Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00921 ATGGAGTTTTTCCAATTTCTCGATAATTCTCAGTCGGTAGAATATTCGAGTTTCGTCAGCAGCAGAACTTGTGCTAATGAAATCAGATTTAAATGGCGGAATGTGACACTCGATAGTCATTTTACTCGTGATATTCGTAAAACACGACGCGATAAGCTATCTCCAAATTCCATGATGGAAGAAACTGAGAAATTCCTTCTTAGCGTCGTAAGTATGAGCTTTCTCGACCGGCTGAACGTGGCTTGGAGGATAGTCTTTCCCTCCTCATCATCGAAAAAGAGCTCCAATGCAATGGTTGCCAAAAAACGGCTGAAAATGATTCTCTTCTCCGACAGATGCGCAGTCACCGACGAAGCAAAAAGGAAGATCGTCAACAGCATTGTCCAGGTTTTATCGGAGTTTGTCGAAATAGAGTCACAAGACCAAGTACAGTTGAGCATCTCTACGGATTCCGATATCGGAACTATTTATTCAGTGATTGTGCCGGTGAGGAGAGTGAAGCCGGAATATCAAGAGTGGGAGGAGATTGGAGGAATTGGGAATATTAGATACAAAGATGTTGGAGAAAGATCTGTCTGCAATAATCCTCTGTTCCATTGTCTCCTGCGCCCACTTTCTCCTTCTATATTTACAATAGGATTCTCCTGCTACTCTCTCTCTCCTCCGCTTCTCGCCACTCTCCCCCCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACCCGAGCCAGAGTTGTGGAGGTTTCCACTTCAAAAACTGGAAAGCATGGTCATGCTAAATGTCATTTTGTTGCCATTGACATCTTCACTGCCAAAAAGCTGGAAGACATTGTTCCTTCTTCCCACAACTGTGATGTGCCCCATGTCACCAGAACTGACTATCAGTTGATTGATATCTCCGAGGATGGATTTGTCAGTCTGCTCACTGACAATGGTAGTACCAAGGATGACCTGAGGCTTCCAACTGATGACAACCTTCTGACTCAGATCAAAGATGGATTCTCTGAGGGTAAGGATCTGGTTGTCTCCGTTATGTCTGCAATGGGAGAGGAGCAGATTTGTGCGCTCAAAGACATAGGCCCCAAGTAG 1110 45.41 MEFFQFLDNSQSVEYSSFVSSRTCANEIRFKWRNVTLDSHFTRDIRKTRRDKLSPNSMMEETEKFLLSVVSMSFLDRLNVAWRIVFPSSSSKKSSNAMVAKKRLKMILFSDRCAVTDEAKRKIVNSIVQVLSEFVEIESQDQVQLSISTDSDIGTIYSVIVPVRRVKPEYQEWEEIGGIGNIRYKDVGERSVCNNPLFHCLLRPLSPSIFTIGFSCYSLSPPLLATLPPPPPLSLSLSLSLSLSLSLTRARVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDDNLLTQIKDGFSEGKDLVVSVMSAMGEEQICALKDIGPK 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32453612 32457081 - BLOR17504 Blo06g00921 62214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00921 369 Pfam Septum formation topological specificity factor MinE 97 163 IPR005527 GO:0032955|GO:0051301
Blo06g00921 369 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 251 366 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Blo06g00921 369 SUPERFAMILY Nucleic acid-binding proteins 296 366 IPR012340 -
Blo06g00921 369 Gene3D Cell division topological specificity factor MinE 83 162 IPR036707 GO:0032955|GO:0051301
Blo06g00921 369 PANTHER BNAA07G09420D PROTEIN 251 366 - -
Blo06g00921 369 Gene3D - 248 294 IPR014722 -
Blo06g00921 369 SMART eIF_5a_2 295 364 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Blo06g00921 369 TIGRFAM eIF_5A: translation elongation factor IF5A 250 363 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Blo06g00921 369 CDD S1_eIF5A 296 366 - -
Blo06g00921 369 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 260 267 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Blo06g00921 369 Gene3D - 296 368 IPR012340 -
Blo06g00921 369 SUPERFAMILY Translation proteins SH3-like domain 250 303 IPR008991 -
Blo06g00921 369 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 295 364 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00921 Blo-Chr6:32453612 Blo12g01052 Blo-Chr12:28322063 4.02E-70 dispersed
Blo11g00789 Blo-Chr11:11920878 Blo06g00921 Blo-Chr6:32453612 1.64E-82 wgd
Blo16g01099 Blo-Chr16:39479511 Blo06g00921 Blo-Chr6:32453612 1.75E-56 wgd
Blo16g00178 Blo-Chr16:3985046 Blo06g00921 Blo-Chr6:32453612 2.61E-75 wgd
Blo04g00782 Blo-Chr4:7763372 Blo06g00921 Blo-Chr6:32453612 3.32E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00921 K03263 K02180 oeu:111405247 233.802