Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00930 ATGAACATTCTGAGGCGAATTATTCGTAAAAGGCGTGGATTTTCTGCTCCTACTAAGATTTATGGAGTAAATGATAATGCATACTCCCTTCATTCATCATTTATCCACACTTCAATAGAGGTTCATTCTCCAGAGGAGGAAGTAGTGATTGCATTGGGAAGCAATGTAGGCGACAGATTGAAGAATTTCAATGAAGCCTTGCACTTAATGAAGAAATCTGGCATACAAATTACAAGACATGGTTGTTTATATGAGACTGCACCGGCCTACGTGACTGATCAACCTCAGTTTCTCAATTCTGCAGTTAGAGCTGTTACTCGACTCGGTCCACATGAATTGCTTGGAGCGCTCAAGAAAATTGAGAAAGACTTAGGTCGTACTGAGGGGAGAAGGTATGGTCCGAGACCAGTTGACTTGGATATCCTGTTTTATGGAAAATTTAAGATACATTCTCATATTCTTACTGTCCCACATGAAAGAATTTGGGAAAGGCCATTTGTAATGGCTCCTGTGGTTGATTTGCTTGGTTTAGCTTCTAATAGTGATGTAGCTGCTTGCTGGCATTCTTTAGCTCCTGATGTTGGAGGACTTTTTGAATCATGGGAAAAACTGGGCGGGGAATCCTTAATAGGAAAAGAAGGTTTAAAAAGAGTTTTGCCTATAGGAAACGATTTATGGGATTGGTCTAGGAAAACTTCTGTCATGGGTATACTTAATGTAACCCCGGATAGTTTCAGTGATGGTAGCAAGTTTCAGTCTGTTGAGGGTGCAATTTCTCAGGTCCGCTTGATGATTTCTGAAGGGGCAGATATGATCGATATCGGAGCACAATCTACACGGCCTATGGCTCCTAGACTTTCTGCAGAGGAAGAATTAGATAGATTAATACCTATCTTAGAAGCTGTTTTAGGAATCCCTGAAATGAAAGGGAAGCTCTTATCTGTCGATACTTTTCATTCAGAAGTTGCTTTAGAAGCCGTCAAAAAAGGCGCTCATATCATAAACGACATATCCGCGGGACAATTAGATCCGAATATGCACAAGGTTGTTGCAGCTCTCAACATTCCTTACATTGCAATGCACATGAGAGGAGACCCATCTACAATGCAAAACGATGAAAATTTGCAGTACACTGATCTCTGTAATCAAATTGGCTCTGAATTATATTTACGGGTTAGAGATGCTGAATTATCCGGCATTCCGGCGTGGAGAGTAATTGTTGACCCGGGAATCGGGTTCTCGAAGAACACCAAGCAAAATTTGGAAATCCTCATGAATTTAGCCAAAATTCGAGGTGCAATGGCCACAAAAAGTTTGGGTTTGTCTCATGTTCCATTGTTGATTGGACCTTCGAGAAAGCGATTTATTGGCGAAGTCTGCTCCATTTCCTCTGCAGCTGAGAGAGATTACGCTACAGTTGCTTCGACTACGGCTGGAGTATTAGGGGGTGCAAATGTTGTAAGAGTTCATAATGTAAGAGCCAATGCAGATGCTGTGAAACTGTGTGATGCAATGTTGAAGCTGCAAAAGAGGGAATTTACATGA 1545 41.42 MNILRRIIRKRRGFSAPTKIYGVNDNAYSLHSSFIHTSIEVHSPEEEVVIALGSNVGDRLKNFNEALHLMKKSGIQITRHGCLYETAPAYVTDQPQFLNSAVRAVTRLGPHELLGALKKIEKDLGRTEGRRYGPRPVDLDILFYGKFKIHSHILTVPHERIWERPFVMAPVVDLLGLASNSDVAACWHSLAPDVGGLFESWEKLGGESLIGKEGLKRVLPIGNDLWDWSRKTSVMGILNVTPDSFSDGSKFQSVEGAISQVRLMISEGADMIDIGAQSTRPMAPRLSAEEELDRLIPILEAVLGIPEMKGKLLSVDTFHSEVALEAVKKGAHIINDISAGQLDPNMHKVVAALNIPYIAMHMRGDPSTMQNDENLQYTDLCNQIGSELYLRVRDAELSGIPAWRVIVDPGIGFSKNTKQNLEILMNLAKIRGAMATKSLGLSHVPLLIGPSRKRFIGEVCSISSAAERDYATVASTTAGVLGGANVVRVHNVRANADAVKLCDAMLKLQKREFT 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32532101 32534511 + BLOR17513 Blo06g00930 62223

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00930 514 Gene3D - 213 511 IPR011005 GO:0044237
Blo06g00930 514 PANTHER FOLATE SYNTHESIS PROTEINS 39 506 IPR045031 GO:0004156|GO:0009396
Blo06g00930 514 ProSitePatterns Dihydropteroate synthase signature 1. 234 249 IPR000489 GO:0042558
Blo06g00930 514 ProSitePatterns Dihydropteroate synthase signature 2. 268 281 IPR000489 GO:0042558
Blo06g00930 514 TIGRFAM DHPS: dihydropteroate synthase 234 505 IPR006390 GO:0004156|GO:0009396
Blo06g00930 514 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 49 174 IPR000550 GO:0003848|GO:0009396
Blo06g00930 514 SUPERFAMILY Dihydropteroate synthetase-like 221 507 IPR011005 GO:0044237
Blo06g00930 514 SUPERFAMILY 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 48 175 IPR035907 -
Blo06g00930 514 Pfam Pterin binding enzyme 235 490 IPR000489 GO:0042558
Blo06g00930 514 ProSitePatterns 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 131 142 IPR000550 GO:0003848|GO:0009396
Blo06g00930 514 PANTHER FOLIC ACID SYNTHESIS PROTEIN FOL1 39 506 - -
Blo06g00930 514 CDD DHPS 232 503 IPR006390 GO:0004156|GO:0009396
Blo06g00930 514 ProSiteProfiles Pterin-binding domain profile. 232 500 IPR000489 GO:0042558
Blo06g00930 514 CDD HPPK 48 174 IPR000550 GO:0003848|GO:0009396
Blo06g00930 514 Gene3D - 45 193 IPR035907 -
Blo06g00930 514 TIGRFAM folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 48 174 IPR000550 GO:0003848|GO:0009396
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00930 K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] - cit:102617876 751.125
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g20 . . . . . Bpe10g00904 . Bma15g00128 . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0898 Cone19ag0895 . . . . . . Blo06g00930 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007691 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 2 1 1 1 1 2 1 1 1 1 1 2 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00930 Blo_Chr06 FPKM 3.893781 3.800792 7.339612 6.986705 5.358702 5.970768 5.128173 8.360692 7.916591 8.91555