Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01000 ATGTTTCTTCGGGACTTCTGGCTTGTAGTCCTCTTTTTCGGCGTCTGCTTCGAAGCTCAGCTCCTGCATTCTCAAAACCTAATCTGCAATTCAGATGATTTGCAGGCATTGGAAGATGTCTTCAAGGGTATGGACTCTAAAATCAACGGCTGGGGCACTAACGTTTCGACTGATTGCTGCGTCTGGCCTGGAGTCACTTGCAATTCTTCGTCGACTGTGGGGGTTAATGTTACTTTAGAGACTGGTAGAGTTGTCAAGATCGAACTTGGTGGAAAGAAACTAACGGGGAATCTTTCTGACTCCATTGGCAGGCTGGAGCAGCTTCAACTTCTCAATCTCTCTCAAAATTTTCTAAAGAGTTCGATTCCTTCGTCGTTGTTCCAGCTCCCCAAATTAGAGGTACTCGACCTAAGCTCCAATGATTTGATCGGCGTTATTCCGGCGACCTTCAATCTACCTGCGATTCAGCGGCTTGATTTGTCTCAGAACTACTTGAGCGGGTCTCTCCCATCTGATTTATGCCATAACTCTTCCAGAATTAGGGTGTTGGATCTGGGTTTCAACAATTTCTTCGGCAGTCTTCCTTCGGGAATTGGCAATTGCACCTTCTTAGAAACCTTCTCGCTGGAGACTAATGACCTCACCGGCGACATTCCCGACGACTTATTTAGGTTGCAAAAATTGACCTTGTTGAGCCTCCGAGACAACCTGTTTTCAGGGCAGCTGAGCAAGCTGATTGGTAATCTCCCAAACCTTGTTCGCCTGGATATTGCTTACAATAGATTTTCAGGAGAACTTCCAGATGTTTTTTACTCCAAAAATTTGCAGTTCTTAGTGTTCGAATCTAACAATTTCACTGGTCAAATACCGAATTCGTTATCTAGTTCTCCGTCGATAAATCTCCTAAACTTGAGGAACAATTCTTTGACGGGTCTCATCCATATTAACTGTTCAACCATGGCTAACCTGACCTCTCTTGATTTGGGAACTAATTCGTTTTACGGCCCTGTTCCAAGCAATCTTCCATCTTGTCGACAGCTAAAAAACATAAATCTAGCCCGAAATAACTTCACCGGAGATATCCCTGAAACCTTCAGGAATTTTCAGAGCCTTTCTTATCTTTCACTGTCCAATTCAAGCATAGGCAATCTCTCATCTGCACTTAACATCTTGCAGCACTGCAAGAACTTGAGCACTTTAGTCCTTACCCTGAACTTCCATGATGAAGAACTGCCTTCTGATCCTACCCTTAATTTTGAAAACCTCAAGGTTTTGATTATAGCCAGTTGTAGACTAAAGGGTGTAATGCCAGAATGGTTGAGGCAGAGTTCGAAATTGCAGTTGTTGGATTTATCGTGGAACAGACTAGGTGGATCTATTCCGGACTGGTTTGGTGATTTTCAGCTTCTGTTTTACTTGGATTTATCGAACAACTCATTTACAGGAGAGATTCCAATAACCATAACTAGATTGCCGAGCCTTATTAATCGAAACATTTCCTTTGAAGAACCTTCTCCGGATTTCCCCTTTTTTATGAAAAGAAATGTAAGTGCACCATTGAAGTACACTCAAGTTTTGAGTTTTCCTCTCACCCTGGAGCTTAGCAACAACAATCTGAGTGGATCAATCTGGCCGGATTTTGGAAATCTGAGAAAGCTCCAAGTCTTGGATCTGAAATTCAATAATCTTTCAGGAGAAATTCCGAGCACGTTATCAGGGATGACAAGCCTGGAGACTTTGGATTTGTCGCATAATAACCTTACCGGAACAATACCACAATCATTAGTGAGACTGAGTTTCTTGTCTAAGTTCAGTGTTGCTTACAATCAGTTAAGTGGGGTAATTCCTTCAGGCGGTCAGTTTCAAACCTTCCCTAATTCAAGCTTTGAAGGAAATAATCTCTGCGGCGATCATGCTCCTCCTTGTCCGTCAAATGATCACGGCTTATTTCCATCACCTGGAAGATCAGGAAGGAGCCAAGGAAGTATCATTGGTATGGCTGTCGGGATTTCGTTTGGAACTGCTTTCCTTCTTGTTCTACTGATTCTGATTGGGCTTCGGACTCATAGCAGAAGAAATGTGGATCTCGAAAGAAAGGTTGCTAACTCTAATGATAAGGATTTAGAGGAACTTGGATCAAAATTGGTAGTTTTGTTCCAAAACAAAGAGAACAATAAAGGACTCAGCATAGACGATCTTTTGAAATTAACTGACAATTTCGACCAGGCAAACATTATTGGGTGCGGGGGCTTCGGCCTTGTTTACAGAGCCACCCTTCCTGATGGTAGGAGAGTGGCAATCAAACGGCTCTCGGGGGATTGCGGACAGATAGAAAGAGAGTTTCGTGCAGAAGTCGAAACTCTCTCCCGAGCTCAGCATCCTAATCTTGTTCTTCTGCAGGGCTATTGCATTTATAGAAACGACAGGCTCTTGATATATTCTTACATGGAGAATGGCAGTTTGGATTATTGGCTGCATGAAAAATTTGATGGCCCTTCTTGTCTAAGTTGGGAGACTAGGCTCGGAATTGCTCAAGGGGCTGCAAGGGGACTAGCGTACTTACACCAATCGTGTGAGCCGCATATCCTTCATCGAGACATCAAATCGAGCAACATCCTTTTAGACGAGAATTTCGCTGCCCATTTGGCCGATTTTGGTCTCGCTAGGCTCATACTTCCTCACGATACACACGTGACGACTGATCTAGTAGGGACTTTAGGGTACATTCCGCCCGAGTATGGGCAAGCCTCGGTTGCTACTTACAAGGGAGATGTCTATAGTTTTGGAGTTGTTCTTTTGGAACTTTTGACCGGAAAAAGGCCGATGGATATATGCAAGCCTAAAGAATGTCGGAATTTGATCTCTTGGGTGTTCCAAATGAAGAAGGAAGGCAAAGAAACCGAAGTTTACGATACTTTTATTTACGAAAAGCATCACAGCAAGCAAATGTCGCGGGTTCTTGAAATAGCATGTCTCTGCCTGAATGAATATCCGAAAAGCCGTCCTTCCACTATGCAGCTAGTTTCTTGGCTTGACAACATAATCTAG 3048 43.37 MFLRDFWLVVLFFGVCFEAQLLHSQNLICNSDDLQALEDVFKGMDSKINGWGTNVSTDCCVWPGVTCNSSSTVGVNVTLETGRVVKIELGGKKLTGNLSDSIGRLEQLQLLNLSQNFLKSSIPSSLFQLPKLEVLDLSSNDLIGVIPATFNLPAIQRLDLSQNYLSGSLPSDLCHNSSRIRVLDLGFNNFFGSLPSGIGNCTFLETFSLETNDLTGDIPDDLFRLQKLTLLSLRDNLFSGQLSKLIGNLPNLVRLDIAYNRFSGELPDVFYSKNLQFLVFESNNFTGQIPNSLSSSPSINLLNLRNNSLTGLIHINCSTMANLTSLDLGTNSFYGPVPSNLPSCRQLKNINLARNNFTGDIPETFRNFQSLSYLSLSNSSIGNLSSALNILQHCKNLSTLVLTLNFHDEELPSDPTLNFENLKVLIIASCRLKGVMPEWLRQSSKLQLLDLSWNRLGGSIPDWFGDFQLLFYLDLSNNSFTGEIPITITRLPSLINRNISFEEPSPDFPFFMKRNVSAPLKYTQVLSFPLTLELSNNNLSGSIWPDFGNLRKLQVLDLKFNNLSGEIPSTLSGMTSLETLDLSHNNLTGTIPQSLVRLSFLSKFSVAYNQLSGVIPSGGQFQTFPNSSFEGNNLCGDHAPPCPSNDHGLFPSPGRSGRSQGSIIGMAVGISFGTAFLLVLLILIGLRTHSRRNVDLERKVANSNDKDLEELGSKLVVLFQNKENNKGLSIDDLLKLTDNFDQANIIGCGGFGLVYRATLPDGRRVAIKRLSGDCGQIEREFRAEVETLSRAQHPNLVLLQGYCIYRNDRLLIYSYMENGSLDYWLHEKFDGPSCLSWETRLGIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDENFAAHLADFGLARLILPHDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDICKPKECRNLISWVFQMKKEGKETEVYDTFIYEKHHSKQMSRVLEIACLCLNEYPKSRPSTMQLVSWLDNII 1015
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33238522 33241569 + BLOR17583 Blo06g01000 62293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01000 1015 ProSiteProfiles Protein kinase domain profile. 740 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g01000 1015 Gene3D Ribonuclease Inhibitor 250 340 IPR032675 -
Blo06g01000 1015 Gene3D Phosphorylase Kinase; domain 1 699 815 - -
Blo06g01000 1015 Gene3D Ribonuclease Inhibitor 30 176 IPR032675 -
