Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00995 ATGGTCGGAACTAGTCCTGAGGCTGCTTGTGTTCGGGGGAGAGTGATGTCGAATGTGGGCGGGGTCGGGAGCAAGAAGAGGAGGAGCGAGAGGGTTTATAAGTTCAAGAGGTTTGGCGAGAATGGGTATCCGGCTGAGTTAGTGGGTGGATCGTTTAGAGAGAATGTGAAGGCTCTGGTTGAATATGGGCATTTGGAGAGTGAGTTCTGGAGGGGATTGAGAAGTTGGTCTTTTCAGCTGGAAGTGAATAGACATCCTCCTTTTCATCTTCTTCTCTTTGTTGTTGAGGAACCCATTGAAGCTTCCCCCAATCTCCATTGTAAGCCATGCCAATTTGTAGGCTGGGGGCATCATATGATCTGCAACAAGAAGTACCATTTTCTGTTGCCCTCCAAAGACACCTTATTGGCTGCATGCTTTGGCAACAATGGAGGAGATAATTGGTGGGGAAAGGTTGCAGATTTAGGCGGCCACATCTTGCATGGCGTCTTCCACTCCAATGGCTTCGGCCATCTGCTCTCCCTTAATGGTTTCGAAGCTGGCTCTGACCTCCCCGGCCATTCTGTAATGGATTTGTGGGATCGTCTCTGTACTGGACTCCGGGCAAGGAAAGTGAGTTTGAAAGACGTTTCGGAGAAGAAAGGGATGGAACTGAGGCTTGTTTATGGAGTTGCAGAGGGGCAGCCATGGTTTCACCGCTGGGGCTACTCGTTTGGCAGAGGGACCTTCTGCGTCACCCCGGAAATGTACGAGAAAGCCATTGAAGCCATTAGAACTATTCCCCTAACCTTCCTTCTTCCTCATCTCCACTTCGTCTTCTCCAAATACCAAGCACTTTCCGAAAACTCCATAGCCAACCTCGGCGACCTCTTCCACTTCCTCCTCCAACTCAAATCGAGGATTCCCACCCAAAATTCTGCCGATTCATTTTCAAATCAGATTGGAATTCTTACCGAGAATTCCTGCCGGTGGTCACCCAAGAGAGTGGAAATGGCAGTCAGAGTGATCGTGGAATCGTTGAAACAAGCCGAATTCCGGTGGGTTTCCCGGCAAGAAGTTAGAGATTCTGCCCGTGTTTACATCGGCGATACTGGTCTGCTTGATTTCGTGTTGAAATCGTTAGGAAATCACGTGGTCGGAAAATATCTTGTTCGCCGGAGCTTAAATCCGGTCACTAAAGTTCTTGAATATTGCTTGCAAGACATTTCGAATCCGTTTCCCAATCAAGAATGTGGATTATTTCTTCCAAATTCAAAAGGAAAAACGCGAACCGAGATGATAAATCGAGCTCAGATAACCAAAGACATGGTTTGTCTCTACAAAGCCATCTTCTCCGACCAGACAAACACTCCGATTTCTTCAGCTATATCAATGGCCGCCAGAATAATCCTCGATTCAAAATACCTTACAAAGGATTACGAACATGGGTTCGATGCCGGAAAACGGCATCTCTTCTGCACCGTGGAGCTCAAGGAATCCATCACGCCGCCTCCATACGAGAGTTTCACGCTGAAAACAGGTTCCACCATTGATGAACTCAAGCGAGAAGTGGAAAAAACTTTCAGAGAATTATACTACGGACTGAGGACCTTCCAAGTGGAATCAATCGTCAATTTGAACGCAAATGGGTCAGACGCAGTATTGAATATGGTGGAACACGGACGAAAATTGGTTTTTGAGGGAAGCGATAGAGAGAGAAAGAGAATGGAGGAGATATATGAATATGGCGATATGCAGACGAAGGTGGTGGATTGCAGGTGTGGAGCTGAGGAAGACGATGGAGAGCGCATGATTTGCTGTGATATTTGCGAGGCGTGGCAACACAGTCGATGCGTTCATATTCCAGACGATGAAGAAATTCCCACCATTTTTCTCTGCAATCGATGCGACACAGAAATCCTGCTCCTTCCTTCTCTACCATGA 1923 47.32 MVGTSPEAACVRGRVMSNVGGVGSKKRRSERVYKFKRFGENGYPAELVGGSFRENVKALVEYGHLESEFWRGLRSWSFQLEVNRHPPFHLLLFVVEEPIEASPNLHCKPCQFVGWGHHMICNKKYHFLLPSKDTLLAACFGNNGGDNWWGKVADLGGHILHGVFHSNGFGHLLSLNGFEAGSDLPGHSVMDLWDRLCTGLRARKVSLKDVSEKKGMELRLVYGVAEGQPWFHRWGYSFGRGTFCVTPEMYEKAIEAIRTIPLTFLLPHLHFVFSKYQALSENSIANLGDLFHFLLQLKSRIPTQNSADSFSNQIGILTENSCRWSPKRVEMAVRVIVESLKQAEFRWVSRQEVRDSARVYIGDTGLLDFVLKSLGNHVVGKYLVRRSLNPVTKVLEYCLQDISNPFPNQECGLFLPNSKGKTRTEMINRAQITKDMVCLYKAIFSDQTNTPISSAISMAARIILDSKYLTKDYEHGFDAGKRHLFCTVELKESITPPPYESFTLKTGSTIDELKREVEKTFRELYYGLRTFQVESIVNLNANGSDAVLNMVEHGRKLVFEGSDRERKRMEEIYEYGDMQTKVVDCRCGAEEDDGERMICCDICEAWQHSRCVHIPDDEEIPTIFLCNRCDTEILLLPSLP 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33203332 33205550 - BLOR17578 Blo06g00995 62288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00995 640 PANTHER PHD FINGER PROTEIN MALE STERILITY 1 23 640 - -
Blo06g00995 640 CDD PHD_MMD1_like 584 629 - -
Blo06g00995 640 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 23 640 - -
Blo06g00995 640 SUPERFAMILY FYVE/PHD zinc finger 571 631 IPR011011 -
Blo06g00995 640 SMART PHD_3 584 630 IPR001965 -
Blo06g00995 640 Pfam PHD-finger 585 631 IPR019787 -
Blo06g00995 640 ProSitePatterns Zinc finger PHD-type signature. 585 629 IPR019786 -
Blo06g00995 640 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 572 633 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00995 Blo-Chr6:33203332 Blo18g00476 Blo-Chr18:5620287 1.56E-124 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12524 PF00628 PHD 2.10E-08 CL0390 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00995 - - jre:109005539 785.408