Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00918 CAAGCTATGGAAGAAGAGTCGAATACTAGCAAGAAATGCAAACCCAGAACAGGGAGTTTCAAAGGGAGGAATACGAATAATCTTCATGAATATCAGAATCGGAATCGTCAGCTTCTTCCATACTCAAGTCATAATGGGTTTGATTATCAGAATCAGTATATAAGATACTACCCAGTTTTTCTTCCTCTTCCTTCTCCAATCCCTCTCCATCTTGCTTTACCCCCACCTCCTCCTCAGAATCAAAGCTTTTGGAAAAATACCCATTTGCAGAAACCTTCATGTAAGCTCGATGCTCCTCCTTTAATGGCGGCTCCTGATACCCATCTTCCCATAGTCAAAGTTTCCCCAGAAGGAGAAATAGGAAGACTCGGTGAAAGGAAAATGGAGGTGATAATGGCGGCAAAGAGACCGGATCCAGGTGGCGTGGAAGGGTCTGTAATTTCTCTCCTGGCAAACCATTTTCTAGTTCGGTTCGATCCTCTTCAGAAAATATTCCATTACGATGTTGAAATCTCTCCAAATCCCTCAAAGGAAATCTGCAGATTGATCAAACAGAAGTTGGTGGAAGAAAACTCTGCTTTGCTTTCTGGAGCTTCTCCTGCTTACGATGGCCGTAAAAATCTTTACAGTCCAGTTGAATTCTATAAAAACAGACTGGATTTCTACGTGAATCTCCCGATTCCTACTACCAAAATGACGATTTCAGAAGAAGAATCGAATAATGTCCAATCGAAAAACCAGAAACAGCTGAAAATGTTCAGAGTAAACATCAGGCTTGTATCAAAGCTCGAAGCGAAAGAGCTAAGTGAATACTTGAGCAAAAATGGCGATAATTGCATCCCACTTCCTCAAGATTACCTCCATGCTTTAGATGTCGTACTGAGGGAAAGCTCGGTTGAGAAAAGTATTCAAGTCGGTCGATCGCTTTATTCGAAATCAATGTGGGGATGTGAAGAAATTGGTGGTGGAGCTGTTGGATTGAGAGGCTTTTTTCAAAGCCTTCGTCCTACTCAGCAAGGTCTAGCCATGAATGTGGATTGCTCAGTCACCGCCTTCCATGAAAGTATTGGAGTAATTCCATATCTGCAGAAACGCCTCCACTTTCTCCGAAGCCTCTCAAAAACTACAGATTTAAGCTGTCATGAAAGAAGAGAAATCGAAAAGGCGTTGAAGAACATTCGGATTTTTGTTTGTCATAGAGAAACTGTTCAGAAATATAGAGTTTACGGATTGACAGAGGAAACTACTGAAAATTTATGGTTCCCTGATAGAAATGGGAAGAATTTGAGGCTAGTGAATTATTTTAAGGATCATTATGATTATGAAATACAATTTTTAAACTTACCCTGCTTGCAGATTAGTAGAAGTAAACTTTGTTATCTTCCCATGGAGCTTTGTGTTATCTGCGAGGGCCAGAAATTTCTCGGTAAGCTTTCCGACGATCAGACTGCGAGAATTCTTAAAATGGGCTGTCAAAAACCTAAGGAAAGGAAAGCCGTTATCGACAGAATTATGCAAGCACCTTCAGGGCCGGCAAGTGGTGGAAGGGAATTCAAGCTTCAAGTTTCGACGGAAATGACACGACTGAAAGGCCGAATTTTGCAGCCTCCAAAGCTTAAGCTCGGCGATGGAGGAAATATTCGGGATCTTATCCCTTCACGCCATGATCGTCAATGGAACCTATTCGACTGTCATGTATTTGAAGGAACGAGAATCGAAAGGTGGGGTTTGATTAGTTTTGGTGGAACTCCTGATCAGAAATCAAACATAATGAAATTTATACACCAGCTATCGAAAAGGTCCGAGGAATTGGGTATTTTTCTGAGCAAAAACACAGTCGTTGGCCCTCAATTTGAACCGACAAAGGTCCTCAACAACGTGACCGTTTTGGAATCCAAACTCAAGAAAATTCATAGACTTGCATCGAGAAATTTGCAGCTCTTGATATGCGTGATGGAGCGAAAACACAAAGGATATGCAGATTTGAAGCGAATTGCAGAGACGAATATTGGTGTAGTTAGTCAATGCTGTTTATACCCAAATCTCAGCAAGCTGAGCTCTCAATTTCTAGCCAATTTAGCTCTCAAAATCAACGCAAAAGTCGGGGGCTGCACGGTTTCTTTGTTCAATCCATTACCGTCTCAGATTCCTCGACTTTTCGGGTCTAACGAACCGGTTATCTTCATGGGTGCTGATGTAACTCATCCTCACCCTTTAGACGATTTTAGCCCCTCGGTTGCTGCTGTAGTTGGAAGCATGAATTGGCCTGCAGCCAATAAGTATATATCGAGAATGCGATCTCAAACCCATCGGCAAGAAATCATTCTCGATCTGGCAAAGATGGTTGAAGAATTGCTTGAGGAATTTCGCCAATCGGTAAATGAATTTCCGAGGCGAATTATATTCTTTCGAGACGGAGTAAGCGAGACCCAATTCTACAAAGTTCTTACAGAAGAGTTGCAGGCTATCAAAAAGGCTTGTTCTAGATTTCCAAACTATAAACCGCCAATTACATTTGCAGTAGTTCAGAAGAGGCATCACACGAGGCTGTTTCCGCTCAAAATCGACCCATTTTTTAACCAAAACCAGTGTTTCGATGAAAATATTCTGCCGGGAACTGTGGTCGATACGGTAATTACCCACCCGAAAGAGTTTGATTTCTTTTTGTGCAGCCATTGGGGGATGAAGGGGACTAGCCGGCCTACACATTACCATGTGCTCTGGGATGAAAACGAGTTCACATCCGATGAGCTTCAGAAATTGGTTCATAATTTGTGCTACACCTACTCAAAATGCACTAAGCCTGTATCCTTGGTGCCTCCTGCTTATTATGCACACCTCGCCGCATATAGAGGCCGGCTTTATCTTACACAACCCGATTCAAATTCAACCATCTCCAGAGCGGCTCCTCCGAAGGCTACTCCGCTACCTGAACTCAGTGAAAATGTGAAGAAACTAATGTTTTATTGC 2970 42.36 