Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01031 ATGGCGGACATTCCTGGCGACGGAGGAGAACTCAGCTATGGTAGGACGGAGCCACTAACGGTGGCGACGCCGAATCCGCCGCCGTTGACCGTGTCAGGATCGTTCAAGGATGGGAGGAGTTCCTCGAGGAGGAGAACTTCAGTGAGGCCGAGTTTGGACGCTGACGAGTTCTTGAACTTGTTGCACGGCTCGGATCCGGTCAAGCTCGAGCTCAACAGGCTCGAGAATGAGGTTCGAGATAAGGACCGAGAGTTGGGAGAAGCTCAGGCGGAAATCAAGGCCTTGAGGTTTTCGGAGCGGCTAAGAGAAAAGGCAGTCGAAGAGCTCACAGAAGAATTATCAAAAGTGGACGAGAAGCTGAAATTAACAGAATCTCTTCTTGAAAGCAAGAATCTTGAAATAAAGAAAATCAATGATGAGAAGAAGGCATCCATGGCAGCTCAATTTGCTGCTGAAGCGACTCTTAGAAGAGTTCATGCTGCTCAGAAAGATGACGATATGCCTCCTATTGAAGCTATTCTTGCACCTTTGGAGGCTGAGCTCAAGCTTGCCCGACAAGAGATTGCTAAGCTTCAAGATGACAATAAAGCATTGGATCGTCTTACGAAATCAAAGGAAGCAGCTTTACTTGAAGCTGAGAGGACTGTCCAGGTTGCTTTAGCTAAAGCCTCTATGGTGGATGACCTCCAGAATAAGAACCAAGAATTAATGAAGCAAATTGAAATTTGTCAGGAGGAAAACAAAATTTTGGACAAGATGCACAGACTCAAAGTCGCGGAGGTTGAAAAGTTAACCCAGACTGTTCGGGAGTTAGAGGAGGCAGTTCTTGCTGGTGGTGCAGCAGCAAATGCAGTGCGAGATTATCAGCGGAAAGTTCAGGAGATGAATGAGGAAAGGAAAACTCTTGACCGGGAGTTGGCCCGTGCAAAAGTAACAGCAAACAGAGTGGCTACGGTAGTGGCTAATGAATGGAAAGATGCCAACGACAAAGTTATGCCAGTAAAACAGTGGCTTGAAGAACGGAGGTTTTTACAGGCATGCTTCAATCTTCCTTCTTTTCTTTGGCTATTGATGCGTTGGAGAAGGCACATCTCTATCATGAAAGATTTAGGGGAAATGCAACAGCTTCGTGACAAGCTTGCCATAACTGAGAGAACTGCAAAGTCTGAAGCACAACTGAAAGAAAAATATCAATTGCGGCTTAAAGTATTGGAGGAGAGTTTAAGGGGGTCCTCTAGTAGTAATAATTGCAGTACACCAGAAGGAAGAAGTTTAAGCAATGGCCCTTCTCGGCGCCAATCACTGGGCGGTGCAGATAATATCTCAAAATTAACCTCCAATGGGTTTCTATCCAAGAGAACTCCTACTTCCCAATTGAGATCTTTGTCCTCTAGCATGGTCTTGAAACATGCAAAGGGCACGTCAAAATCATTTGACGGAGGTACAAGGTCATTGGACCGTGGAAAAATCCTTTTAAATGGAAGCAACCTTACTTACAGTTTCAATCAGCCTGCTGATGGAGCAAAGGCAGGCAATGCACAGAGTGAATGGAAAGGAAATCCTGAAGAGAAGAGAAATGATTTTTCAACTGGTGATTGTGAAGAAAGTGTCCCGGTGGTTTTGTATGATTTTCTGCAAAAAGAGGTTGTAGCTTTGAGAAAATCTGGTCATGAGAAAGATCAAAGCTTGAAAGATAAGGATGACGCTATCGAGATGTTGGCAAAAAAGGTAGAGACACTGACTAAAGCAATGGAGGTTGAAGCAAAGAAGATGAGAAGAGAAGTAGCTGCCATGGAGAAGGAAGTAGCTGCCATGCGAGTGGAGAAAGAACATCAGAATAGGGCCAAGCGATTTAGCAATGTCAAGGGTCCAGTTAATTCAGTTACAGCTCAGCTGCTTTCTGGAAGTCATTTGGATCATGTTGGCGCCCTTCCTTACTTCACTGAAGTTTGCGGTTATACCGGACCAATTTACATGACGTATCCAACAAAGGCTTTGGCGCCTTTAATGTTAGAAGATTATAGGAAAGTGATGGTTGAGCGAAGAGGTGAAGAGGAGCAATTTACCTCTGATCATATTATGGAATGCATGAGGAAGGTTATACCCGTGGATCTGAAGCAGACTGTGCAGGTTGACAAAGACCTGCAAATTCGGGCATACTATGCTGGACATGTTCTGGGTGCTGCTATGTTTTATGCAAAAGTAGGTGACAGCGCTATGGTGTACACAGGAGATTATAATATGACACCAGATAGGCATCTTGGAGCAGCTCAAATTGATCGATTACAACTGGACCTTCTTATAACAGAATCCACTTATGCAACGACCACCCGTGATTCAAAATATGGCCGAGAGAGGGAATTTCTTAAAGCTGTTCATAATTGTGTTGCGGGTGGAGGGAAAGTACTAATTCCTACATTTGCTCTTGGACGAGCCCAGCAGGAACTTTGTATCTTGTTGGATGATTATTGGCAGCGCATGAATCTAAACGTGCCTATTTATTTCTCAGCAGGTTTGACTATTCAAGCTAATATGTATTACAAGATGCTAATCAGTTGGACCAGCCAGAGGATCAAAGAGACATACACCACACATAATGCATTTGATTTTAAAAATGTCCGTAATTTCGATCGCTCGATGATGGATGCTCCTGGACCATGTGTTCTTTTTGCTACACCTGGGATGATCAGTGGTGGTTTTTCACTCGAGGCCTTTAAGAAGTGGGCTCCTTCTGAAATGAATCTCATCACATTGCCAGGGTACTGTGTTGCTGGAACCATTGGGCATAAATTGATGTCAGGTAAACCCACCAAAATTGATCTGGATAAGGACTCTCACATCGACGTTCGATGCCAGATTCATCAGTTGTCTTTCAGTCCACATACTGATGCAAAAGGGATCATGGATCTTGTCAAGTTTTTGAGCCCCAAGCACGTGGTTCTAGTACACGGCGAGAAACCGAAGATGGCTATTCTGAAAGGGAGAATCCATTCTGAATTGGGAATCCCATGTTATGACCCTGCAAATAATGAGACAGTCTCCATCCCTTCAACTCATTATATCAAAGCAGACACATCCAATCTTTTTCTTCGCAGTTGCTTGAATCCAAACTTCAAGTTCTCAAAATGTGAGTCCTATGACGAGTCCGATACGATGAAAAAAGACAAAAAGTTTCTTCCGAGGCTTGAGTTGAGTGATGAAAGGGTAGGTGAAGGAATCTTGGTTATGGAGCAAAGCAAAGAAATGAAAATATTACACCAAAATGAGCTGCTTCATCTGTTAGCGGAGAAAAGGCATGAGGTTGAGTTTGCTTATTGTTTTCCCGTGGCTTCATGCAATTTATCGAACAGACCTGGATGGCTTCGGATTTTGTCGGCCAAATTATCAAATGAACTTTCTGAAGGCAATGTCCAGGATTTTGAAGATCGTCTTCAAATTGAATCGATTCGGTTGTCAATTTGTTCGAAAGATAAGTGTCTTTACAGAAGCGATAACAAAATCGAGGATAAATCAACGAAAATGTTTTGTTGTTGCAGCTGGTCAGTGGGGGACGAGAAGCTTGCTTCGAAAATCATCGCAATTGCAGAGAAGTTTCAAGTAGAGAGCCTTGAGCTGCCTACCACCTCCTGCAATGGCTAA 3639 43.78 MADIPGDGGELSYGRTEPLTVATPNPPPLTVSGSFKDGRSSSRRRTSVRPSLDADEFLNLLHGSDPVKLELNRLENEVRDKDRELGEAQAEIKALRFSERLREKAVEELTEELSKVDEKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRLKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVATVVANEWKDANDKVMPVKQWLEERRFLQACFNLPSFLWLLMRWRRHISIMKDLGEMQQLRDKLAITERTAKSEAQLKEKYQLRLKVLEESLRGSSSSNNCSTPEGRSLSNGPSRRQSLGGADNISKLTSNGFLSKRTPTSQLRSLSSSMVLKHAKGTSKSFDGGTRSLDRGKILLNGSNLTYSFNQPADGAKAGNAQSEWKGNPEEKRNDFSTGDCEESVPVVLYDFLQKEVVALRKSGHEKDQSLKDKDDAIEMLAKKVETLTKAMEVEAKKMRREVAAMEKEVAAMRVEKEHQNRAKRFSNVKGPVNSVTAQLLSGSHLDHVGALPYFTEVCGYTGPIYMTYPTKALAPLMLEDYRKVMVERRGEEEQFTSDHIMECMRKVIPVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTTRDSKYGREREFLKAVHNCVAGGGKVLIPTFALGRAQQELCILLDDYWQRMNLNVPIYFSAGLTIQANMYYKMLISWTSQRIKETYTTHNAFDFKNVRNFDRSMMDAPGPCVLFATPGMISGGFSLEAFKKWAPSEMNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDSHIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVVLVHGEKPKMAILKGRIHSELGIPCYDPANNETVSIPSTHYIKADTSNLFLRSCLNPNFKFSKCESYDESDTMKKDKKFLPRLELSDERVGEGILVMEQSKEMKILHQNELLHLLAEKRHEVEFAYCFPVASCNLSNRPGWLRILSAKLSNELSEGNVQDFEDRLQIESIRLSICSKDKCLYRSDNKIEDKSTKMFCCCSWSVGDEKLASKIIAIAEKFQVESLELPTTSCNG 1212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33628442 33642696 - BLOR17614 Blo06g01031 62324

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01031 1212 Coils Coil 574 615 - -
