Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01029 ATGGCTCTAAGCTCCGCCATTGCCTCCTTCAAGTCTTCGAAGTTCATCTCTTGGAAACCAGTACGTTTTCTCTCAACTCCATCTACTCTCTGCAATCTTATCCTCATTTTCATTCTTTCCTTTTCGATTTTTCAGACAGGTTTGCTTCAGCAAACTCTGGCAGGAGTCATAGAGAGGAGCGGGACCGGTCTTCACTCTGGTGAAGTTTCGACTGTCAAACTGTGGCCGGAGTCTGCCGGAAAAGGCAGATTCTTTTGTTTTAAATTCAATCAGGTCCAGGCAGCCATTGATAATGTTGAAGAATCTCCTCTTTGTACCACGCTTACCAAAAATGGGTTTAGGATTCGAACGGTTGAGCATTTGCTTTCGGCTCTGGAGGCTACCGGTGTTGATAATTGCAGGATCGAGATTATCAACTCCGATGCGAGTGACTGTGATGTTGAGGTTCCTATTTTTGATGGGTCAGCCGGTGAATGGGTGGATGCAATAAATCATGTTGGGCTTGAAGTGGCTACAGATCTATCAAGCAGCAGCTGTGAAAAAATGGCACCATATGTAAATGAACCAGTATATGTGTGGAGGAATGATTCTTTTCTGGCTGCTTTCCCTGATGCAGAATTACGCATCACATGTGGAATCGACTTTCCACAGGTACCTCAAATAAGTTGTCAATGGTATTCTACAACCACGTTGGACCGCTTGTTCTATGCTGAACAGATTGCATCAGCAAGAACATTTTGCATTTATGAGGAGGTTGAGCGCATGCGCAATAGGGGACTAATAAGAGGAGGCACACTTGAAAATGCTATAGTTTGTAGTTCCTCTAGAGGTTGGCTAAACCCACCGTTGCGATTCCATGACGAACCATGCCGGCACAAGCTCTTAGATCTCATTGGTGATCTTTCCCTTTTTGCTCAGTCAGGTAGTCAAGGTCTTCCGGTAGCACACATTGTAGCCTACAAGGCAAGTATTTACTCTTCTGTTCCTTGTCTTGTTTTTGCAATTAATTGA 1011 44.31 MALSSAIASFKSSKFISWKPVRFLSTPSTLCNLILIFILSFSIFQTGLLQQTLAGVIERSGTGLHSGEVSTVKLWPESAGKGRFFCFKFNQVQAAIDNVEESPLCTTLTKNGFRIRTVEHLLSALEATGVDNCRIEIINSDASDCDVEVPIFDGSAGEWVDAINHVGLEVATDLSSSSCEKMAPYVNEPVYVWRNDSFLAAFPDAELRITCGIDFPQVPQISCQWYSTTTLDRLFYAEQIASARTFCIYEEVERMRNRGLIRGGTLENAIVCSSSRGWLNPPLRFHDEPCRHKLLDLIGDLSLFAQSGSQGLPVAHIVAYKASIYSSVPCLVFAIN 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33619104 33622226 + BLOR17612 Blo06g01029 62322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01029 336 Gene3D lpxc deacetylase, domain 2 185 331 IPR011334 GO:0008759|GO:0009245
Blo06g01029 336 Gene3D lpxc deacetylase, domain 1 48 174 IPR015870 GO:0008759|GO:0009245
Blo06g01029 336 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 324 IPR004463 GO:0008759|GO:0009245
Blo06g01029 336 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 50 323 IPR004463 GO:0008759|GO:0009245
Blo06g01029 336 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 49 323 IPR004463 GO:0008759|GO:0009245
Blo06g01029 336 SUPERFAMILY Ribosomal protein S5 domain 2-like 188 323 IPR020568 -
Blo06g01029 336 SUPERFAMILY Ribosomal protein S5 domain 2-like 49 169 IPR020568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01029 K02535 - qsu:111989198 436.417