTGCCTGTCTCCTATAGAAGAGTGGCCTGCACGAGAACGGGAGGAATAAGGTTCACAATCAACGGCCATTCCTATTTCAACCTAGTCCTCATCACCAACGTCGGCGGAGCTGGTGACGTCAATGCAGTCTCCATCAAAGGCTCAAATACCGGCTGGCAAACCATGTCAAGAAACTGGGGCCAAAACTGGCAGAGCAACTCCAACCTAAACGGCCAGTGCCTGTCATTCAAGATCACCACTAGCGACGGCCAAACCATCATCTCAAACAACATCACTCCGGCCGACTGGTCCTTCGGCCAGACCTTTAGTGGTAGCCAATTCAGCAATTGA 2064 47.72 MGSLCCVAARTHGPNTASRDWSVGPREPFWRTNSSFSPPPPRWDFQFQSEALQYGVHDGVPLYGSSTSSNSKDSRSWARGNNLYNHQYSASEGPDPALGLFSTRRKTEGTLDNVASESVSSSNSESSESEPSVKLKLSSHWNFSSRQSFMSKPIHPLSLSTFSPIGEPFNSTLTKFAELDSTNPQGDRHRWSSGSSSIDFADVSEPFELEIFNQSSTQSAGVRCGLCERFLSQRSPWSSRRIVRSGDMPVAGVLSCCHVFHAECLEQMTPKTLRNDPPCPLCLKNDDNYCPDQKSTWRLKNTPPKRRPFSEDGPSRPWGCAHVGDCVEGALHAPQNNTMFLLNRNCGKMSLSLKGSKEFPGKLKKSGSFSSHPVSSRSCDHGPRKSDGLERDVQEGEGHHSLSCIHGLIKGVVGVAQDYSFSNKESPFRISNVKWKMEVALFLVVGFLAALVSSAKGQSGGGWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEIKCVNDDNWCLPGSIVVTATNFCPPNSALPDNAGGWCNPPQQHFDLSQPVFQHIAQYKAGIVPVSYRRVACTRTGGIRFTINGHSYFNLVLITNVGGAGDVNAVSIKGSNTGWQTMSRNWGQNWQSNSNLNGQCLSFKITTSDGQTIISNNITPADWSFGQTFSGSQFSN 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32384409 32395480 - BLOR17494 Blo06g00911 62204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00911 687 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 481 593 IPR007112 -
Blo06g00911 687 Gene3D - 449 589 IPR036908 -
Blo06g00911 687 MobiDBLite consensus disorder prediction 111 131 - -
Blo06g00911 687 PANTHER EXPANSIN-A15 444 685 IPR002963 GO:0009664
Blo06g00911 687 ProSiteProfiles Zinc finger RING-type profile. 224 282 IPR001841 -
Blo06g00911 687 Pfam Expansin C-terminal domain 594 671 IPR007117 -
Blo06g00911 687 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 285 IPR013083 -
Blo06g00911 687 MobiDBLite consensus disorder prediction 294 315 - -
Blo06g00911 687 SMART dpbb_1 498 583 IPR007112 -
Blo06g00911 687 MobiDBLite consensus disorder prediction 378 393 - -
Blo06g00911 687 SUPERFAMILY Barwin-like endoglucanases 447 611 IPR036908 -
Blo06g00911 687 MobiDBLite consensus disorder prediction 361 393 - -
Blo06g00911 687 SUPERFAMILY PHL pollen allergen 590 681 IPR036749 -
Blo06g00911 687 Gene3D - 593 685 IPR036749 -
Blo06g00911 687 SUPERFAMILY RING/U-box 223 286 - -
Blo06g00911 687 Pfam Lytic transglycolase 498 583 IPR009009 -
Blo06g00911 687 PANTHER EXPANSIN 444 685 - -
Blo06g00911 687 PRINTS Expansin signature 520 531 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin signature 551 568 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin signature 532 542 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin signature 639 660 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin signature 568 581 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin signature 493 507 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin signature 604 625 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin signature 592 604 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin signature 668 684 IPR002963 GO:0009664
Blo06g00911 687 PRINTS Expansin/Lol pI family signature 480 498 IPR007118 GO:0005576
Blo06g00911 687 PRINTS Expansin/Lol pI family signature 502 520 IPR007118 GO:0005576
Blo06g00911 687 PRINTS Expansin/Lol pI family signature 576 592 IPR007118 GO:0005576
Blo06g00911 687 PRINTS Expansin/Lol pI family signature 630 644 IPR007118 GO:0005576
Blo06g00911 687 PRINTS Expansin/Lol pI family signature 462 477 IPR007118 GO:0005576
Blo06g00911 687 PRINTS Expansin/Lol pI family signature 668 682 IPR007118 GO:0005576
Blo06g00911 687 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 603 682 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00911 Blo16g01112 CCT
Blo06g00911 Blo16g01112 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00522 Blo-Chr4:4520810 Blo06g00911 Blo-Chr6:32384409 1.24E-17 dispersed
Blo06g00911 Blo-Chr6:32384409 Blo15g00315 Blo-Chr15:3642505 2.26E-133 dispersed
Blo13g00544 Blo-Chr13:27306284 Blo06g00911 Blo-Chr6:32384409 1.09E-16 dispersed
Blo10g00137 Blo-Chr10:1545841 Blo06g00911 Blo-Chr6:32384409 4.02E-128 wgd
Blo16g01112 Blo-Chr16:39592483 Blo06g00911 Blo-Chr6:32384409 1.21E-143 wgd
Blo17g00731 Blo-Chr17:22268891 Blo06g00911 Blo-Chr6:32384409 4.67E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00911 - - mnt:112093970 474.552