Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00939 ATGAACATGAGTTTTACGCAAGACATGGAATGTGAATATGAAAAACTAATTCGAAGAATGAATCCACCCAGGGTTGTAATTGATAATGAAGCCTGTAAAAATGCCACAGTGATAAGGGTCGATAGCGCAAATAAACACGGGATTCTTCTTGAAGTTGTACAAGTTCTTACTGATCTCGACCTCATCGTAACCAAAGCTTATATATCATCTGATGGCTGTTGGTTCATGGATGTTTTTAATGTCACCGACCCCGAAGGAAACAAGATTACAGATGAAGAAACTTTGGATTACATCCGAAATTCTCTTGGGTCGGAATCTTGTGTTGCATCTTCGATCAGTTCGGTTGGTGTGAAAGCTTCAGTGGATCATAATACGATAGAACTAATTGGAAGTGATAGGCCTGGACTCCTCTCAGAAATGAGTGCAGTTCTTACTCATCTTAATTGCAATGTAGTCAGTGCAGAAGTTTGGACGTACAATACAAGGGCTGCAGCCGTAATGCAAGTGACGGACGAGGAAACGGGGTCTGCCATTAACGATCCAGAGAGACTATCGAAAATTAAAAAATTACTTTCCAATGTAATCAAAGGAAGCAACAAATCAGGTGGATCTAAGACCGCAATCTCCCATGGGGTTACCCACACCGATCGGAGACTTCATCAGATGATGTTTGCCGATCGAGACTATGAACGAATGGGCGATGATAATTTGGATTATAAGCGAAGACCAAATGTGAATGTCGTTAATATCTGTGATAAAGACTACTCTGTGGTGACGATTGAGAGTAAGGATAGGCCGAAGCTTCTTTTCGACACAGTATGCACTTTGACAGACATGCAATATGTCGTTTTCCATGCGAAAATTGATGCAGAAGGTCCTGAAGCTTATCAGGAATATTATATAAGACACGTAGATGGATCTTCGGTGAAATCAGATGCAGAACGACAAAGGGTGATCCAATGTCTCAAGGCTGCTATCGAGAGAAGAGCTTCGGAGGGGTTGAAGCTCGAACTATGCATGGTAGATCGAGTTGGGTTGCTGTCTGACGTAACTCGGATCTTCAGAGAGAACAGCCTCAACGTGACAAGAGCAGAAGTGAGCACAAAATCAGGCAAGGCAATAAACACTTTTTACGTTCGAGATGCTTCGGGATATTCAGTCGATTCTAAGACCATAGAAACCATTAGACAAGCAATTGGACAAACTTTACTTAAAGTAAAAGGTAGTCCGGAAGAGTCGAAAACCCTGACCCAAGAGTCTTCCACCAGCTCCCTCTTCGGTGGCCTCTTCAAGTCTCGATCTTTCGCAAACTTCAGGCTGGCCAAAATGATGGAAAAAGAAGAATTAGGAGAGGTTTTGGAATCTAGAGCTTGTCACGTGATGGGTGCACTTAAAGGCGGAAAGACTAAAAGGAAGCTAGATGACATAGTTTACATTGACGTTGATGGTGATAGATTTGATAATGCTATTGTAATTGATGATGATGACTATGGATCAAAAAGCTCCTATTCCAATCGGCAACAACATAAGAAAGTATCATGCGTCATATGTGTTGATGATGATGATAATGATGATGCGGATTGTCAACAAACAAGTGTACATAATGTTGGAGATTTGGATAGCGATGCTAGTTCTGGCCGAAGATCGTTCCCCACTTCTAATTCTAAACTTCATATGATTGACATAGATGGTGATGGAAGCCCAGTCAACGATGAGAAAAAATTTGCATTTAAATTGTCAAGATGCAAGCAGAAAAGTTTTGGTAAAGTTCCTGCAAGAAATTGTTATGGGTTGAGTTTGAACACTTACACTGGTTCATCAGAAAGTGATTGTTCTGATTGTGAAGTTATTGATAGTTCTTGTGAAAAGCTTCAAGAACAATGGAAAAGAGATTCACAAAAGAGAAGAACATGTGTTCCTGCTGATGACTTCAGAGCGGGTGATCAAGCCAGCACATCCAGTTTCCCTAGTGATACTAAACTTAATGCCAATTTAGAAAAGAGGAAGGAGCCACATCTTCCTTCCCCTCTTTATTGTAGTCCAAATGATAGATCAGATTCTATGAAAATAACTCTAGGAATGGAAGCCAAAGGATCATCTGATACAAAAAATGTGGCTGTTGCTCAAATAAGGGAGGTTGTTCCATGTGTTGGAAGTAGTATAATTAATGAGCGAGAAAATTTAAAGGCAAGCGATGAATACAAGGCTGCAGTAGAAGAAGAGTGGGCTGCGAGAAAGCGGGAATTACAAATTCAGGCAGAAGAGTCACAGAGGTTGCGTAAAAGAAAAAAGGCTGAAACTTTACGTCTGTTAGACATGCAGAGAAGGCAAAAGGAGCGTCTGGAAGAAGTGAGGGAGACTCAAAAGAAAGATGAGGAAAATATGAACTTGAAAGAGAAAATTCGTGCTGAAATAATGGAGAGTCTTCGTGAGTTGGAAGTCACATGCGTTGACATGGCTTCGTTGCTTCGAGGTTTAGGAATTCAAGTGGGACGTGGCTTAATTCCACAATCTGAAGAAGTGCACGCTGCGTACAAAAGAGCTCTGTTTAAATTTCACCCAGACAGGGCATCGAGAATGGACGTCCGCCAACAGGTCGAAGCTGAGGAGAAGTTTAAACTTATATCTCGCATGAAAGAGAAACTCCAACAGTAG 