Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00980 ATGGGCTGCGTTTGCTCAAAGGGGAGCAAAGGGTCTGAGAAAGACTTTACCTTGGAGAATCACTCGAAGGGAAAACAACTCAAAGCAAACAAATCGTCTAGACTGTTGGGTTCCTCCTTGAGAAGAGAGGAGGCTGCAGTAGATGGCGATGGAGGTGCAAATGAAGCGATGACGAGGTTAATATCTGTAGATCCAAGGGAAGAGAACCTAGGATCCACTCCACTATCGGATTATGCTGAGAAAAATGTAATTGCTATTGAGAAACCTGCAAAGCCACAGCTTCAAAGACATTCAACCATGCAGCCTACACCAAGTGGAGAACTTGTACGTCCTAAAGTATCGAGGATAGCTACTATTAGTAATGGGGAGAGAGGAGCACAGGTAGTTGCTGGATGGCCCTCTTGGTTGACTTCAGTGGCGGGAGAGGCAATTAATGGATGGGTGCCTCGAAGAGCAGACTCATTCGAGAAGTTGGAGAAGATTGGACAAGGAACTTACAGCAGTGTGTATAGAGCTCGTGATTTAGACACAAACAAGATGGTTGCATTAAAGAAGGTTCGATTTGCTAATATGGATCCTGAAAGTGTTCGTTTTATGGCAAGGGAAATTCTTATCCAGCGTAGGCTTGATCATCCAAATGTCATGAAACTCGAAGGGTTGATTACTTCTAGAGTTTCTGGCAGTTTGTACCTCATATTTGAGTATATGGAGCACGATCTTGCAGGGCTAACAGCAATGCCAGGGTTCAGGTTCACTGAATCACAGATAAAATGTTACGTGCAAGAGCTACTTCGTGGTCTTGAACATTGTCACAATCAGGGTGTTTTGCACCGTGACATCAAGGGCTCAAATCTACTAATTAACAATGATGGCAATCTGAAAATCGGAGATTTTGGTCTTGCCACCTTCTTCCATTCCCCTCAGAAGCAGCCCCTTACAAGTCGCGTTGTAACTCTATGGTATCGGCCACCTGAGCTTCTGCTGGGGGCTACAGACTATGGAGTTGCTGTGGATTTATGGAGTACTGGCTGCATTTTTGCAGAATTGTTAGCTGGGAAGCCTATAATGCCAGGAAGAACAGAGGTGGAACAATTGCATAAGATTTTCAAGCTTTGTGGGTCGCCTTCTGAAGAGTATTGGAAGAAGTCAAAACTACCCCATGCAACCATTTTTAAACCCCAACATCCTTACAGCCGTGTTGTTTCTGAGACATTTAGCAACTTTCCTTCATCTGCCTTAGCTCTTCTAGATGTTCTTCTTGCGATAGAACCCGAGGATCGAGGAACTGCTTCTTTTGCACTTCAGAATGAGTATTTCACCACAAGACCACTGCCCTCTGACCCATCCACATTGCCAAAATACCCCCCAAGCAAGGAGTTTGATGCCAAGCTTCGAGAAGAGGAAGTAAGGAGGCAAAAAGCAGCTGTCGGTGTGATACGAGATCGTGATCCAAACAGAAAAAGCAACAAAGAATCTAGAGCTGTTCCTGTGCCGGATGCCAATGCTGAATTGCAGGCATCCATAAATAAGCGACAAGGGCATTCTAATCCGAAGAGCATGAGCGAGAAGTTTGCTCCTGAAGAAGATGGTGGCTCAGGCTTTCCTATCGAACCTCCAAGAGGGGCAGCCATCAGTGCTTTATCCCATTCGGGCCAGTTAATGCATTCTAGTGCATTTGGATCTTCACAAAACACGAATGTCAATGAGGGTGATTCTCTCAGAGACGTGGGTTCCATTCAAGCGACTGAAGTGGAATTAAGATCACAAAGATCGTCCATGCATCGCGGGGCATCCCAGTTATCGCGGTTTTCCAATTCTGTCGCAATTAGGGGCAATTCACAGTTTGATAGCGTCGGGGAAAGTGTTGGGAATCCTCACTGGCCGGAGGAACGATTTAGTTCCAGATACAACCATTTGAATGGCGGAGAGATCTCTGAAAATCATGACTGGGCACGCCATTTGCTGGACAAGCCCAAGTTGTTGCATAAGAAGGATGAGCAGCAATCTGGAAAGGAATCTGCAATGGGCCACCTCGTGAAGAAAAATAGAATCCACTTCTCGGGGCCATTGATGCCTGCAGACGGAAACCTGGACGAAATGCTAAAGGAGCATGAAAGACAAATCCAGCATTCCGTCCGCAAAGCTCGATTGGACAAAGCCAAGACTAAGAAAACAAGCATCGACAATGGACAAACGCAATCCCTGCTCCACCATAGCTTCACCCCCATTGCTTCGATACGGAAGACGGAGCAACTCCAGATTCCGAAGATTGATGGATCGTCTCTCAGGCCAGGCCAGAGCTTTGCAGAAGAAAATCCCGACTTTAAAGCCTCCATTTTTATTTTAAGCTTAAATGCTGCTGAGGAGGTGAACATTGATTAA 2382 45.97 