Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01030 ATGGAAGCCTCGCCGACGTCCACGACGGCGCCGGAACCGCATGCCCCGCTTTTACGGCCTCGCCAGCCCTCCACCTCTGAAGGTACCAGCTCCCCTGCCCAACCATCCACTCTCGCTTTTCTACTTGGTCGAGCCACCGGTCATCGCGGTCCCTCCATGTTGGTCCGGGAGACTGCGGCTCGGCAGCTCGAGGAGCGGCGGGCCGACTGGGGCTATTCCAAACCCGTGGTGGTGCTCGATATGATGTGGAACACGGCTTTTGTTGTTGTCACTGTGGTTATGTTGATTTGCACAACCCACGAGCACGCTGACACGCCGCTTCGGCTATGGATCTGTGGGTACGCTTTGCAGTGCGTGGTTCACGTTGTCCTGGTGTGGTTGGAGTATAGGAGGAGGACTGTGAGGCGAGTTAGGGATTTGGAGAGGGAGCAGCAGGGAGGAGATGTTACGAACGAAAGCGAGGATGAGGATTCCGGAGAGAGGGGTTTGACTAGTTTGAACCGGTCTAGTGTCAACAAGCGATGTGAATCAGTAAACACGATGGCGTCATTTCTCTGGTGGATAGTTGGCTTCTATTGGGTTGTCTCTGGTGGTGATGATCTTTTGCGAAAAGCTCCTCATTTGTATTGGTTGGCTGTAGTCTTTCTGGCATTTGATGTGTTTTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGGGTTGCTCTTTGTTGCTGCTTGCCTTGCATCATTGCCATTCTCTACGCTGTTGCAGGACAGGAAGGTGCATCAGAAGCAGATCTTAGTATCCTTCCAAAATACAGATTTCAAGCGTTTAATGAAGAAGAGAAGGCCAATGTGGGGGTTGGTTTGATGATTCCTGTAACATCAAGCAGTGGATACTTAGCGACCGAGAAAACACTCTTGTCAGAGGATGCAGAGTGTTGTATATGTTTGAGTTCATACGAGGATGGAGCAGAGCTGAATGCTCTTCCCTGTAGCCACCATTTCCACTCTACGTGCATCACAAAATGGCTGAAGATGAATGCTACCTGTCCTCTTTGCAAATACAACATTCTCAAAGGCTGCGAGCAGGTATAA 1083 50.88 MEASPTSTTAPEPHAPLLRPRQPSTSEGTSSPAQPSTLAFLLGRATGHRGPSMLVRETAARQLEERRADWGYSKPVVVLDMMWNTAFVVVTVVMLICTTHEHADTPLRLWICGYALQCVVHVVLVWLEYRRRTVRRVRDLEREQQGGDVTNESEDEDSGERGLTSLNRSSVNKRCESVNTMASFLWWIVGFYWVVSGGDDLLRKAPHLYWLAVVFLAFDVFFAIFCVVLACLIGVALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQAFNEEEKANVGVGLMIPVTSSSGYLATEKTLLSEDAECCICLSSYEDGAELNALPCSHHFHSTCITKWLKMNATCPLCKYNILKGCEQV 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33623785 33627229 - BLOR17613 Blo06g01030 62323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01030 360 MobiDBLite consensus disorder prediction 1 35 - -
Blo06g01030 360 MobiDBLite consensus disorder prediction 145 164 - -
Blo06g01030 360 SUPERFAMILY RING/U-box 296 354 - -
Blo06g01030 360 SMART ring_2 309 349 IPR001841 -
Blo06g01030 360 Pfam Ring finger domain 308 350 IPR001841 -
Blo06g01030 360 ProSiteProfiles Zinc finger RING-type profile. 309 350 IPR001841 -
Blo06g01030 360 PANTHER TARGET OF ERK KINASE MPK-1 12 357 - -
Blo06g01030 360 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 12 357 - -
Blo06g01030 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 356 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01099 Blo-Chr2:41935822 Blo06g01030 Blo-Chr6:33623785 1.42E-109 dispersed
Blo06g01030 Blo-Chr6:33623785 Blo11g00077 Blo-Chr11:585960 3.84E-73 dispersed
Blo06g01030 Blo-Chr6:33623785 Blo03g00199 Blo-Chr3:4665945 1.19E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01030 - - tcc:18609876 543.888