Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00920 ATGGCTGAGGATGGAAGTCAGCCATCGTCTTCGAGACCCATAACTGCGCCGAGCTCTAAACCGACCGTATCTCCCCCGCCACGAGCTTCTGTGGAGTCGTTTTTGGAAGGTGGGAGCAGGTTGAGCTTCGATTGTAGCCCCGGGCCTATGACTCTTGTCTCTAGGTTCTTCTCTGATAACGATGATTGCAAATCCTTCTCCCAGCTTCTCGCCGGAGCTATGTCCTCGCCTTCTGCCGGTGTAACTCGGAGGCCGGAGGAGGCAGGGATTAGGGATTCTGATGAAGACGATGGATTCCAACAAATAAGGTCGGACAGCCCGGCGATTGGACCGTTTGGATTGACGCACCGACAGGTCCTTGCACAGGCAACAGTTCAGGCTGGTCGATCTAATTCCTTGCAACTCCAACCAGATCATCACTCGTCTTCCTCGTCGAAACCTGCCATGTCCTCGATTCAGCAGATGCCTCTCTTAGTGAAGGAATTTTCGGGTATTACTGAACCAGACCAGATTTGTCAACCCTCTTCACATACTGCTCATAAACCAGCTGACGATGGATATAACTGGAGAAAGTATGGACAGAAACAAGTAAAGGGAAGTGAGTTTCCTCGAAGCTATTATAAATGCACGCACCCGAGCTGTCCTGTCAAGAAAAAGGTCGAAAGGTCTACGAACGGCAGCGTTATTGAAATCATCTACAAGGGCCAGCACAATCACCAACCTCCTCTACCCAACAAGCGAGTAAACAATGCCGAGGGAAATTCAAATGCACATGCCAATTTTGAGGCACTTTCGAAAGTCCAAAACGGAAATTCAGAACTATCTGGTTCAAGCGACAGTGAGGATGCCGTCGAAACTGAAAGTGGAGTTGACGAGAAAGACGAAGACGAACGAGATCCAAAGAGACGGTGTATGGAGATCAAGGGTTCGGACCGATCGCCGTCGCAAAGAACCGTCACGGAACCTAAAATCGTTGTGCAGACGACGAGTGAGATTGATGTTTTGGAAGATGGGTATCGGTGGCGGAAATATGGCCAGAAAATTGTTAAAGGCAATCCTTACCCAAGGTACTACTACAGATGCACGACTCCAGGTTGCAGTGTTAGGAAGAATATAGAGCGGGCCGCCTCCGACCGTAAAGCTGTCATCACGACATACGAAGGAAGACACAACCACGATGTTCCCATGGCTAAGCCTTACGGCCTCAGCTCATCACACTTGAATTATGATTTCACGAGCAAAGATCGACCACCGATGGGGCGTTTGCGCTTAAAAGAAGAACACACTAAATAG 1293 49.34 MAEDGSQPSSSRPITAPSSKPTVSPPPRASVESFLEGGSRLSFDCSPGPMTLVSRFFSDNDDCKSFSQLLAGAMSSPSAGVTRRPEEAGIRDSDEDDGFQQIRSDSPAIGPFGLTHRQVLAQATVQAGRSNSLQLQPDHHSSSSSKPAMSSIQQMPLLVKEFSGITEPDQICQPSSHTAHKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPSCPVKKKVERSTNGSVIEIIYKGQHNHQPPLPNKRVNNAEGNSNAHANFEALSKVQNGNSELSGSSDSEDAVETESGVDEKDEDERDPKRRCMEIKGSDRSPSQRTVTEPKIVVQTTSEIDVLEDGYRWRKYGQKIVKGNPYPRYYYRCTTPGCSVRKNIERAASDRKAVITTYEGRHNHDVPMAKPYGLSSSHLNYDFTSKDRPPMGRLRLKEEHTK 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32450221 32452278 - BLOR17503 Blo06g00920 62213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00920 430 MobiDBLite consensus disorder prediction 1 35 - -
Blo06g00920 430 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 16 428 - -
Blo06g00920 430 MobiDBLite consensus disorder prediction 74 151 - -
Blo06g00920 430 ProSiteProfiles WRKY domain profile. 178 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 MobiDBLite consensus disorder prediction 269 321 - -
Blo06g00920 430 MobiDBLite consensus disorder prediction 1 18 - -
Blo06g00920 430 MobiDBLite consensus disorder prediction 294 310 - -
Blo06g00920 430 SUPERFAMILY WRKY DNA-binding domain 179 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 MobiDBLite consensus disorder prediction 407 430 - -
Blo06g00920 430 SMART WRKY_cls 183 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 SMART WRKY_cls 335 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 MobiDBLite consensus disorder prediction 171 195 - -
Blo06g00920 430 Pfam WRKY DNA -binding domain 184 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 Pfam WRKY DNA -binding domain 336 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 428 IPR044810 GO:0003700
Blo06g00920 430 SUPERFAMILY WRKY DNA-binding domain 327 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 Gene3D WRKY domain 170 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 Gene3D WRKY domain 320 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 MobiDBLite consensus disorder prediction 85 101 - -
Blo06g00920 430 ProSiteProfiles WRKY domain profile. 330 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo06g00920 430 MobiDBLite consensus disorder prediction 269 283 - -
Blo06g00920 430 MobiDBLite consensus disorder prediction 119 151 - -
Blo06g00920 430 MobiDBLite consensus disorder prediction 416 430 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00920 Blo-Chr6:32450221 Blo11g00565 Blo-Chr11:5384163 1.71E-13 dispersed
Blo14g00596 Blo-Chr14:10283649 Blo06g00920 Blo-Chr6:32450221 1.40E-37 dispersed
Blo18g00508 Blo-Chr18:6426052 Blo06g00920 Blo-Chr6:32450221 9.05E-16 dispersed
Blo10g00144 Blo-Chr10:1651670 Blo06g00920 Blo-Chr6:32450221 6.36E-18 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12515 PF03106 WRKY 7.00E-24 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00920 - - jre:109002894 429.098