Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00945 ATGCCTCCTCGCTTACCTCCCTCTTTCATCCCCCAGACCTCATCCAAGCTCTGTTTTCCCGGCGATTTACGGATTCCTAGGCTCACCTCTGTTTGCTCCCATCTGTCGGGTTCCGACGGCCTGGTGTCCAAGCGATCTGTCAGGTTGAAAGAGTCTGATTCTTCCGTCGGTTCTTCCTGTTCTCCCTCTTCGTCTTCCGCCATTGATTTTCTCACCTTGTGTCATCGTCTTAAGCCAATTGCATTTTACACTTCCTGTAATACTCTTACTCTTTCCCTCCCACAAACCACAAAAAGAAAGGGGTGGATCAATCATAGAATTAAAGGTCCTGAATTAATTGCTGACCATATGTACCGCATGGCTTTGATGGCTTTGATTGCCGAGGACATTCCAGGTGTGAACAGAGAAAGGTATCAAATCATACTACTAAACGATTTTGATTATTTATCTTTTTCCGATTTTGTTTTTGTGGAACTGGGTGCATTAAGATTGCAATTGTACATGACATTGCGGAAGCTCTTGTTGGAGATAGAACACCGTCAGTCGTCAGATGGAGTGCCCAAAGATGAAAAGAGTAGAAGAGAGTCGGCTGCGTTAAATGAATTGTGCGAGGTTGAAATGATTCTGCAAGCATCGGAGTTTGAAATCGAGCATGGGAAGGTTCTCGATGAGTTTTACCTTTCAACAGCTGATAAGAACCTTTCTCCACCACCACCATCATTGAGTCCACCTCCAAATGTAAGACCACCACCACCTCCTCAATCAATTCCTCCTGAGAATTCACCCCCACCGCCACCTGAGAATTCACCTCCACCACCACCACCAACACCTGAGACACCTTTACAGTCACCACCTCCACCACCGGTACGTCCTGAAAATCCCCCTCCTCCACCGTCAACATTACCTCCTACTACAGCACCTCCACCTCCACGAACTGCTCCTCCACCTCAAGAAGCATCACCTCCACCACTCATCATTCAACTATCACCTCCCCCACCCTCCATTCTTGCTCCTCCACCACCATCAGGCAATTCAAACAATGATTCCACTCCAAATTCTTCACAAAGTTCAAACTCCACAAGCAATGGGGGTGTTGGTGCTGGTGGAATTATAGCTATTGGTGCAATTGCCGGGATCGTAGTGCTTAGTCTTCTTGGCCTGGTCATTTGGTGCTTGAGGAAGCGAAGGCCTAGAGTTTCTGGACTCGGTGGTTATGCTGTGCCATCGTCTCTTGACTCCTCACCAAGATCAGCTTCAGCCCTTATGAAGGTGCACTCCTCAATTCCCCCTGTTGGTAGTGGCTATGCCAGTGACCGAGTACATTCACCAGCCGAGCCTGGAGGACTAGGCAATTCTAGGTCATGGTTCACGTACGAAGAACTAGCCACTGCCACAAAGGGGTTTGCAGCTGAAAACCTTCTGGGTGAAGGCGGATTTGGATCCGTTTATAAAGGAAATCTATCAGATGGGAGAGAAGTAGCTGTGAAGGAGCTGAAAATTGGCGGTGGTCAAGGAGAACGAGAATTCAAAGCTGAAGTTGAGATTATCAGCCGCATACACCATCGCCACCTAGTATCATTAGTCGGCTATTGCATATCAGGGAGCCGGAGGCTACTTGTCTATGACTATGTTCCTAATGATACCCTCCATTATCATCTTCATGGAAAGAACAGGCCAGTTCTTGAATGGGCAAAGCGCTTTAAGATAGCAGGCGGTGCAGCCCGCGGATTGGCTTATCTCCATGAAGATTGTCATCCTAGAATTATTCACAGAGATATCAAATCGTCGAACATTCTTTTAGATGACAACTTTGAAGCTCGGGTTTCGGATTTTGGACTTGCAAAACTAGCTCTCGATGCAAATACACATATAACGACTCGTGTCATGGGAACTTTTGGATATGTAGCCCCTGAATATGCCTCAAGTGGAAAATTAACTGAGAAATCAGATGTATTCTCTTTTGGAGTAGTGCTTCTTGAGCTAATTACTGGAAGAAAGCCTGTAGATGCATCACAGCCACTGGGGGATGAAAGTTTAGTTGAATGGGCTCGTCCATTGCTAAGTCATGCGCTTGACAGAGAAGAGTTTGATTCATTGGTGGATCCACGACTTGAAGAGAACTATGTTGAGAGAGAGATGTTCAGGATGATCGAGGTTGCTGCAGCTTGCGTGAGACATTCAGCGGCCAAGCGGCCTTCAATGGGACAGGTCGTTAGAGCATTCGATATCGTAAGTTCTTCGGATTTAACAAATGGAATGAGAGTGGGGGAGAGTGAGGCATTTGACTCTGCTCAACAATCTGCAGAAATCAGTTTATTTAAGGAGCCCCACGTCTTCAACCGTCCGGAGCAAAGGAACAATAATAAATCAGAGGCGTTTCTCCTTTCTTCTTCAATGGGGATTCTCCATGGCGATCAGTTGAAACAGCTGAAAGAAATCTTCATCCGCTTCGATATGGACTCTGACGGAAGCTTAACACAGCTAGAACTCGCCGCTCTTTTACGCTCCCTTGGCCTCAAGCCCACCGGCGATCAACTCCACGAATTACTCGCCAACATTGATTCCAACGGCAATGGATCCGTCGAATTTGACGAGTTAGTCACCGCGATGTCGCCTGAGATAAGCGATCAGGTCCTCGTTAACCAGGAGCAGCTCTTGGAGGTATTCCGCGCCTTTGATCGAGACGGCAATGGCTACATCACCGCCGCCGAGCTCGCCGGATCTATGGCTAAGATGGGACAGCCATTGACGTACCGAGAGCTCTCCGATATGATGCGAGAAGCCGATTCTAACGGCGACGGTGTGATTAGTTTCAGCGAATTCAAGTCTATGATGGCGAAGTCCGCCGCCGATTTTCTCGGCCTCTCTGTCGCCTAA 