MGCVCSKGSKGSEKDFTLENHSKGKQLKANKSSRLLGSSLRREEAAVDGDGGANEAMTRLISVDPREENLGSTPLSDYAEKNVIAIEKPAKPQLQRHSTMQPTPSGELVRPKVSRIATISNGERGAQVVAGWPSWLTSVAGEAINGWVPRRADSFEKLEKIGQGTYSSVYRARDLDTNKMVALKKVRFANMDPESVRFMAREILIQRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLTAMPGFRFTESQIKCYVQELLRGLEHCHNQGVLHRDIKGSNLLINNDGNLKIGDFGLATFFHSPQKQPLTSRVVTLWYRPPELLLGATDYGVAVDLWSTGCIFAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYSRVVSETFSNFPSSALALLDVLLAIEPEDRGTASFALQNEYFTTRPLPSDPSTLPKYPPSKEFDAKLREEEVRRQKAAVGVIRDRDPNRKSNKESRAVPVPDANAELQASINKRQGHSNPKSMSEKFAPEEDGGSGFPIEPPRGAAISALSHSGQLMHSSAFGSSQNTNVNEGDSLRDVGSIQATEVELRSQRSSMHRGASQLSRFSNSVAIRGNSQFDSVGESVGNPHWPEERFSSRYNHLNGGEISENHDWARHLLDKPKLLHKKDEQQSGKESAMGHLVKKNRIHFSGPLMPADGNLDEMLKEHERQIQHSVRKARLDKAKTKKTSIDNGQTQSLLHHSFTPIASIRKTEQLQIPKIDGSSLRPGQSFAEENPDFKASIFILSLNAAEEVNID 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33101410 33106711 + BLOR17563 Blo06g00980 62273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00980 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Blo06g00980 793 CDD STKc_CDK9_like 155 439 - -
Blo06g00980 793 MobiDBLite consensus disorder prediction 89 109 - -
Blo06g00980 793 SMART serkin_6 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00980 793 Pfam Protein kinase domain 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00980 793 PANTHER KINASE CDK9, PUTATIVE-RELATED 102 719 - -
Blo06g00980 793 MobiDBLite consensus disorder prediction 1 36 - -
Blo06g00980 793 Gene3D Phosphorylase Kinase; domain 1 150 242 - -
Blo06g00980 793 MobiDBLite consensus disorder prediction 458 493 - -
Blo06g00980 793 PANTHER CELL DIVISION PROTEIN KINASE 102 719 - -
Blo06g00980 793 MobiDBLite consensus disorder prediction 441 542 - -
Blo06g00980 793 ProSiteProfiles Protein kinase domain profile. 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00980 793 Gene3D Transferase(Phosphotransferase) domain 1 243 478 - -
Blo06g00980 793 MobiDBLite consensus disorder prediction 12 26 - -
Blo06g00980 793 ProSitePatterns Protein kinases ATP-binding region signature. 161 184 IPR017441 GO:0005524
Blo06g00980 793 MobiDBLite consensus disorder prediction 505 519 - -
Blo06g00980 793 SUPERFAMILY Protein kinase-like (PK-like) 148 446 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00980 Blo16g01036 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01669 Blo-Chr1:56440737 Blo06g00980 Blo-Chr6:33101410 6.85E-14 dispersed
Blo06g00980 Blo-Chr6:33101410 Blo12g00827 Blo-Chr12:26610950 0 dispersed
Blo17g00605 Blo-Chr17:11901422 Blo06g00980 Blo-Chr6:33101410 3.15E-149 dispersed
Blo06g00980 Blo-Chr6:33101410 Blo03g00652 Blo-Chr3:27727342 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84351 PF00069 Pkinase 2.50E-67 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00980 - - jre:108988935 985.326