Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01027 ATGGAGTCCAATGTAAGTAACGTTTGCTTGGAAATAGCAATGGAGGTTCATCAGGTTTTGCCGCCTCCCCATAAAACGGCCATGCAAAAGCTGAAGAACAAGCTGAAAGAGACCTTCTTCTCCGACGACCCTCTCCGTCAGTTTAAAGGACAGCCTGCGAAAAGGAAATGGATTCTTGCAGCCCAATATTTCTTCCCTATTCTTCAATGGGGTCCTACCTACACTCTCAAGCTTTTCAAATCCGACATTGTTTCTGGCCTTACAATTGCTAGTTTAGCCATTCCTCAGGGCATCAGTTATGCCAAGCTAGCAAATCTTCCTCCAATCGTGGGTCTCTATTCAAGCTTTGTTCCTCCTCTGGTATATGCTGTTCTTGGTAGCTCGAGGGATCTGGCAGTGGGGCCAGTTTCAATTGCTTCGCTCATACTTGGATCAATGTTGAGGCAACAAGTTTCTCCAACTAAAGACCCTCATCTCTTTCTTCAGCTTGCTCTTACTTCCACTCTCTTTGCTGGCCTCTTCCAAGCTTCTTTGGGTTTTTTAAGGCTTGGATTCATAATTGATTTTCTGTCAAAGGCGACACTGATTGGGTTCATGGGCGGAGCCGCCATTATTGTGTCTCTGCAACAGCTGAAAAGCCTGCTGGGCATCCAGCATTTCACCAACCAAATGGGTTTAATCCCTGTCTTGACCTCCGTTTTTCATCATACCAATGAGGCATTGATAATTGTTGTGTTTTTATGGGGATGTGTGCAGTGGTCATGGGAGACTGTACTGATGGGAGTCTGCTTCCTCGTTTTACTGCTTCTGACCAGACACATTAGCATGAAAAGGCCGAAGCTGTTCTGGGTGTCAGCCGGAGCCCCTCTTGTCTCTGTCATTCTCTCCACCTTCCTCGTTTTCGCTTTCAAAGCTAACCGCCATGGGATCAGCATTATCGGAAAATTGCAAGAAGGACTCAATCCTCCGTCATTGAATATGCTGAAATTTAAAGGCGCGTATTTAGGACTTGTATTGAAGACTGGCCTCGTCACTGGCATCATTTCTCTCACTGAAGGCATTGCAGTTGGGCGAACTTTTGCTGCTCTAAAGGACTATCGAGTTGATGGAAACAAAGAGATGATAGCTATTGGCCTAATGAACGTGGTCGGCTCATTTACTTCTTGTTATGTAACAACAGGTGCATTTTCAAGGTCGGCTGTGAATCACAATGCCGGAGCCAAAACTGCAGTGTCTAACATTGTAATGTCTGTTACGGTTATGGTGACGCTTCTCTTCCTAATGCCCCTATTTCAATATACGCCAAATCTTGTATTGGCTGCAATTATTGTTACTGCTGTGGTTGGCCTCATTGATTTACCTGCTGCTTATAGCATTTGGAAGATTGACAAATTCGATTTTGTTGTAATGTTATGTGCATTCTTTGGAGTTCTTTTGATCTCTGTCCAAAATGGCCTGGCTATTGCTGTTGGTTTGTCCACTTTGAAGATCATCCTGCAAATAACCAGGCCAAAAACAGTGATACTGGGTAACATTCCTGGGACAGATATATATCGCAATATTCACCATTACAAGGAAGCCATGAGAGTTCCTGGCTTTCTTATTTTATGCATTGAAGCTCCAATCAACTTTGCTAACACCACATATCTCAATGAAAGGATATTGAGATGGATAGAAGAATATGAAACAGAAGATGATGACATTAAAAAGGCACCAAGCCTTCACTTTCTCATACTAGAAATGTCAGCTGTGAGTGCTATAGACACAAGTGGAGTCACACTTTTCAAAGACATGAGGAGATCTATGGAAAAGAAGGGCAGTTGTATGCCTCTCATTGATTCTCTACTGTCTCACATTGCTTGCTACTCTTCAGCAGCTGAAATTTGGAGTGCTCTAGCTCGACTCTATTCTTCCACATCTCTTGCTCACCTAACAGAGTCACGTGGACAGCTGCACAAGTTATCCAAAGATGGCCTTATGGCCTCCGAATATATCCAGAAAGTAAGTTCAATTTGCAACACTCTTCAAGCAATTGGAGAACCAAACTCACACAAGGATCAAATTCTGTACCTGCTGAGTGGTCTAGGTAGTGACTACAATCCGTTTGTCACCTCCATCACGAATCGTCCAGACACTCTAACGATTGAAGACGTACATAGCCTTCTCCTCAGCTATGACTCACGTCTGGACAAGCAACACTCCGCGGCATCTCTTCATTCTCTTCAGGCTAATTTCTCCTCTCTTACTATCGGCCGATAG 