Blo06g01031 1212 SMART Beta_Casp_2 813 931 IPR022712 -
Blo06g01031 1212 Pfam Metallo-beta-lactamase superfamily domain 615 759 IPR001279 -
Blo06g01031 1212 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 18 346 - -
Blo06g01031 1212 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 371 640 - -
Blo06g01031 1212 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 371 640 IPR009768 GO:0007010|GO:0008017
Blo06g01031 1212 Coils Coil 174 201 - -
Blo06g01031 1212 Gene3D - 780 959 - -
Blo06g01031 1212 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 18 346 IPR009768 GO:0007010|GO:0008017
Blo06g01031 1212 Coils Coil 285 312 - -
Blo06g01031 1212 Pfam Beta-Casp domain 814 931 IPR022712 -
Blo06g01031 1212 MobiDBLite consensus disorder prediction 1 50 - -
Blo06g01031 1212 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 947 1005 IPR011108 -
Blo06g01031 1212 SUPERFAMILY Metallo-hydrolase/oxidoreductase 626 1016 IPR036866 -
Blo06g01031 1212 Coils Coil 106 140 - -
Blo06g01031 1212 Coils Coil 71 91 - -
Blo06g01031 1212 SMART Lactamase_B_5a 580 800 IPR001279 -
Blo06g01031 1212 MobiDBLite consensus disorder prediction 503 531 - -
Blo06g01031 1212 MobiDBLite consensus disorder prediction 410 465 - -
Blo06g01031 1212 Gene3D - 610 996 IPR036866 -
Blo06g01031 1212 Coils Coil 226 274 - -
Blo06g01031 1212 Pfam Microtubule-associated protein 70 371 628 IPR009768 GO:0007010|GO:0008017
Blo06g01031 1212 Pfam Microtubule-associated protein 70 55 346 IPR009768 GO:0007010|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01031 - - K13148 csv:101212718 914.835
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01031 Blo-Chr6:33628442 Blo12g00561 Blo-Chr12:23758365 5.07E-07 dispersed
Blo06g01031 Blo-Chr6:33628442 Blo14g00038 Blo-Chr14:247646 1.16E-122 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g500 . . . . . Bpe10g01001 Bma14g01927 Bma15g00026 Cmo04g01102 . Cma04g01029 Cma04g00077 Car04g00961 Car04g00073 Sed04g3001 . . Bhi07g00400 Tan04g1510 Cmetu10g0919 Lac13g1329 Hepe01g0590 . . Cla07g00538 Cam07g0579 Cec07g0638 Cco07g0604 Clacu07g0582 Cmu07g0618 Cre07g0954 . Cone19ag0733 Cone6ag0360 Cone9ag0390 Lsi04g01101 . . . Blo06g01031 . Bda07g01745 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g01255 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003480 1 12 1 1 1 1 1 1 1 1 3 1 1 0 1 1 1 2 1 1 1 1 1 3 1 2 1 2 1 1 47
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g01031 Blo_Chr06 FPKM 0.576405 0.293125 1.068748 1.261187 0.548007 0.381327 0.496483 1.48013 1.193488 1.688521