Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01009 ATGACTCGGGTGGTGAAGAAAAACTGCAATCCCGTTTGGAACGAGGATTTCACTCTTTCCATTTCAAATCTCAGCACTCCAATAACCCTAACAGTGTATGACAAAGACAAGTTCACAGAAGATGATAAAATGGGTGAGGCAGAGATTGACATCAAACCCTACATAGAATGTCTTAAAATGGGTTTGAAGAATCTACCAAATGGCTGCGCCGTTAAGAGAATTCAGCCGGACCGCACGAACTGCCTCTCCGACGAGAGCTCGTGTGTTTGGAACGACGGAAAAATTGTTCAAGACATGCCTCTCAGGTTGAGGAATGTGGAGAGTGGGGAAGTTATGATTCAGATTGAGTTGATCGTTGGTCCTGAATCCAAACGTTATTTGGCGGCCATTAAAGACTAG 399 44.36 MTRVVKKNCNPVWNEDFTLSISNLSTPITLTVYDKDKFTEDDKMGEAEIDIKPYIECLKMGLKNLPNGCAVKRIQPDRTNCLSDESSCVWNDGKIVQDMPLRLRNVESGEVMIQIELIVGPESKRYLAAIKD 132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33326549 33327018 - BLOR17592 Blo06g01009 62302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01009 132 Pfam C2 domain 2 53 IPR000008 -
Blo06g01009 132 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 122 IPR044562 -
Blo06g01009 132 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 2 122 - -
Blo06g01009 132 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 52 IPR035892 -
Blo06g01009 132 Gene3D C2 domain 1 127 IPR035892 -
Blo06g01009 132 ProSiteProfiles C2 domain profile. 1 67 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01009 Blo-Chr6:33326549 Blo16g00116 Blo-Chr16:2719330 1.89E-48 dispersed
Blo11g00975 Blo-Chr11:23205757 Blo06g01009 Blo-Chr6:33326549 1.72E-70 transposed
Blo15g00058 Blo-Chr15:456595 Blo06g01009 Blo-Chr6:33326549 2.49E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01009 - - zju:107429323 196.052