Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01053 ATGAGTGTTTCTCCCATGGGATTTGGAACCTGGGCGTGGGGGAACCAGCTTTTGTGGGGATATCAGAAATCCATGGATGCTGAACTTCAAAAAACTTTCAATCTGGCCGTGGAGAACGGCATTAATCTTTTTGACACTGCTGATTCTTATGGTACTGCTACCTTAAATGGCCGAAGTGAAAAGCTACTTGGGAGGTTCCTGAGAGAATTTGGAGATGAAAAACCTCTCAAGAATGACATTGTGATTGCTACTAAGTTTGCAGCATACCCTTGGCGCCTAACTCCAGCGCAGTTTGTGAATGCTTGCAAGGCTTCTTTGGACCGGTTGCAGATTGATCAAATTGGGATAGGCCAGCTGCATTGGTCCACTGCAAACTATGCGCCTCCTCAGGAGGCAGCTCTTTGGGATGGCTTAGTGGCGATGTATGACAAGGGGTTGGTTCGAGCAGTGGGGGTGAGTAACTATGGACCAAGGCAACTTCTTAAAATATATGATTATCTACAAGCCCGAGGAGTCCCCTTGTGCTCTGCTCAGGTGCAGTTTTCTTTGCTGAGCATGGGGGAAGATCAGTTGGAGATCAAGAATGTATGCGATTCTCTAGGTATCCGCCTGATTGCCTATAGCCCTTTAGGGCTTGGAATGCTTACCGGAAAGTATTCCCCCACCAAACTGCCACCGGGGCCTCGGGGTTTTTTGTTCAGGAAAACTCTTCCAGGACTGGAACCTTTGCTTAGATCACTCAAAGAAATCGCAGGACAAAGGAGGAAAACTATACCTCAAGTAGTTGCAATAAACTGGTGTATCAGCAAAGGCTCGATTCCAATACCTGGAGTGAAGACAGTTGAACAAGCGAAAGAGAATTTAGGCGCTCTCGGTTGGCGCCTCAGTACCAGAGAACTGCTTCAGTTAGAATCTGGAGCACGGGAGTCACCCCAGAGGATGATTCAGAATATCTTCCAGACAAGCTATGAGGGCAGAACAGAGACCATACCATTCAACCTTTTCCTACTTTCACTTGCCATTGGGATAAGAAAATGGTTGAGGGGCGGTTCTAATACCTCATGCTCTGCCATCGGAAATGATCTCTCAAACATCTCATCATCCATGCAAGCAGACGCCCATTCAAAGAAGGCAGAGCCGGCTTGCCGAGAAGACCAAAGTACGGTGAAGCAGGAGAAGGCAGCTGAGAACGCAGATGGGGAGACGAGAAGCTCGGCTTCGAAGACTGCCCAATATGAACAGAAGCAAGGTTGGCTTGAAGGGAACTCATCAGCAGAATCAGTGGCTGCTGTTTTTAGCTTGGCTTACAAACTTTGGCCTGCTAGTATACTCATTGACAAGGTTGACAGTTTCCAAGAGCGACAACACACTACCATTAGCTTATGGCATCATGGGATGGATTTACGACAGATCATGAGTGGACCTTAA 1428 47.48 MSVSPMGFGTWAWGNQLLWGYQKSMDAELQKTFNLAVENGINLFDTADSYGTATLNGRSEKLLGRFLREFGDEKPLKNDIVIATKFAAYPWRLTPAQFVNACKASLDRLQIDQIGIGQLHWSTANYAPPQEAALWDGLVAMYDKGLVRAVGVSNYGPRQLLKIYDYLQARGVPLCSAQVQFSLLSMGEDQLEIKNVCDSLGIRLIAYSPLGLGMLTGKYSPTKLPPGPRGFLFRKTLPGLEPLLRSLKEIAGQRRKTIPQVVAINWCISKGSIPIPGVKTVEQAKENLGALGWRLSTRELLQLESGARESPQRMIQNIFQTSYEGRTETIPFNLFLLSLAIGIRKWLRGGSNTSCSAIGNDLSNISSSMQADAHSKKAEPACREDQSTVKQEKAAENADGETRSSASKTAQYEQKQGWLEGNSSAESVAAVFSLAYKLWPASILIDKVDSFQERQHTTISLWHHGMDLRQIMSGP 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33902534 33910938 + BLOR17636 Blo06g01053 62346

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01053 475 Gene3D - 1 311 IPR036812 -
Blo06g01053 475 CDD AKR_AtPLR-like 3 304 - -
Blo06g01053 475 Pfam Aldo/keto reductase family 5 304 IPR023210 -
Blo06g01053 475 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 1 316 - -
Blo06g01053 475 MobiDBLite consensus disorder prediction 376 399 - -
Blo06g01053 475 SUPERFAMILY NAD(P)-linked oxidoreductase 2 305 IPR036812 -
Blo06g01053 475 PANTHER PYRIDOXAL REDUCTASE, CHLOROPLASTIC 1 316 - -
Blo06g01053 475 PRINTS Aldo-keto reductase signature 36 60 IPR020471 GO:0016491
Blo06g01053 475 PRINTS Aldo-keto reductase signature 138 155 IPR020471 GO:0016491
Blo06g01053 475 MobiDBLite consensus disorder prediction 369 410 - -
Blo06g01053 475 ProSitePatterns Aldo/keto reductase family signature 2. 138 155 IPR018170 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01053 K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] - zju:107414971 550.051
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01053 Blo-Chr6:33902534 Blo11g00500 Blo-Chr11:4587667 6.20E-20 dispersed
Blo14g00224 Blo-Chr14:1980185 Blo06g01053 Blo-Chr6:33902534 3.93E-08 dispersed
Blo06g01053 Blo-Chr6:33902534 Blo03g00762 Blo-Chr3:32050600 4.98E-66 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g987 Blo06g01053 . . . . . . . . . . Cma15g01005 . Car15g00939 . . . . . . . . . . Cla01g00019 Cam01g0018 Cec01g0016 Cco01g0020 Clacu01g0019 Cmu01g0018 Cre09g2489 . . . . . Csa05g00021 . . . . . Bda15g00795 . Bpe12g00339 Bma08g00397 . . . Cmo15g01068 . . . . . Cpe13g00331 Bhi12g00686 . . . . . . . . . . . . . . . . Cme09g02012
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g01053 Blo_Chr06 FPKM 39.908844 42.673973 36.107044 33.956718 12.667482 13.450302 12.827665 2.297124 2.353685 2.142816