Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01004 ATGCATGAATTTCATCCGGTTTGGTTTTTTTCCGGCCTCGGTTCAGTTTGGTCATCATCAGCTGCATCTGCAGTTCCTAGGAATTTCAGATTACTGGAAGAGCTTGAAAGAGGTGAAAAGGGAATTGGAGATGGAACAGTCAGCTATGGAATGGATGATGCTGATGATGTATACATGCAATCTTGGACAGGAACTATCATTGGTCCACCTAATACTGTTCATGAAGGTCGCATCTATCAGTTAAAGCTGTTCTGTGGAAAGGAGTATCCCGATAACCCACCGACTGTCAGATTCCAAACTCAGATAAACATGACCTGTGTCAGTCCAGAAACTGGAGTGGTTGAACCAAAATCATTCCCTATGCTTTCTAATTGGCAAAGGGACTGCACAATGGAGGACATATTGATTCAATTGAAGAAAGAGATGGCATCTCCCCAAAACCGAAAGCTAACTCAGCCTCTTGATGAATGTGATGAAAATGAAATGACTATTCTTCAGAAGCACATCGCATTCTTCGATAGAAATCACGACGGCGTCGTCTACCCATGGGAGACTTTTCAAGGATTTCGAGCGGTAGGATGTGGAATCCTGTTGTCTGTGGCTGGTGGCATTCTCGTAAATATGGCTCTCAGTCATAGTACTCGACCTGGAAAGTTTCCGTCTCTTCTATTCCCCGTTGTGATTAAAAATGCTCAAAAAGCCAAACACAAGAGCGATTCGGGTACATTCAATACCGAAGGAAGGTTTGATCCATCTAAATTCGAGGCGATTTTCACGAAAAATGCGAAAACTCACCCGAATGCATTGACATCGGACGAACTAAGTGGAATGTTGAAGGCAAATAGAGAACGCAAGGACCGAAATGGATGGATTATGAGCTACGCAGAATGGAAGCTTTTGTTTGAGCTTGGGAAAGACAAAGATGGGTTGCTGCAGAAAGAAACCCTCGAGGCTTTCTATGATGGAAGCTTATTTGAGAAATTGGAGAAAGAGAGGTTGTCTTCCAAAGAGAAACCCTAA 1020 43.14 MHEFHPVWFFSGLGSVWSSSAASAVPRNFRLLEELERGEKGIGDGTVSYGMDDADDVYMQSWTGTIIGPPNTVHEGRIYQLKLFCGKEYPDNPPTVRFQTQINMTCVSPETGVVEPKSFPMLSNWQRDCTMEDILIQLKKEMASPQNRKLTQPLDECDENEMTILQKHIAFFDRNHDGVVYPWETFQGFRAVGCGILLSVAGGILVNMALSHSTRPGKFPSLLFPVVIKNAQKAKHKSDSGTFNTEGRFDPSKFEAIFTKNAKTHPNALTSDELSGMLKANRERKDRNGWIMSYAEWKLLFELGKDKDGLLQKETLEAFYDGSLFEKLEKERLSSKEKP 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33269101 33275335 + BLOR17587 Blo06g01004 62297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01004 339 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 148 338 - -
Blo06g01004 339 SMART ubc_7 29 195 - -
Blo06g01004 339 Pfam Ubiquitin-conjugating enzyme 56 149 IPR000608 -
Blo06g01004 339 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 26 184 IPR000608 -
Blo06g01004 339 SUPERFAMILY EF-hand 163 319 IPR011992 -
Blo06g01004 339 Pfam Caleosin related protein 161 328 IPR007736 -
Blo06g01004 339 Gene3D Ubiquitin Conjugating Enzyme 12 158 IPR016135 -
Blo06g01004 339 PANTHER PEROXYGENASE 3-RELATED 148 338 IPR007736 -
Blo06g01004 339 SUPERFAMILY UBC-like 24 152 IPR016135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00301 Blo-Chr1:3719938 Blo06g01004 Blo-Chr6:33269101 3.04E-53 dispersed
Blo01g01234 Blo-Chr1:46706183 Blo06g01004 Blo-Chr6:33269101 2.00E-69 dispersed
Blo06g01004 Blo-Chr6:33269101 Blo12g00522 Blo-Chr12:23176283 4.47E-45 dispersed
Blo06g01004 Blo-Chr6:33269101 Blo07g01310 Blo-Chr7:33358912 4.04E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01004 K10704 - jre:108980955 249.98