Blo06g01000 1015 Gene3D Transferase(Phosphotransferase) domain 1 816 1014 - -
Blo06g01000 1015 Pfam Leucine rich repeat 421 479 IPR001611 GO:0005515
Blo06g01000 1015 Pfam Leucine rich repeat 89 142 IPR001611 GO:0005515
Blo06g01000 1015 Pfam Leucine rich repeat 551 611 IPR001611 GO:0005515
Blo06g01000 1015 CDD STKc_IRAK 746 1014 - -
Blo06g01000 1015 ProSitePatterns Protein kinases ATP-binding region signature. 746 768 IPR017441 GO:0005524
Blo06g01000 1015 PANTHER RECEPTOR-LIKE PROTEIN 55 84 212 - -
Blo06g01000 1015 PANTHER OSJNBB0004A17.8 PROTEIN 177 1014 - -
Blo06g01000 1015 PANTHER OSJNBB0004A17.8 PROTEIN 10 102 - -
Blo06g01000 1015 Gene3D Ribonuclease Inhibitor 177 249 IPR032675 -
Blo06g01000 1015 SUPERFAMILY L domain-like 247 632 - -
Blo06g01000 1015 SUPERFAMILY Protein kinase-like (PK-like) 725 1011 IPR011009 -
Blo06g01000 1015 SMART LRR_typ_2 574 598 IPR003591 -
Blo06g01000 1015 SMART LRR_typ_2 105 129 IPR003591 -
Blo06g01000 1015 SMART LRR_typ_2 152 176 IPR003591 -
Blo06g01000 1015 SMART LRR_typ_2 550 573 IPR003591 -
Blo06g01000 1015 SMART LRR_typ_2 320 344 IPR003591 -
Blo06g01000 1015 SMART LRR_typ_2 249 272 IPR003591 -
Blo06g01000 1015 ProSiteProfiles Leucine-rich repeat profile. 576 599 IPR001611 GO:0005515
Blo06g01000 1015 PANTHER RECEPTOR-LIKE PROTEIN 55 177 1014 - -
Blo06g01000 1015 Gene3D Ribonuclease Inhibitor 341 649 IPR032675 -
Blo06g01000 1015 SUPERFAMILY RNI-like 87 334 - -
Blo06g01000 1015 Pfam Protein kinase domain 742 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g01000 1015 PRINTS Leucine-rich repeat signature 574 587 - -
Blo06g01000 1015 PRINTS Leucine-rich repeat signature 132 145 - -
Blo06g01000 1015 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Blo06g01000 1015 SMART serkin_6 740 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g01000 1015 PANTHER RECEPTOR-LIKE PROTEIN 55 10 102 - -
Blo06g01000 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Blo06g01000 1015 PANTHER OSJNBB0004A17.8 PROTEIN 84 212 - -
Blo06g01000 1015 Coils Coil 686 706 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01000 Blo-Chr6:33238522 Blo10g00752 Blo-Chr10:23685726 0 dispersed
Blo11g00747 Blo-Chr11:10086401 Blo06g01000 Blo-Chr6:33238522 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84352 PF00069 Pkinase 1.20E-43 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01000 - - jre:109006276 1360.51