Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00971 ATGGATGGGAGTTGTACTGATGAAAGCACGGCTAGTGAATCCACCTCTATCTCTCCGGTGACTCCACTGGCTTTTCCGGTTACTAAGTGCTTTTCCCCGCCGGAGGGTCGGTACCGTGTGGGCAGCGGAACGAGTGTTGTTGTCGATTCCGATCAGTCGAGCGGGGTGGAAGCGGAGTCAAGAAAGCTCCCTTCCTCCAGGTTCAAAGGGGTGGTGCCGCAGCCCAATGGGCGGTGGGGGGCGCAGATTTATGAAAAGCACCAACGGGTCTGGCTCGGCACTTTTAACGAGGAGGATGAGGCAGCCCGAGCGTACGACGTTGCCGCCCAACGATTCCGCGGCCGCGATGCTGTCACTAATTTCAAGCCGCTTGACGACACTGCCGACGACGACGTCGAGTTGGCGTTTCTCAATTCCCATTCGAAATCCGAGATCGTTGATATGCTACGTAAGCATACCTACAGCGATGAACTGCAGCAGAGCAAACGAAGAAACGGGTTACTAAACGGCTATGGCAACCGAACAAGAGCCGTTGGGCTAACCGGCGCCGGACACGACAATGATTCCAAGGAACGTGAGCTGCTTTTCGAAAAGGGTGTGACCCCTAGCGATGTAGGAAAATTGAACCGTCTAGTGATCCCCAAGCAATATGCCGAGAAGCACTTCCCGTTGCAGAGTGGCGCCGCCTCATCCAAAGGCGTCCTTCTCAACTTCGAGGATGTCGGTGGAAAAGTATGGCGGTTCCGTTACTCGTATTGGAACAGCAGCCAAAGCTACGTTCTAACAAAAGGGTGGAGCCGATTCGTCAAGGAGAAGAACCTCCATGCCGGAGACATCGTCAGCTTCCTCCGGTCAACCGGACCGGAGAAACAGCTGTACATTGACTTCAAGGATCGGAATGGACCTGCGGTGGTGGTTGGGTTTTCGATTCCAAAGCCGCCGGTTCAGATAGTGAGACTATTTGGGGTGAATATCTTCAAAGTACCTGGAAAAGGTATTGGCAGTGTAGACTGCGCCGCCGCAACGGGTGGCTGCCATGGGAAGAGAATAAGTGATCAAGTAGAGCTTTTAGCTTTAGAGTGCAGCAAAAAGCAAAGGGTAATCGGAGCTCTG 1113 53.64 MDGSCTDESTASESTSISPVTPLAFPVTKCFSPPEGRYRVGSGTSVVVDSDQSSGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLDDTADDDVELAFLNSHSKSEIVDMLRKHTYSDELQQSKRRNGLLNGYGNRTRAVGLTGAGHDNDSKERELLFEKGVTPSDVGKLNRLVIPKQYAEKHFPLQSGAASSKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDIVSFLRSTGPEKQLYIDFKDRNGPAVVVGFSIPKPPVQIVRLFGVNIFKVPGKGIGSVDCAAATGGCHGKRISDQVELLALECSKKQRVIGAL 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32997555 32998667 + BLOR17554 Blo06g00971 62264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00971 371 Pfam AP2 domain 67 114 IPR001471 GO:0003700|GO:0006355
Blo06g00971 371 Gene3D AP2/ERF domain 66 123 IPR036955 GO:0003700|GO:0006355
Blo06g00971 371 SUPERFAMILY DNA-binding pseudobarrel domain 193 298 IPR015300 -
Blo06g00971 371 SMART rav1_2 67 128 IPR001471 GO:0003700|GO:0006355
Blo06g00971 371 MobiDBLite consensus disorder prediction 45 60 - -
Blo06g00971 371 ProSiteProfiles B3 DNA-binding domain profile. 196 300 IPR003340 GO:0003677
Blo06g00971 371 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 1 371 - -
Blo06g00971 371 Pfam B3 DNA binding domain 196 298 IPR003340 GO:0003677
Blo06g00971 371 Gene3D - 184 304 IPR015300 -
Blo06g00971 371 CDD AP2 66 121 IPR001471 GO:0003700|GO:0006355
Blo06g00971 371 SMART B3_2 196 300 IPR003340 GO:0003677
Blo06g00971 371 MobiDBLite consensus disorder prediction 41 62 - -
Blo06g00971 371 CDD B3_DNA 195 282 IPR003340 GO:0003677
Blo06g00971 371 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 371 IPR044800 GO:0003700
Blo06g00971 371 ProSiteProfiles AP2/ERF domain profile. 67 122 IPR001471 GO:0003700|GO:0006355
Blo06g00971 371 SUPERFAMILY DNA-binding domain 66 122 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00971 Blo11g00830 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01003 Blo-Chr3:36316066 Blo06g00971 Blo-Chr6:32997555 1.38E-57 dispersed
Blo06g00971 Blo-Chr6:32997555 Blo11g00830 Blo-Chr11:14148534 0 dispersed
Blo14g00593 Blo-Chr14:9848701 Blo06g00971 Blo-Chr6:32997555 2.52E-08 dispersed
Blo06g00971 Blo-Chr6:32997555 Blo12g00198 Blo-Chr12:12940147 1.71E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12521 PF02362 B3 2.00E-27 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00971 K09287 - vvi:100262843 488.419