2877 47.69 MPPRLPPSFIPQTSSKLCFPGDLRIPRLTSVCSHLSGSDGLVSKRSVRLKESDSSVGSSCSPSSSSAIDFLTLCHRLKPIAFYTSCNTLTLSLPQTTKRKGWINHRIKGPELIADHMYRMALMALIAEDIPGVNRERYQIILLNDFDYLSFSDFVFVELGALRLQLYMTLRKLLLEIEHRQSSDGVPKDEKSRRESAALNELCEVEMILQASEFEIEHGKVLDEFYLSTADKNLSPPPPSLSPPPNVRPPPPPQSIPPENSPPPPPENSPPPPPPTPETPLQSPPPPPVRPENPPPPPSTLPPTTAPPPPRTAPPPQEASPPPLIIQLSPPPPSILAPPPPSGNSNNDSTPNSSQSSNSTSNGGVGAGGIIAIGAIAGIVVLSLLGLVIWCLRKRRPRVSGLGGYAVPSSLDSSPRSASALMKVHSSIPPVGSGYASDRVHSPAEPGGLGNSRSWFTYEELATATKGFAAENLLGEGGFGSVYKGNLSDGREVAVKELKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISGSRRLLVYDYVPNDTLHYHLHGKNRPVLEWAKRFKIAGGAARGLAYLHEDCHPRIIHRDIKSSNILLDDNFEARVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHALDREEFDSLVDPRLEENYVEREMFRMIEVAAACVRHSAAKRPSMGQVVRAFDIVSSSDLTNGMRVGESEAFDSAQQSAEISLFKEPHVFNRPEQRNNNKSEAFLLSSSMGILHGDQLKQLKEIFIRFDMDSDGSLTQLELAALLRSLGLKPTGDQLHELLANIDSNGNGSVEFDELVTAMSPEISDQVLVNQEQLLEVFRAFDRDGNGYITAAELAGSMAKMGQPLTYRELSDMMREADSNGDGVISFSEFKSMMAKSAADFLGLSVA 958
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32676531 32687595 - BLOR17528 Blo06g00945 62238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00945 958 Gene3D Transferase(Phosphotransferase) domain 1 544 759 - -
Blo06g00945 958 Pfam EF-hand domain pair 808 871 IPR002048 GO:0005509
Blo06g00945 958 Pfam EF-hand domain pair 883 945 IPR002048 GO:0005509
Blo06g00945 958 ProSitePatterns EF-hand calcium-binding domain. 854 866 IPR018247 -
Blo06g00945 958 Gene3D Phosphorylase Kinase; domain 1 440 543 - -
Blo06g00945 958 SUPERFAMILY EF-hand 801 946 IPR011992 -
Blo06g00945 958 Pfam Protein kinase domain 470 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00945 958 PRINTS Proline rich extensin signature 250 266 - -
Blo06g00945 958 PRINTS Proline rich extensin signature 235 247 - -
Blo06g00945 958 PRINTS Proline rich extensin signature 298 319 - -
Blo06g00945 958 PRINTS Proline rich extensin signature 275 287 - -
Blo06g00945 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Blo06g00945 958 ProSiteProfiles Protein kinase domain profile. 468 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00945 958 MobiDBLite consensus disorder prediction 236 340 - -
Blo06g00945 958 CDD EFh 884 946 IPR002048 GO:0005509
Blo06g00945 958 Gene3D - 796 900 - -
Blo06g00945 958 CDD STKc_IRAK 474 739 - -
Blo06g00945 958 ProSitePatterns EF-hand calcium-binding domain. 818 830 IPR018247 -
Blo06g00945 958 ProSiteProfiles EF-hand calcium-binding domain profile. 916 951 IPR002048 GO:0005509
