Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00953 ATGCAAGATTTCCAGGAAGAGCTGCAGTTCCAACAACAATATCTGATTCAGCAGCTTCAAAACAATGGAGGAGGAAGAGAATATGATTTCTCTCAAGTTTCTCCAATGTTACAGCCATGGTCGGAGCCTTTTCTGATCCCTCCTCCCCCATTGTCGTACCCGGCTGGTTTCTTCAACCGAACTGCTCCTTCTCTTCAGCTTGCTTACGATGGTTCGTCAATGGAGCAGCTGAGAATTTTGTCCAACAGTTTTGGGGTGCAAGCTGAGATTGATAAGATGACTGCTCAAGAAATTATGGACGCTAAAGCTCTTGCTGCTTCAAAGAGTCATAGCGAAGCTGAGAGAAGAAGACGAGAGAGAATCAATAATCATCTTGCTAAGCTTCGAACTTTACTACCTAGCACCACCAAGACTGATAAAGCTTCACTACTAGCGGAGGTAATACAACACGTAAAAGAACTAAAGCGACAAACTTCGTTGATCGCAGAGACAAATCTAGTTCCGACCGAAAATGACGAGCTGACTGTCGATGCTTCTGACGATGACGGAAAGTTTGTAATCAGAGCGTCAATTTGCTGCGATGATCGGTCGGATCTTTTGCCTGACCTGATAAAAACCCTAAAATCACTCCGTTTAAGAACCCTGAAAGCGGAGATCACGACGATGGGAGGAAGAACGAAGAACGTGCTATTTATAACCGGAGATGACGATTCTAGTGAGGAGGGGGAAGAGCAGGAGCAGCTGTATTGTATAAGCTCAATTCAAGAAGCACTGAAGGCAGTGATGGAGAAGACAAGAGGGGATGATTCAAATAATCCTTCCACAGTTGTGAAGAGGCAAAGGACTAGTAATGTCCATACCCTTTGA 867 44.64 MQDFQEELQFQQQYLIQQLQNNGGGREYDFSQVSPMLQPWSEPFLIPPPPLSYPAGFFNRTAPSLQLAYDGSSMEQLRILSNSFGVQAEIDKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRTLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETNLVPTENDELTVDASDDDGKFVIRASICCDDRSDLLPDLIKTLKSLRLRTLKAEITTMGGRTKNVLFITGDDDSSEEGEEQEQLYCISSIQEALKAVMEKTRGDDSNNPSTVVKRQRTSNVHTL 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32757026 32758789 - BLOR17536 Blo06g00953 62246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00953 288 Pfam Helix-loop-helix DNA-binding domain 108 154 IPR011598 GO:0046983
Blo06g00953 288 Gene3D - 99 164 IPR036638 GO:0046983
Blo06g00953 288 MobiDBLite consensus disorder prediction 267 288 - -
Blo06g00953 288 PANTHER TRANSCRIPTION FACTOR BHLH30 33 287 IPR045847 GO:0003700|GO:0006355
Blo06g00953 288 PANTHER TRANSCRIPTION FACTOR BHLH30 33 287 - -
Blo06g00953 288 CDD bHLH_AtAIG1_like 100 178 - -
Blo06g00953 288 CDD ACT_UUR-ACR-like 190 262 - -
Blo06g00953 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 105 154 IPR011598 GO:0046983
Blo06g00953 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 109 161 IPR036638 GO:0046983
Blo06g00953 288 MobiDBLite consensus disorder prediction 263 288 - -
Blo06g00953 288 SMART finulus 111 160 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00159 Blo-Chr4:1295872 Blo06g00953 Blo-Chr6:32757026 1.02E-38 dispersed
Blo06g00953 Blo-Chr6:32757026 Blo16g01050 Blo-Chr16:38996030 8.46E-129 dispersed
Blo11g00122 Blo-Chr11:913347 Blo06g00953 Blo-Chr6:32757026 5.95E-46 transposed
Blo12g00557 Blo-Chr12:23600040 Blo06g00953 Blo-Chr6:32757026 1.37E-47 transposed
Blo01g00481 Blo-Chr1:5281712 Blo06g00953 Blo-Chr6:32757026 5.81E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12519 PF00010 HLH 1.10E-12 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00953 - - jre:108993280 325.865