Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01006 ATGGGTAACGTTAGCGTTGTCTTCTTATCCATTCCTAGTGCATTCTTCTTAGCCATTGCTCTATGTTTTGTTCATAGTGATGCTATGTCATGCAGCCAAACTCCTTACCCTAATGTCTGCAACTCATTCTTCAACAATGGCGTCTTGGAAAACCTCAAGATGAACCGTAATGGATTCCGTAGATCAGTTTTGGAGGTTACCATGGCTCAAGCTATGGAAGCTCACCGATTTGTTTCGGCCATGGACGTGAGATTGTTTGGTGATAACCGAGCCGAGCTGGCGTGGACTGACTGTTTGGAGCTCTACGAAGACACCGTCGATAAGCTCAACAAATCTATGAACTCCATTAGTGTTTTTGATCACCTAACATGGTTAAGTGCTTCAATCACTAATCATCAAACTTGTCAAAATGGGTTTAAGGAGTTCAACCTATCTTCGTATATTGATTCATTTCCTCCCATTTTAACCACCTTCTTTAAGCTCCTCAGCAATTCTCTTGCCTTAGCCAAGGCCTCTTCATTATCTTCTTCCTCCACAGCTTTTGCATTCACTCGACAAAGGGGTGGTAGGAGGTTGCTCTCCGACGGCTTTCCAGACTGGCTCTCGGCCGGTGATCGACGGCTTCTCCAATCCGCCGGCGAGAAAAAAGGTGATGTAATTGTTGCCCAAGATGGGTCAGGAAATTATAAATCCATTATGGAGGCTGTAAATTCAGCAGGAAAGAGGGGAGGATCAAGATTTGTTATTTACGTGAAATCCGGTGTTTATAAAGAAAATGTTGTGATCAAGAAGACGATAAGGAACATTATGATCATTGGAGATGGGATTGGTTCCACCATTGTTACCGCCAACAGCAATGCTGAAGATGGGTCTACCACTTTTCGTTCTGCCACAATTGGGATCTCAGGAGATGGATTCATAGCACAAGACATAACCTTTGAGAACACCGCCGGACCCCAAAAACACCAGGCGGTAGCAGTCCGGTCAAGCTCCGACCACTCCGTCTTCTACCGGTGCAGCATAAAGGGCTACCAAGACACCCTCTACGTGTACTCGCAGCGACAATTCTACCGAGACTGCGACATTTATGGGACCGTCGACTTCATCTTTGGAAACGCCGTCGCCGTCATCCAAAACTGCAACATCTACGCAAGAAAACCGATGGGATACCAACAAAATACGGTGACAGCTCAAGGGAGAACCGACCCAAATGAGAACACCGGAATCATAATCCATAGCTCACGTATAACCGCTTCGTCGGACCTCCGACCGTCGCAAAATTCTTTCAGAACTTTTCTTGGCCGGCCATGGCAAAAATACTCGAGGACTGTAATTATGAAAACGGCACTCGACGGTTTGATCGACCCGGCGGGGTGGGCACCGTGGACTGGGAGTTTCGCATTGAGTACTCTTTACTATGGTGAGTACCTGAACACAGGCAGCGGGGCTAATACCGACCGGAGAGTAAAATGGGGAGGGTTTCGGGTGATAACGAGTCCGCTGGAGGCCGGAAAGTTTACAGTAGGGAAATTTCTGGCTGGTGGGTCGTGGATTCCGGCGACCGGAGTTCCGTTCGATGCAGATTTATGA 1590 47.42 MGNVSVVFLSIPSAFFLAIALCFVHSDAMSCSQTPYPNVCNSFFNNGVLENLKMNRNGFRRSVLEVTMAQAMEAHRFVSAMDVRLFGDNRAELAWTDCLELYEDTVDKLNKSMNSISVFDHLTWLSASITNHQTCQNGFKEFNLSSYIDSFPPILTTFFKLLSNSLALAKASSLSSSSTAFAFTRQRGGRRLLSDGFPDWLSAGDRRLLQSAGEKKGDVIVAQDGSGNYKSIMEAVNSAGKRGGSRFVIYVKSGVYKENVVIKKTIRNIMIIGDGIGSTIVTANSNAEDGSTTFRSATIGISGDGFIAQDITFENTAGPQKHQAVAVRSSSDHSVFYRCSIKGYQDTLYVYSQRQFYRDCDIYGTVDFIFGNAVAVIQNCNIYARKPMGYQQNTVTAQGRTDPNENTGIIIHSSRITASSDLRPSQNSFRTFLGRPWQKYSRTVIMKTALDGLIDPAGWAPWTGSFALSTLYYGEYLNTGSGANTDRRVKWGGFRVITSPLEAGKFTVGKFLAGGSWIPATGVPFDADL 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33299721 33301766 + BLOR17589 Blo06g01006 62299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01006 529 Gene3D - 213 529 IPR012334 -
Blo06g01006 529 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 22 528 - -
Blo06g01006 529 Pfam Plant invertase/pectin methylesterase inhibitor 30 168 IPR006501 GO:0004857
Blo06g01006 529 ProSitePatterns Pectinesterase signature 1. 243 262 IPR018040 -
Blo06g01006 529 Pfam Pectinesterase 218 514 IPR000070 GO:0030599|GO:0042545
Blo06g01006 529 PANTHER PECTINESTERASE 22 528 - -
Blo06g01006 529 ProSitePatterns Pectinesterase signature 2. 362 371 IPR033131 -
Blo06g01006 529 SUPERFAMILY Pectin lyase-like 217 527 IPR011050 -
Blo06g01006 529 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 170 IPR035513 -
Blo06g01006 529 CDD PMEI-like_3 30 149 - -
Blo06g01006 529 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 171 IPR035513 -
Blo06g01006 529 SMART PMEI_2 24 168 IPR006501 GO:0004857
Blo06g01006 529 TIGRFAM PME_inhib: pectinesterase inhibitor domain 30 170 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01006 Blo-Chr6:33299721 Blo16g00613 Blo-Chr16:24726464 0 dispersed
Blo06g01006 Blo-Chr6:33299721 Blo06g01091 Blo-Chr6:34203091 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01006 - - zju:107429290 669.463