2655 41.24 MNMSFTQDMECEYEKLIRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLDLIVTKAYISSDGCWFMDVFNVTDPEGNKITDEETLDYIRNSLGSESCVASSISSVGVKASVDHNTIELIGSDRPGLLSEMSAVLTHLNCNVVSAEVWTYNTRAAAVMQVTDEETGSAINDPERLSKIKKLLSNVIKGSNKSGGSKTAISHGVTHTDRRLHQMMFADRDYERMGDDNLDYKRRPNVNVVNICDKDYSVVTIESKDRPKLLFDTVCTLTDMQYVVFHAKIDAEGPEAYQEYYIRHVDGSSVKSDAERQRVIQCLKAAIERRASEGLKLELCMVDRVGLLSDVTRIFRENSLNVTRAEVSTKSGKAINTFYVRDASGYSVDSKTIETIRQAIGQTLLKVKGSPEESKTLTQESSTSSLFGGLFKSRSFANFRLAKMMEKEELGEVLESRACHVMGALKGGKTKRKLDDIVYIDVDGDRFDNAIVIDDDDYGSKSSYSNRQQHKKVSCVICVDDDDNDDADCQQTSVHNVGDLDSDASSGRRSFPTSNSKLHMIDIDGDGSPVNDEKKFAFKLSRCKQKSFGKVPARNCYGLSLNTYTGSSESDCSDCEVIDSSCEKLQEQWKRDSQKRRTCVPADDFRAGDQASTSSFPSDTKLNANLEKRKEPHLPSPLYCSPNDRSDSMKITLGMEAKGSSDTKNVAVAQIREVVPCVGSSIINERENLKASDEYKAAVEEEWAARKRELQIQAEESQRLRKRKKAETLRLLDMQRRQKERLEEVRETQKKDEENMNLKEKIRAEIMESLRELEVTCVDMASLLRGLGIQVGRGLIPQSEEVHAAYKRALFKFHPDRASRMDVRQQVEAEEKFKLISRMKEKLQQ 884
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32609995 32618417 + BLOR17522 Blo06g00939 62232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00939 884 Gene3D DnaJ domain 836 884 IPR036869 -
Blo06g00939 884 SUPERFAMILY ACT-like 123 196 IPR045865 -
Blo06g00939 884 ProSiteProfiles ACT domain profile. 335 411 IPR002912 -
Blo06g00939 884 SUPERFAMILY Chaperone J-domain 777 882 IPR036869 -
Blo06g00939 884 Gene3D - 334 406 - -
Blo06g00939 884 Gene3D - 123 197 - -
Blo06g00939 884 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 442 IPR040217 -
Blo06g00939 884 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 4 442 - -
Blo06g00939 884 ProSiteProfiles dnaJ domain profile. 821 884 IPR001623 -
Blo06g00939 884 SUPERFAMILY ACT-like 331 400 IPR045865 -
Blo06g00939 884 ProSiteProfiles ACT domain profile. 37 117 IPR002912 -
Blo06g00939 884 Coils Coil 746 798 - -
Blo06g00939 884 CDD ACT_ACR_3 255 329 - -
Blo06g00939 884 Pfam ACT domain 336 398 IPR002912 -
Blo06g00939 884 Pfam ACT domain 36 88 IPR002912 -
Blo06g00939 884 ProSiteProfiles ACT domain profile. 125 202 IPR002912 -
Blo06g00939 884 CDD DnaJ 839 876 IPR001623 -
Blo06g00939 884 SUPERFAMILY ACT-like 32 103 IPR045865 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00462 Blo06g00939 CCT
Blo01g00462 Blo06g00939 ECH
Blo06g00939 Blo11g00801 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00939 Blo-Chr6:32609995 Blo10g00400 Blo-Chr10:6832733 7.48E-145 dispersed
Blo07g00660 Blo-Chr7:21594732 Blo06g00939 Blo-Chr6:32609995 3.88E-08 transposed
Blo11g00802 Blo-Chr11:12559687 Blo06g00939 Blo-Chr6:32609995 0 transposed
Blo11g00801 Blo-Chr11:12495951 Blo06g00939 Blo-Chr6:32609995 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00939 - - pop:7489403 711.449