Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo06g00921 | ATGGAGTTTTTCCAATTTCTCGATAATTCTCAGTCGGTAGAATATTCGAGTTTCGTCAGCAGCAGAACTTGTGCTAATGAAATCAGATTTAAATGGCGGAATGTGACACTCGATAGTCATTTTACTCGTGATATTCGTAAAACACGACGCGATAAGCTATCTCCAAATTCCATGATGGAAGAAACTGAGAAATTCCTTCTTAGCGTCGTAAGTATGAGCTTTCTCGACCGGCTGAACGTGGCTTGGAGGATAGTCTTTCCCTCCTCATCATCGAAAAAGAGCTCCAATGCAATGGTTGCCAAAAAACGGCTGAAAATGATTCTCTTCTCCGACAGATGCGCAGTCACCGACGAAGCAAAAAGGAAGATCGTCAACAGCATTGTCCAGGTTTTATCGGAGTTTGTCGAAATAGAGTCACAAGACCAAGTACAGTTGAGCATCTCTACGGATTCCGATATCGGAACTATTTATTCAGTGATTGTGCCGGTGAGGAGAGTGAAGCCGGAATATCAAGAGTGGGAGGAGATTGGAGGAATTGGGAATATTAGATACAAAGATGTTGGAGAAAGATCTGTCTGCAATAATCCTCTGTTCCATTGTCTCCTGCGCCCACTTTCTCCTTCTATATTTACAATAGGATTCTCCTGCTACTCTCTCTCTCCTCCGCTTCTCGCCACTCTCCCCCCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACCCGAGCCAGAGTTGTGGAGGTTTCCACTTCAAAAACTGGAAAGCATGGTCATGCTAAATGTCATTTTGTTGCCATTGACATCTTCACTGCCAAAAAGCTGGAAGACATTGTTCCTTCTTCCCACAACTGTGATGTGCCCCATGTCACCAGAACTGACTATCAGTTGATTGATATCTCCGAGGATGGATTTGTCAGTCTGCTCACTGACAATGGTAGTACCAAGGATGACCTGAGGCTTCCAACTGATGACAACCTTCTGACTCAGATCAAAGATGGATTCTCTGAGGGTAAGGATCTGGTTGTCTCCGTTATGTCTGCAATGGGAGAGGAGCAGATTTGTGCGCTCAAAGACATAGGCCCCAAGTAG | 1110 | 45.41 | MEFFQFLDNSQSVEYSSFVSSRTCANEIRFKWRNVTLDSHFTRDIRKTRRDKLSPNSMMEETEKFLLSVVSMSFLDRLNVAWRIVFPSSSSKKSSNAMVAKKRLKMILFSDRCAVTDEAKRKIVNSIVQVLSEFVEIESQDQVQLSISTDSDIGTIYSVIVPVRRVKPEYQEWEEIGGIGNIRYKDVGERSVCNNPLFHCLLRPLSPSIFTIGFSCYSLSPPLLATLPPPPPLSLSLSLSLSLSLSLTRARVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDDNLLTQIKDGFSEGKDLVVSVMSAMGEEQICALKDIGPK | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 32453612 | 32457081 | - | BLOR17504 | Blo06g00921 | 62214 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo06g00921 | 369 | Pfam | Septum formation topological specificity factor MinE | 97 | 163 | IPR005527 | GO:0032955|GO:0051301 | |
Blo06g00921 | 369 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 251 | 366 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Blo06g00921 | 369 | SUPERFAMILY | Nucleic acid-binding proteins | 296 | 366 | IPR012340 | - | |
Blo06g00921 | 369 | Gene3D | Cell division topological specificity factor MinE | 83 | 162 | IPR036707 | GO:0032955|GO:0051301 | |
Blo06g00921 | 369 | PANTHER | BNAA07G09420D PROTEIN | 251 | 366 | - | - | |
Blo06g00921 | 369 | Gene3D | - | 248 | 294 | IPR014722 | - | |
Blo06g00921 | 369 | SMART | eIF_5a_2 | 295 | 364 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Blo06g00921 | 369 | TIGRFAM | eIF_5A: translation elongation factor IF5A | 250 | 363 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Blo06g00921 | 369 | CDD | S1_eIF5A | 296 | 366 | - | - | |
Blo06g00921 | 369 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 260 | 267 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Blo06g00921 | 369 | Gene3D | - | 296 | 368 | IPR012340 | - | |
Blo06g00921 | 369 | SUPERFAMILY | Translation proteins SH3-like domain | 250 | 303 | IPR008991 | - | |
Blo06g00921 | 369 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 295 | 364 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g00921 | Blo-Chr6:32453612 | Blo12g01052 | Blo-Chr12:28322063 | 4.02E-70 | dispersed | |
Blo11g00789 | Blo-Chr11:11920878 | Blo06g00921 | Blo-Chr6:32453612 | 1.64E-82 | wgd | |
Blo16g01099 | Blo-Chr16:39479511 | Blo06g00921 | Blo-Chr6:32453612 | 1.75E-56 | wgd | |
Blo16g00178 | Blo-Chr16:3985046 | Blo06g00921 | Blo-Chr6:32453612 | 2.61E-75 | wgd | |
Blo04g00782 | Blo-Chr4:7763372 | Blo06g00921 | Blo-Chr6:32453612 | 3.32E-75 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo06g00921 | K03263 | K02180 | oeu:111405247 | 233.802 |