Blo06g00945 958 SMART serkin_6 468 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00945 958 Pfam HD domain 96 138 IPR006674 -
Blo06g00945 958 ProSitePatterns EF-hand calcium-binding domain. 893 905 IPR018247 -
Blo06g00945 958 ProSiteProfiles EF-hand calcium-binding domain profile. 805 840 IPR002048 GO:0005509
Blo06g00945 958 MobiDBLite consensus disorder prediction 341 362 - -
Blo06g00945 958 Gene3D - 901 953 - -
Blo06g00945 958 ProSiteProfiles EF-hand calcium-binding domain profile. 841 876 IPR002048 GO:0005509
Blo06g00945 958 ProSitePatterns Protein kinases ATP-binding region signature. 474 496 IPR017441 GO:0005524
Blo06g00945 958 ProSitePatterns EF-hand calcium-binding domain. 929 941 IPR018247 -
Blo06g00945 958 SUPERFAMILY HD-domain/PDEase-like 96 140 - -
Blo06g00945 958 SUPERFAMILY Protein kinase-like (PK-like) 449 740 IPR011009 -
Blo06g00945 958 ProSiteProfiles EF-hand calcium-binding domain profile. 880 915 IPR002048 GO:0005509
Blo06g00945 958 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 276 776 - -
Blo06g00945 958 Gene3D Hypothetical protein af1432 55 237 - -
Blo06g00945 958 MobiDBLite consensus disorder prediction 232 362 - -
Blo06g00945 958 PANTHER BNACNNG34790D PROTEIN 276 776 - -
Blo06g00945 958 SMART efh_1 884 912 IPR002048 GO:0005509
Blo06g00945 958 SMART efh_1 845 873 IPR002048 GO:0005509
Blo06g00945 958 SMART efh_1 920 948 IPR002048 GO:0005509
Blo06g00945 958 SMART efh_1 809 837 IPR002048 GO:0005509
Blo06g00945 958 CDD EFh 809 871 IPR002048 GO:0005509
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00978 Blo-Chr2:37891363 Blo06g00945 Blo-Chr6:32676531 5.53E-07 dispersed
Blo03g00105 Blo-Chr3:3333165 Blo06g00945 Blo-Chr6:32676531 8.08E-47 dispersed
Blo06g00945 Blo-Chr6:32676531 Blo11g00345 Blo-Chr11:2855608 1.14E-179 dispersed
Blo08g00005 Blo-Chr8:44991 Blo06g00945 Blo-Chr6:32676531 8.46E-74 dispersed
Blo10g00615 Blo-Chr10:18934834 Blo06g00945 Blo-Chr6:32676531 3.37E-98 dispersed
Blo11g00082 Blo-Chr11:611148 Blo06g00945 Blo-Chr6:32676531 1.03E-22 dispersed
Blo12g00656 Blo-Chr12:24897713 Blo06g00945 Blo-Chr6:32676531 5.61E-26 dispersed
Blo14g00632 Blo-Chr14:12417568 Blo06g00945 Blo-Chr6:32676531 6.86E-93 dispersed
Blo15g00478 Blo-Chr15:7789309 Blo06g00945 Blo-Chr6:32676531 2.36E-71 dispersed
Blo18g00689 Blo-Chr18:14827290 Blo06g00945 Blo-Chr6:32676531 1.81E-90 dispersed
Blo13g00667 Blo-Chr13:29399829 Blo06g00945 Blo-Chr6:32676531 3.38E-76 transposed
Blo10g00182 Blo-Chr10:2165998 Blo06g00945 Blo-Chr6:32676531 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84350 PF07714 PK_Tyr_Ser-Thr 7.30E-45 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00945 - - mnt:21409212 655.595