2259 43.91 MESNVSNVCLEIAMEVHQVLPPPHKTAMQKLKNKLKETFFSDDPLRQFKGQPAKRKWILAAQYFFPILQWGPTYTLKLFKSDIVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQQVSPTKDPHLFLQLALTSTLFAGLFQASLGFLRLGFIIDFLSKATLIGFMGGAAIIVSLQQLKSLLGIQHFTNQMGLIPVLTSVFHHTNEALIIVVFLWGCVQWSWETVLMGVCFLVLLLLTRHISMKRPKLFWVSAGAPLVSVILSTFLVFAFKANRHGISIIGKLQEGLNPPSLNMLKFKGAYLGLVLKTGLVTGIISLTEGIAVGRTFAALKDYRVDGNKEMIAIGLMNVVGSFTSCYVTTGAFSRSAVNHNAGAKTAVSNIVMSVTVMVTLLFLMPLFQYTPNLVLAAIIVTAVVGLIDLPAAYSIWKIDKFDFVVMLCAFFGVLLISVQNGLAIAVGLSTLKIILQITRPKTVILGNIPGTDIYRNIHHYKEAMRVPGFLILCIEAPINFANTTYLNERILRWIEEYETEDDDIKKAPSLHFLILEMSAVSAIDTSGVTLFKDMRRSMEKKGSCMPLIDSLLSHIACYSSAAEIWSALARLYSSTSLAHLTESRGQLHKLSKDGLMASEYIQKVSSICNTLQAIGEPNSHKDQILYLLSGLGSDYNPFVTSITNRPDTLTIEDVHSLLLSYDSRLDKQHSAASLHSLQANFSSLTIGR 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33593095 33599717 - BLOR17610 Blo06g01027 62320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01027 752 PANTHER BNAA09G30120D PROTEIN 15 613 IPR030313 -
Blo06g01027 752 PANTHER SULFATE TRANSPORTER 15 613 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo06g01027 752 Gene3D STAS domain 503 628 IPR036513 -
Blo06g01027 752 ProSiteProfiles STAS domain profile. 523 606 IPR002645 -
Blo06g01027 752 Pfam Sulfate permease family 79 472 IPR011547 GO:0016021
Blo06g01027 752 TIGRFAM sulP: sulfate permease 66 607 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo06g01027 752 CDD STAS_SulP_like_sulfate_transporter 524 606 - -
Blo06g01027 752 ProSitePatterns SLC26A transporters signature. 108 129 IPR018045 GO:0008271|GO:0008272
Blo06g01027 752 SUPERFAMILY SpoIIaa-like 528 610 IPR036513 -
Blo06g01027 752 Pfam gag-polypeptide of LTR copia-type 612 731 - -
Blo06g01027 752 Pfam STAS domain 524 606 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00103 Blo-Chr5:946868 Blo06g01027 Blo-Chr6:33593095 0 dispersed
Blo06g01027 Blo-Chr6:33593095 Blo10g00016 Blo-Chr10:175019 0 dispersed
Blo12g00361 Blo-Chr12:19777744 Blo06g01027 Blo-Chr6:33593095 4.17E-36 dispersed
Blo13g00644 Blo-Chr13:29061630 Blo06g01027 Blo-Chr6:33593095 8.50E-45 dispersed
Blo13g00734 Blo-Chr13:30169843 Blo06g01027 Blo-Chr6:33593095 3.56E-33 dispersed
Blo06g01027 Blo-Chr6:33593095 Blo06g00679 Blo-Chr6:29955944 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01027 K17471 - tcc:18609783 952.97