QAMEEESNTSKKCKPRTGSFKGRNTNNLHEYQNRNRQLLPYSSHNGFDYQNQYIRYYPVFLPLPSPIPLHLALPPPPPQNQSFWKNTHLQKPSCKLDAPPLMAAPDTHLPIVKVSPEGEIGRLGERKMEVIMAAKRPDPGGVEGSVISLLANHFLVRFDPLQKIFHYDVEISPNPSKEICRLIKQKLVEENSALLSGASPAYDGRKNLYSPVEFYKNRLDFYVNLPIPTTKMTISEEESNNVQSKNQKQLKMFRVNIRLVSKLEAKELSEYLSKNGDNCIPLPQDYLHALDVVLRESSVEKSIQVGRSLYSKSMWGCEEIGGGAVGLRGFFQSLRPTQQGLAMNVDCSVTAFHESIGVIPYLQKRLHFLRSLSKTTDLSCHERREIEKALKNIRIFVCHRETVQKYRVYGLTEETTENLWFPDRNGKNLRLVNYFKDHYDYEIQFLNLPCLQISRSKLCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQKPKERKAVIDRIMQAPSGPASGGREFKLQVSTEMTRLKGRILQPPKLKLGDGGNIRDLIPSRHDRQWNLFDCHVFEGTRIERWGLISFGGTPDQKSNIMKFIHQLSKRSEELGIFLSKNTVVGPQFEPTKVLNNVTVLESKLKKIHRLASRNLQLLICVMERKHKGYADLKRIAETNIGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVSLFNPLPSQIPRLFGSNEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPAANKYISRMRSQTHRQEIILDLAKMVEELLEEFRQSVNEFPRRIIFFRDGVSETQFYKVLTEELQAIKKACSRFPNYKPPITFAVVQKRHHTRLFPLKIDPFFNQNQCFDENILPGTVVDTVITHPKEFDFFLCSHWGMKGTSRPTHYHVLWDENEFTSDELQKLVHNLCYTYSKCTKPVSLVPPAYYAHLAAYRGRLYLTQPDSNSTISRAAPPKATPLPELSENVKKLMFYC 990
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32438208 32441776 + BLOR17501 Blo06g00918 62211

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00918 990 Gene3D paz domain 349 474 - -
Blo06g00918 990 MobiDBLite consensus disorder prediction 13 28 - -
Blo06g00918 990 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 112 989 - -
Blo06g00918 990 Gene3D - 721 990 IPR036397 GO:0003676
Blo06g00918 990 SMART PAZ_2_a_3 363 492 IPR003100 GO:0005515
Blo06g00918 990 SUPERFAMILY Ribonuclease H-like 633 955 IPR012337 -
Blo06g00918 990 Pfam Piwi domain 648 953 IPR003165 GO:0003676
Blo06g00918 990 MobiDBLite consensus disorder prediction 1 28 - -
Blo06g00918 990 CDD PAZ_argonaute_like 358 469 - -
Blo06g00918 990 ProSiteProfiles Piwi domain profile. 647 957 IPR003165 GO:0003676
Blo06g00918 990 ProSiteProfiles PAZ domain profile. 366 470 IPR003100 GO:0005515
Blo06g00918 990 SUPERFAMILY PAZ domain 350 506 IPR036085 GO:0005515
Blo06g00918 990 Gene3D - 533 709 - -
Blo06g00918 990 Pfam PAZ domain 371 486 IPR003100 GO:0005515
Blo06g00918 990 SMART Piwi_a_2 647 957 IPR003165 GO:0003676
Blo06g00918 990 Pfam Argonaute linker 1 domain 304 353 IPR014811 -
Blo06g00918 990 PANTHER PROTEIN ARGONAUTE 7 112 989 - -
Blo06g00918 990 CDD Piwi_ago-like 516 956 IPR045246 -
Blo06g00918 990 Pfam N-terminal domain of argonaute 147 294 IPR032474 -
Blo06g00918 990 SMART DUF1785_2 303 355 IPR014811 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00918 K11593 ELF2C, AGO; eukaryotic translation initiation factor 2C - qsu:112006217 1499.18
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00918 Blo-Chr6:32438208 Blo13g00109 Blo-Chr13:2042432 0 dispersed
Blo06g00918 Blo-Chr6:32438208 Blo07g00235 Blo-Chr7:2953226 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g952 . . . . . . . Bma15g00144 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo06g00918 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007995 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 2 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00918 Blo_Chr06 FPKM 2.35564 2.814041 1.93854 2.268414 2.480588 2.094471 2.354837 1.658876 1.039671 1.528566