Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00985 ATGTTGCGCCTGGCATCGAGGCAGACGACGCTGGGCTACAACTCGGGGAAGGTTGGGTTGTGCCCCAAGCCTCTCGGCCTGGTAGCGGCCTCTTTGCTAGGCCGAGTCGGGGCTCAACCATATGGGGTCGTGAATCAGATTGATGTCGTTAAGAACTTTAACGATGTTGGCGTTGTAAAATGTTCAATTCTTCATTTTTTTCCCTGTGAATGTAATTATTTTGACTTGGACGTGAACAACGTGTCGTATCATGCAAGTTCTGAACTTGTGTCCAAGTGCCAAAATTTAATTTGCCATATGAATATCGAGGTGAGGTTTGAGTGGGACCACTACCGAAAAAAGTTGACTGGTGAGCCTTTCTCGATCAGAATCGATAAATCTCTTAATCTTCCAGCGTTAGCATCAGATCCAGATGCAGAGGTAATAGCACTATCTCCAAAAACACTAATGGCCACAAACAGGTTCATATGTGAAGTATGCAACAAAGGGTTTCAAAGGGAGCAAAATCTACAGCTCCACAGAAGAGGACATAACTTACCTTGGAAGCTAAAGCAGAAGACTACAAAAGAGCCAAAGAGGAAGGTTTATCTCTGTCCTGAGCCCACATGCGTCCACCATGACCCTTCAAGAGCCCTAGGCGACCTTACAGGAATCAAAAAACACTACTCTCGTAAACATGGCGAGAAGAAATGGAAGTGCGAGAAGTGTTCCAAAAGATACGCCGTTCAGTCTGATTGGAAGGCTCATTCTAAAACCTGTGGAACGAGGGAGTATCGATGCGATTGTGGCACTCTTTTCTCCAGGCGAGACAGCTTCATCACACACCGGGCTTTCTGCGACGCGTTAGCTCAAGAAACTGCGAGACACCCGCCAACCTTGACGAACGCCATGGGAAACCATTTGTTTGGAGGTGGAAGCAATGCAGGCTTAGGTTTATCTCAGGTGGGTCAACAAATCTCTTCCTTGCAAGATCAAACCAATCAATCAACAGACATTTTACGGGCCGGGCAATTCAACAATCTCTTGCATGGCCAGTCGATTGCATCGTCATTCCGTCCTCAGCCTTCAATGGCTTCCTCAGCTTTCTTCTTGACAGACCAAAGTAATCAGAGTTTTCACGAAGAAAGCCTTTCTCAACAAGGGTTGTTGCCAAACAAATCATTTCATGGGCTGATGCAATTTTCTGACCTCCAATCCAATCCAACCAATTCTCCAAATGCCAATCTCTTCAACCTAGGGTTCTTATCAAATTCCAGCAACAACGCACGAAACAACAGCGACAATAATAACATCTTGATGTCTAGTCAGTTCAACATCGGACCGAACGGAAATGGTAGTGAAGCTTCGAATGTATATGCAATGGGGGATCAAATCGGCTCGAATTCAGTTCCTTCTCTCTACACAACTTCAATTGAAAACAACACCAGTATTCCTCACATGTCAGCCACTGCTCTACTTCAAAAGGCTGCTCAACTAGGCTCAACCACTTCGGCCAACAACACGAGCGCCTCTTTGCTTCGATCGTTGGGAAGCACTTCCTCCGGCGGACCAAAATCGGAAAGGTCGATGCTTCCGACTAATATGAACGCCATTTTCAGCGAGAACGAGCACCACCATCTGCAAGACCTGATGAACTCATTTTCCACCGGAAACTCCGCCTTTTTCTCCGGCGGGTCCGGAGGAATCACTGCTTTTGGTGGGTATGAAGGAAGCAGAAGCAACATAGAAAATCTGGAAGAACCAAAACTTCATCAAACTCCATCTGTGAGCATTGGAGGATCAGATAGATTAACAAGAGATTTCCTAGGAGTTGGACAAATTGTTAGAAGTATGAGCGGGGGGTATTCTCAAAGAGAACAAAAACAACAACAACAACAACAACAACATGGAATCGATCACATTGGTTCCATTAATACAGATCAGAGCAACAATGCAGCAGCTCCTTCCAGCCAATCCTACGGAGGAGGAAGAAGAAGTTTTCAATGA 1986 45.67 MLRLASRQTTLGYNSGKVGLCPKPLGLVAASLLGRVGAQPYGVVNQIDVVKNFNDVGVVKCSILHFFPCECNYFDLDVNNVSYHASSELVSKCQNLICHMNIEVRFEWDHYRKKLTGEPFSIRIDKSLNLPALASDPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQETARHPPTLTNAMGNHLFGGGSNAGLGLSQVGQQISSLQDQTNQSTDILRAGQFNNLLHGQSIASSFRPQPSMASSAFFLTDQSNQSFHEESLSQQGLLPNKSFHGLMQFSDLQSNPTNSPNANLFNLGFLSNSSNNARNNSDNNNILMSSQFNIGPNGNGSEASNVYAMGDQIGSNSVPSLYTTSIENNTSIPHMSATALLQKAAQLGSTTSANNTSASLLRSLGSTSSGGPKSERSMLPTNMNAIFSENEHHHLQDLMNSFSTGNSAFFSGGSGGITAFGGYEGSRSNIENLEEPKLHQTPSVSIGGSDRLTRDFLGVGQIVRSMSGGYSQREQKQQQQQQQHGIDHIGSINTDQSNNAAAPSSQSYGGGRRSFQ 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33134731 33141885 + BLOR17568 Blo06g00985 62278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00985 661 SMART c2h2final6 196 226 IPR013087 -
Blo06g00985 661 SMART c2h2final6 155 177 IPR013087 -
Blo06g00985 661 SMART c2h2final6 231 251 IPR013087 -
Blo06g00985 661 Pfam Zinc-finger double-stranded RNA-binding 155 177 IPR022755 -
Blo06g00985 661 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 125 620 - -
Blo06g00985 661 Gene3D Classic Zinc Finger 209 288 - -
Blo06g00985 661 SUPERFAMILY beta-beta-alpha zinc fingers 154 251 IPR036236 -
Blo06g00985 661 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 125 620 - -
Blo06g00985 661 MobiDBLite consensus disorder prediction 612 661 - -
Blo06g00985 661 ProSitePatterns Zinc finger C2H2 type domain signature. 157 177 IPR013087 -
Blo06g00985 661 Gene3D Classic Zinc Finger 134 203 - -
Blo06g00985 661 ProSiteProfiles Zinc finger C2H2 type domain profile. 155 177 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00985 Blo-Chr6:33134731 Blo11g00867 Blo-Chr11:16496454 0 dispersed
Blo06g00985 Blo-Chr6:33134731 Blo07g01404 Blo-Chr7:34080193 2.16E-102 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12523 PF12171 zf-C2H2_jaz 4.10E-05 CL0361 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00985 K25870 - jre:109006348 629.787