Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00927 ATGGGTTCAGTCGCATCTGTAATTGCAGCTATAGAATTGGGAAGTAACAGTATGGATTCAGGAATTCATACTATTGTAAATGATGGGAGTGGAAGCGGTAAACATATGCAAAAACATGTAGCTTTTGTTAATGGTACCGGTAAAGATTCAAGCAGCGTGCATTCTACGTTACTAAGGCAGAATAAGAACCTGAGGATACAAATTGGAGGTAATGGTCTGGAATGCTACCCTCTTATCTCAACCAAAGAATTAGAGGCTTCTTCATCCTCATCTTCATCAGACTCGTCGGATTTCTTTCAAGTGGATGCAAGCAAAGGTGTGAAATTAGAAGCCTGTACAAGCCCTTCAACTAAATCTCGTGAGAATTTTCAGTTGGAAATAAATGCTGACGAGAGTGATGTTTCTGTTAGTAGCTCAATCGAATCAGGAAATATCAATGATGTCTCTCCCGGCACCACGTCCATATCCCAAATTTCTGATGGGGCCCATGAGTCTATATTGCCGGGTATGTCCCCAATACAATCACCTGAGACTCAAAGAATGGATCGCACGGAAGGATATGATCCATTTAGAATTCCATCTTCTGTTTTTGATAGAAGTAAATCTACTACACCAGTAGATTGGAGTGTTGCTTCCAATGAGTCATTGTTTAGCATTCACGTTGGAAATAGTAGTTTTTCTAGAGATCATGTTTTAATGTTGGGTGATCTAGGAAAGTCTGGGGATTTAACAAAATCTGGTGAGCTATTTGTGCTTAACCCATTGCCTCAAGTTCCACGGGTGGAAAGTCGTGAAAAGACAGTTGAAACAGGAAATGGATCTGTAGTTGCTGAAGTAAAGGCCAACATTATCCAGAATGAGAAGACAGGTGCAGAATTTCAAAGGGAGAGAAAGTTAGCACCTCCCGAAGTTTCATGGAATTCATCCAATGCCTCTCAACAATCAGATGGGAGTGGAACAAGTGCACATTCTTTTGCTTTCCCAATGTAA 990 40.71 MGSVASVIAAIELGSNSMDSGIHTIVNDGSGSGKHMQKHVAFVNGTGKDSSSVHSTLLRQNKNLRIQIGGNGLECYPLISTKELEASSSSSSSDSSDFFQVDASKGVKLEACTSPSTKSRENFQLEINADESDVSVSSSIESGNINDVSPGTTSISQISDGAHESILPGMSPIQSPETQRMDRTEGYDPFRIPSSVFDRSKSTTPVDWSVASNESLFSIHVGNSSFSRDHVLMLGDLGKSGDLTKSGELFVLNPLPQVPRVESREKTVETGNGSVVAEVKANIIQNEKTGAEFQRERKLAPPEVSWNSSNASQQSDGSGTSAHSFAFPM 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32504511 32505500 + BLOR17510 Blo06g00927 62220

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00927 329 MobiDBLite consensus disorder prediction 303 322 - -
Blo06g00927 329 MobiDBLite consensus disorder prediction 288 329 - -
Blo06g00927 329 PANTHER - 28 329 - -
Blo06g00927 329 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 28 329 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00927 - - - mcha:111017534 184.111
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00155 Blo-Chr10:1805474 Blo06g00927 Blo-Chr6:32504511 4.07E-20 wgd
Blo16g00165 Blo-Chr16:3784352 Blo06g00927 Blo-Chr6:32504511 4.93E-26 wgd
Blo04g00791 Blo-Chr4:7932250 Blo06g00927 Blo-Chr6:32504511 5.25E-27 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g35 . . . . . Bpe10g00899 . Bma15g00132 Cmo04g01788 Cmo18g01125 . Cma18g01104 . Car18g01018 . Cpe09g00222 Cpe01g01506 Bhi07g01487 . . . . . . Cla05g02391 Cam05g2568 Cec05g2601 . . . Cre05g2539 . . . . . Csa05g02515 Chy10g01059 Cme10g00356 Blo06g00927 . . . . . . . . . . Cma04g01703 . Car04g01738 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009041 1 3 1 1 1 1 2 0 1 1 1 0 2 1 1 2 0 0 2 1 1 1 1 1 1 0 1 1 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00927 Blo_Chr06 FPKM 0.0 0.0 0.477212 0.458205 14.312397 14.604071 13.134466 2.034561 1.871866 1.52728