Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00943 ATGGCTTCTTTCTTGATGGAGGATTTCATTGGGAATGGAGTTTTGAAGGGTTTGCTTCCAAAGTTGTTGGAGGAAGGATGGGATGATGTTCCTACCTTGAAGGTCATGACTTCCATGGACATGGACGATGTTAATATGACCCGACGCCAGAAGGAAGCACTTGAAATCAGATCATACCTACATGAGAGAGCTCTAATGCAATATGGAGATAAACTAGAATTGGCCGGAAAATGTCTCCCTGAACTTCTCGAGTTAAGCGTCGAGAGCTTAATTTCTCAATTCAACATGAAACGGGGCCACATCGCCCGCTTCAAAAACAGAGCTAGTTCATGTCTCGATCCTTCTCCAACAAATTCGGCAACCAAAAATGTCGATCCACCTCCTCGAAACCCAAGCATCGAAAAAGGGAGCTATGGGACGATTAACAGCACTAAGAGTCGCAAAACTAAAAAGACAGATCTTGAAAGATCGCTTTCGGAGTTTCGAATCAAAGAAGGGTACTCTTTTAAAGGTATTGTAGCAGCAGGGCCAGCTGAGCCAAGAGCATGTGGCTGTGTATATCCTCCCCCTGTTGTTGAAAATGTGGCTTCTTATTCTGTAATCCAAAACATTTCGGTTCAAAAATTAACTCCTGAGTACAAGGTCGGAATTGAGCCGTTGGTGAAATCAAAGACGCCTCCGATGAAGGCTTTTAATTTGTGGCAACATAGACCCGCTGTTATTCTTTGCATTCGACGCCCCGGGTGCATAATGTGCAGAGCCGTAGCTCACCAGCTCTACGGTAAAAAACCGATATTTGATGCTTTGGGAGTTCAACTGTTCGCTGTTCTTCACGAGCACATAGAACCAGAGGTGAACGACTTCTGGCCGAGGTATTGGGGAGGAGTCGTACTTTTGGATCAAAGCATGGAATTTTTCAAAGCTCTTGGAGGTGGAAAACTTCTGAAGGACAAGTTCCTTTCGGGATTCGTATTTAATCCTCGAGCGATTTCGAATTATAAACGCGCAAAGGCGATGGGAATAAAGCAAAACTTTGTGGGGGAAGGTGAAATAAAGGGTGGTCTTTTTGTGGTTGGTCCTGGAAAGAGTGGCATTGCTTATGAGTTTATAGAGAGAAATTTTGGAGATTGGGCTCCTCTGCCTGAAGTGATTGCAATTTGTACTCAATTGAAGAATGGCATTGCGTCGCAGCGGGCGTCGATCATCAAACGACCTGAAAAAGAAAAGAGCTCTAGTTCATCATCGGGTGGCATAAATTCCGAGTAA 1266 44.39 MASFLMEDFIGNGVLKGLLPKLLEEGWDDVPTLKVMTSMDMDDVNMTRRQKEALEIRSYLHERALMQYGDKLELAGKCLPELLELSVESLISQFNMKRGHIARFKNRASSCLDPSPTNSATKNVDPPPRNPSIEKGSYGTINSTKSRKTKKTDLERSLSEFRIKEGYSFKGIVAAGPAEPRACGCVYPPPVVENVASYSVIQNISVQKLTPEYKVGIEPLVKSKTPPMKAFNLWQHRPAVILCIRRPGCIMCRAVAHQLYGKKPIFDALGVQLFAVLHEHIEPEVNDFWPRYWGGVVLLDQSMEFFKALGGGKLLKDKFLSGFVFNPRAISNYKRAKAMGIKQNFVGEGEIKGGLFVVGPGKSGIAYEFIERNFGDWAPLPEVIAICTQLKNGIASQRASIIKRPEKEKSSSSSSGGINSE 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32661757 32663551 + BLOR17526 Blo06g00943 62236

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00943 421 PANTHER - 1 402 - -
Blo06g00943 421 MobiDBLite consensus disorder prediction 401 421 - -
Blo06g00943 421 MobiDBLite consensus disorder prediction 108 153 - -
Blo06g00943 421 PANTHER - 1 402 IPR032801 -
Blo06g00943 421 MobiDBLite consensus disorder prediction 110 126 - -
Blo06g00943 421 Pfam AhpC/TSA antioxidant enzyme 259 372 IPR032801 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00943 - - - tcc:18610152 559.681
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1008 . . . . . Bpe10g00916 . Bma15g00107 . Cmo18g01101 . Cma18g01078 . Car18g01001 . Cpe09g00245 . Bhi07g01436 Tan04g0948 . Lac13g0415 Hepe10g1829 . . Cla05g02368 . . . . . . . . . . Lsi04g00330 Csa05g02539 Chy10g01081 Cme10g00329 Blo06g00943 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g01208 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011750 1 2 1 1 1 0 1 0 0 1 1 0 1 1 1 1 0 2 1 0 1 1 1 1 2 1 1 2 3 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00943 Blo_Chr06 FPKM 26.648481 33.240604 31.786505 29.377314 23.460623 24.877914 23.889429 29.489656 34.291042 32.656033