Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00924 ATGGATATGGATATCGATCTCCCTCGGCCAGATCGCCAAATCAATGCCGATGATCTTTTCAGAGCAGCGGAGACCGGAGATTGTTCTTTTTTCGGAGCTCTTTCTCGAGAGCAGTGTCTCAGTGCTTTTTCTCTGAGAAATGAGGATTGCCGGTCCCTCCTCCATGTTGCTGCCTCTTCAGGCCGTACTGAGGTAGTGAAGTTGCTATCTGCATCTGATCAATCAGCTAGCGTGGTAAATAGTGCGGATGAAGAAGGGTGGGCACCGCTTCATTCTGCAAGTAGCATTGGAAATGCTGAAATAGTGGACATTTTATTAAGCATAGGTGCTGATATAAATTTGAAAAATGATGGTGGTCGAGCTGCTCTTCACTATGCAGCCAGCAAAGGATGGTTAAAGATTGCTCAAACTCTGATTTCACATGGGGCAAAGATCAATATGAAGGACAAGGTTGGTTGTACTCCACTGCATCGGGCTGCCAGCACAGGAAACTCAGAGTTGTGCGAGCTATTGATTGAGGAAGGAGCGGACCTTGATGCCATTGATAAAGCTGGTCAAACTCCTCTTATGCATGCAGCAATTTGTAACAACAGGGAGGTAGCTCTCCTTCTGGTAAGGCATGGAGCCAACCTCGACGTCGAAGACAAGGAAGGATATACAGTCCTGGGTGTGTCAAGTGATCTCAGACCAGCGCTAATCGATGCTGCAAAGGCAATGCATGAAGGATAA 729 47.05 MDMDIDLPRPDRQINADDLFRAAETGDCSFFGALSREQCLSAFSLRNEDCRSLLHVAASSGRTEVVKLLSASDQSASVVNSADEEGWAPLHSASSIGNAEIVDILLSIGADINLKNDGGRAALHYAASKGWLKIAQTLISHGAKINMKDKVGCTPLHRAASTGNSELCELLIEEGADLDAIDKAGQTPLMHAAICNNREVALLLVRHGANLDVEDKEGYTVLGVSSDLRPALIDAAKAMHEG 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32476791 32478715 - BLOR17507 Blo06g00924 62217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00924 242 Gene3D - 155 238 IPR036770 -
Blo06g00924 242 ProSiteProfiles Ankyrin repeat profile. 118 150 IPR002110 GO:0005515
Blo06g00924 242 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Blo06g00924 242 ProSiteProfiles Ankyrin repeat region circular profile. 184 216 - -
Blo06g00924 242 ProSiteProfiles Ankyrin repeat region circular profile. 85 117 - -
Blo06g00924 242 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Blo06g00924 242 SMART ANK_2a 184 213 IPR002110 GO:0005515
Blo06g00924 242 SMART ANK_2a 151 180 IPR002110 GO:0005515
Blo06g00924 242 SMART ANK_2a 49 78 IPR002110 GO:0005515
Blo06g00924 242 SMART ANK_2a 118 147 IPR002110 GO:0005515
Blo06g00924 242 SMART ANK_2a 85 114 IPR002110 GO:0005515
Blo06g00924 242 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Blo06g00924 242 ProSiteProfiles Ankyrin repeat region circular profile. 118 150 - -
Blo06g00924 242 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 41 145 - -
Blo06g00924 242 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 75 178 - -
Blo06g00924 242 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 148 222 - -
Blo06g00924 242 SUPERFAMILY Ankyrin repeat 19 224 IPR036770 -
Blo06g00924 242 Pfam Ankyrin repeats (3 copies) 44 116 IPR002110 GO:0005515
Blo06g00924 242 Pfam Ankyrin repeat 185 212 IPR002110 GO:0005515
Blo06g00924 242 ProSiteProfiles Ankyrin repeat region circular profile. 151 183 - -
Blo06g00924 242 Pfam Ankyrin repeats (many copies) 120 172 IPR002110 GO:0005515
Blo06g00924 242 Gene3D - 10 154 IPR036770 -
Blo06g00924 242 PRINTS Ankyrin repeat signature 152 167 IPR002110 GO:0005515
Blo06g00924 242 PRINTS Ankyrin repeat signature 200 214 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01165 Blo-Chr2:43306735 Blo06g00924 Blo-Chr6:32476791 2.79E-12 dispersed
Blo06g00924 Blo-Chr6:32476791 Blo12g00407 Blo-Chr12:21042084 2.80E-11 dispersed
Blo10g00394 Blo-Chr10:6721834 Blo06g00924 Blo-Chr6:32476791 7.68E-14 dispersed
Blo06g00924 Blo-Chr6:32476791 Blo16g00881 Blo-Chr16:36432056 8.22E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00924 K06694 - mnt:21387749 371.318