Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00975 ATGGTCCGTGTCGAACCCGCCAATATTGTTGGTGTTCTCCGTTCAATCCAAGTTCGGTTTGAATCCGATTCTATCTCAATTTTTGTCGGGCGAGTTCCGGTCTTGGCCCACCTCTTGACCGTTTGGGCGCCAGCAAAACCTTGTTTATGCGCCGCCCCTGCTGATGAGGTGGCTTTTCAAAGTGAGTTGAGCTCGCTTAAATATTTCAACAGTTTTCTCATGGATTTTGCTGCTGCGTCTAATCATCCCTCTCGTGGTCGCCATGCAGAGTTTGCAACTGATGCTCTGTACAAGGAATTATGGCATGCTTGTGCAGGCCCACTCGTCACCCTTCCTCACGAAGGGGAGCGTGTTTATTACTTTCCACAGGGTCACATGGAACAGGCTGAACCTGACACAGATGAAGTTTATGCACAAATAGCTTTGCTACCTGATAGAGATCAAAGTGAAGTATCAAGCCCTGATCCACCTGTCCTTGAACCTCCTAGATGCACCGTCCATTCATTTTGCAAGACACTTACTGCTTCTGATACTAGCACACACGGTGGCTTCTCTGTTCTGAGGAGGCATGCAGATGATTGTCTGCCACCATTGGATATGTCACAGCAACCACCATGGCAAGAATTGATTGCTACTGATTTGCATAAAAATGAATGGCATTTTAGGCACATTTTTCGAGTTCTTGCTACTGCATCACATGCTGTTGCTACTGGAACACTATTTTCCGTGTTTTACAAACCAAGAACAAGTAGGTCTGAATTCATTGTAAGTCTGAACAAGTACCTTGAAGCTCAAAGCCACAAGCTTTCCGTTGGGATGAGGTTTAAGATGAGATTTGAGGGGGAGGAAGTTCCTGAAAGAAGGTTCAGTGGCACGATTGTTGGTGTTGGAGATAATATATCATCTGGCTGGGTTGATTCTGAGTGGCGATCTTTAAAGGTTCAATGGGATGAACCTTCATCCATCTTCCGTCCAGAACAAGTTTCAGCTTGGGAATTGGAACCTCTTGTTCCGACTAATCCTCCAAGCTGCCAGCCAACACAAAGGAGCAAGCGGGCACGACCTGCTGTTTTATCTTCCCCAGTCCCAGAGATATCTGTGCTTGGTGGATGGAAACCTCCAATTGAATCTTCTACATTTTCATATTCCGATCCACAGCGTGGAAAGGAGGTCTACCTATCGCCAAAGTTCAGCTCTACTGCAATTGCAAGCTCTTTTGGCTTTAATCGAAATGGCTCTCTTGGTTCAATTTCCAACAAATCATTGCATTGGACTAATCAGGTGGAATCTGTTACAGAATCTTTTTCCCCACTTGCTAACAACAAAGCTACTGAAAAGAAGCAAAGTACTGGGAATGGATGCAGAATCTTTGGAATTGAGCTACTTAGCAATTCCACATTAGAAGATGCTTCCCCTGCTACAGTTTCTAGGATGACAGTGGCTGATCGGCCTATTCCATCATTAGAGACTGAATCTGACCAGCATTCTGAACCATCAAATGTTAATCGATCTGATATTCCTTCAGTGAGTTGTGATGCTGAAAAATCATGCCTGAGATCTCCATATGATTCTCAGTGTAGGCAAATTCGTAGTTGCACAAAGGTTCACATGCAAGGGATTGCAGTGGGGAGGGCTGTGGACTTGACGCGATTTGATCGTTATGATGATCTGCTGAGGAAGCTGGAGGAAATGTTTGACATTGAGGGTGAGCTCTGGGGACCTACAAAGAAATGGCAAGTTGTCTATACTGATGATGAGGGTGACATGATGATGGTTGGGGATGATCCATGGCATGAGTTCTGCAGTATGGTGAGGAAGATCTCGATCTACACAACGGAGGAAGTAAAGAGATTGTCTCCCAAGATAAAACTTGCAGCCAGAGATGAGACTAAGCCAAGAAATCCAGATTCTGAAATAGCCATCAACACCGAGGACAACTAG 1941 45.08 MVRVEPANIVGVLRSIQVRFESDSISIFVGRVPVLAHLLTVWAPAKPCLCAAPADEVAFQSELSSLKYFNSFLMDFAAASNHPSRGRHAEFATDALYKELWHACAGPLVTLPHEGERVYYFPQGHMEQAEPDTDEVYAQIALLPDRDQSEVSSPDPPVLEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELIATDLHKNEWHFRHIFRVLATASHAVATGTLFSVFYKPRTSRSEFIVSLNKYLEAQSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNISSGWVDSEWRSLKVQWDEPSSIFRPEQVSAWELEPLVPTNPPSCQPTQRSKRARPAVLSSPVPEISVLGGWKPPIESSTFSYSDPQRGKEVYLSPKFSSTAIASSFGFNRNGSLGSISNKSLHWTNQVESVTESFSPLANNKATEKKQSTGNGCRIFGIELLSNSTLEDASPATVSRMTVADRPIPSLETESDQHSEPSNVNRSDIPSVSCDAEKSCLRSPYDSQCRQIRSCTKVHMQGIAVGRAVDLTRFDRYDDLLRKLEEMFDIEGELWGPTKKWQVVYTDDEGDMMMVGDDPWHEFCSMVRKISIYTTEEVKRLSPKIKLAARDETKPRNPDSEIAINTEDN 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33043786 33057027 - BLOR17558 Blo06g00975 62268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00975 646 MobiDBLite consensus disorder prediction 626 646 - -
Blo06g00975 646 Gene3D - 272 339 - -
Blo06g00975 646 PANTHER AUXIN RESPONSE FACTOR 1 227 616 - -
Blo06g00975 646 SUPERFAMILY CAD & PB1 domains 532 609 - -
Blo06g00975 646 MobiDBLite consensus disorder prediction 484 507 - -
Blo06g00975 646 Gene3D - 525 619 - -
Blo06g00975 646 ProSiteProfiles PB1 domain profile. 530 623 IPR000270 GO:0005515
Blo06g00975 646 Pfam AUX/IAA family 529 566 IPR033389 -
Blo06g00975 646 Pfam AUX/IAA family 577 620 IPR033389 -
Blo06g00975 646 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 93 226 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo06g00975 646 MobiDBLite consensus disorder prediction 626 640 - -
Blo06g00975 646 PANTHER AUXIN RESPONSE FACTOR 1 93 226 - -
Blo06g00975 646 MobiDBLite consensus disorder prediction 337 356 - -
Blo06g00975 646 Pfam Auxin response factor 231 313 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo06g00975 646 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 227 616 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo06g00975 646 SUPERFAMILY DNA-binding pseudobarrel domain 158 258 IPR015300 -
Blo06g00975 646 Gene3D - 166 271 IPR015300 -
Blo06g00975 646 MobiDBLite consensus disorder prediction 491 507 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00258 Blo-Chr3:5469379 Blo06g00975 Blo-Chr6:33043786 1.00E-100 dispersed
Blo06g00975 Blo-Chr6:33043786 Blo16g00290 Blo-Chr16:6964416 3.32E-37 dispersed
Blo06g00975 Blo-Chr6:33043786 Blo02g01158 Blo-Chr2:43201649 7.23E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00975 K14486 - zju:107425358 643.269