Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo06g00928 | ATGGAGGTTAAGGAAGAAGAAGAAGAAGGATCCGAGGGTGTTGAGCTGAATCTTGGGCTTTCATTGGGTGGTCGATTTGGGGTGGATAAGAATTCCAAGAAATTGATACGCTCGTCGTCGATTGCTGGAACTATAACGATAGTGAGAGGGGACGAGGCCTTGAATCCGCCAGCAGCGCGTTTTCCGGCGCTCATCAGGACATCGTCACTTCCAACGGAGACGGAGGAGGAGTGGAGAAAGAGGAAGGAACTGCAATCATTGAGAAGAATGGAGGCAAAGAGGAGGAGGTCGGAGAAGCAGCGGAGCAAGGAGGGTGTTGTGGCAGGTGCCGGCAGGTATTCGGAGGAGGAAAGGCCGGAAATCGAGGGTCTTGAGGCAGTGAATTATGGGGAAAAGAAGGGAATTCCATTGGTAGTGGAGGAGAATATGGCGGGATTGACAGTGGAATCACAAAATAGGGTGGCGGCGGCAGCAAAACAAGCTCTTTTTGGTGGGATAGACATAGGGAAGAAAGGCAGAAGTAGTCTCATGGTTGGACTTGGAGATGGTCACGGTGATGGAGAAGGAGCGGGTCGACCCATCTCGCAAGGATCGATGGAATCGCAGGGCGGAAGCCTGTCGGGGATGTCGGAATTGGAGAATAAACCTCCTACAGGATCAAACAGCAATGGCGAAGCAAGAAGCTCTTCCAGCACTCCAACACTGCAAGAACAAGGAAATGGTGGTGAGGCCGGGGGGTCGAACAAGAACGAAAATTTGAGCAAAACTTCAAAAGAAGTGATGAAGAATATGTCATGCAAGCAGGATTCTGTAAATAGTAGAGGTAGAGGGAGAGAGAGCAGGGCAAATTCAATCGAAGACATGCCGTGCGTATTCACCGTGGGAGACGGTCCGCACGGGAGAAGAGTGGAAGGAATTCTGTACAAGTATGGAAAGGGGGAGGAGGTGAGAATAATGTGCGTCTGCCATGGTACTTTTCTTTCACCAGCAGAGTTTGTGAAGCATGCTGGCGGGGGAGACGTCGCTAACCCTCTTAGACATATAGTTGTTCACCCTAAATCCTCTTCATTTTTGTAA | 1077 | 50.23 | MEVKEEEEEGSEGVELNLGLSLGGRFGVDKNSKKLIRSSSIAGTITIVRGDEALNPPAARFPALIRTSSLPTETEEEWRKRKELQSLRRMEAKRRRSEKQRSKEGVVAGAGRYSEEERPEIEGLEAVNYGEKKGIPLVVEENMAGLTVESQNRVAAAAKQALFGGIDIGKKGRSSLMVGLGDGHGDGEGAGRPISQGSMESQGGSLSGMSELENKPPTGSNSNGEARSSSSTPTLQEQGNGGEAGGSNKNENLSKTSKEVMKNMSCKQDSVNSRGRGRESRANSIEDMPCVFTVGDGPHGRRVEGILYKYGKGEEVRIMCVCHGTFLSPAEFVKHAGGGDVANPLRHIVVHPKSSSFL | 358 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 32506857 | 32508630 | - | BLOR17511 | Blo06g00928 | 62221 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo06g00928 | 358 | Pfam | Tify domain binding domain | 316 | 350 | IPR032308 | - | |
| Blo06g00928 | 358 | Pfam | Ethylene-responsive binding factor-associated repression | 10 | 43 | IPR012463 | - | |
| Blo06g00928 | 358 | PANTHER | AFP HOMOLOG 2 | 3 | 355 | IPR031307 | GO:0007165 | |
| Blo06g00928 | 358 | MobiDBLite | consensus disorder prediction | 179 | 282 | - | - | |
| Blo06g00928 | 358 | MobiDBLite | consensus disorder prediction | 195 | 271 | - | - | |
| Blo06g00928 | 358 | PANTHER | NINJA-FAMILY PROTEIN AFP1 | 3 | 355 | - | - | |
| Blo06g00928 | 358 | Coils | Coil | 80 | 100 | - | - | |
| Blo06g00928 | 358 | MobiDBLite | consensus disorder prediction | 89 | 111 | - | - | |
| Blo06g00928 | 358 | Pfam | Putative nuclear localisation signal | 64 | 214 | IPR032310 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo06g00928 | Blo11g00794 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo06g00928 | Blo-Chr6:32506857 | Blo11g00551 | Blo-Chr11:5188255 | 2.89E-24 | dispersed | |
| Blo10g00157 | Blo-Chr10:1821100 | Blo06g00928 | Blo-Chr6:32506857 | 3.37E-58 | wgd | |
| Blo11g00794 | Blo-Chr11:12100187 | Blo06g00928 | Blo-Chr6:32506857 | 1.56E-150 | wgd | |
| Blo04g00792 | Blo-Chr4:7934199 | Blo06g00928 | Blo-Chr6:32506857 | 2.10E-08 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo06g00928 | - | - | csv:101220339 | 345.51 |