Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01081 ATGTGTCATTTCAGGTTTCAGAATTGGAATTCTGAGAAAACTACTGGCGAGTTATTTTTCACTGATGGCGGAACAAATTCGGAAAAGATCATAATTAGGGATAGATCAGTTTCAGATAAGCTTCAAACAGGGTTTGAATCGGGGACAGACAGATTTAGAAGAATAAAAAAATCATTGAGATCATCTTCATTTAATAAATTCGTGGCCAAAGGCTTAGGTTCTGGAAATAAATTTCTTGATCCACAGGGACCTTTCCTGCAGAAGTGGAACAAGATATTTGTACTGTCTTGCCTAATTGCAGTTTCACTGGATCCGTTGTTCTTTTATGTTCCTGTGATTAATGACTCGGAGAAGTGTCTTTGGTTGGATAATACGATGGAAATTATAGCCATTATCCTAAGATCATTTACTGACATATTCTATGTAGTACATATTATTTTTCAATTTCGTACTGGGTTTATTGCTCCCTCTTCCCGAGTATTTGGTAGAGGTGTTTTGGTTGAAGATTCTAGGGAAATAGCAAAGAGGTACCTGTGGTCATACTTTCTAATCGACATTCTTGCAGTCCTCCCTCTACCTCAGGTAGTTATTTTATTAGTCATTCCAAAATTACGAGGCTCAAGATCGTTGAATACGAAGAATCTATTGAAATTTATTGTCCTCTTTCAATATATTCCGAGGATTCTTAGAATTTATCCGCTATACCAAGAAGTTACAAGGACCTCTGGGATTCTAACTGAGACTGCATGGGCTGGAGCTGCATTTAATCTGTTTCTTTACATGCTAGCGAGCCACGTGCTTGGAGCATTCTGGTATCTGGTTTCCATTGAACGAGAAACCACGTGCTGGCAACGAGCTTGCCTGAATCAGACTGGCTGTGTTCTTGGTTCATTATATTGTGATGGGAGTTCTGGAGGAAATTCATTTCTGAATACATCTTGCCCAATTCAAGACCCAGACAAGAAAAAATTTGATTTTGGAATATTCCTTGATGCTCTTCAATCTGGCGTTGTTGAGTCCATGGATTTTCCACAGAAGTTCTGTTACTGTTTTTGGTGGGGACTGAGAAATTTGAGTTCTCTTGGGCAAAATCTTGAGACGAGTACATATGTTTGGGAAATTTGCTTCGCAGTTTTCATTTCCATTTCAGGCTTGGTGTTATTTTCCTTTCTCATCGGCAATATGCAGACATATCTGCAATCAACGACCACAAGATTAGAGGAGATGAGGGTAAAAAGAAGAGACGCAGAGCAGTGGATGTCACACCGCTTACTTCCTGAGAACCTGAGGGAGCGGATTAGAAGGTATGAACAATACAAATGGCAGGAAACCAGAGGTGTTGATGAAGAGAACCTGGTTCGAAATCTCCCCAAAGATCTTCGAAGAGATATAAAGCGGCATCTCTGCTTGGATCTTCTTATGAGAGTTCCAATGTTTGAAAAGATGGATGAGCAATTGCTGGATGCAATGTGCGACCGTCTCAAACCGGTGCTCTATACAGAGGAGAGTTTCGTTGTTCGAGAAGGTGACCCAGTGGACGAAATGCTTTTCATCATGCGAGGGAAGCTAGTTACGATGACTACAAATGGCGGGCGAACTGGCTTCTTCAATTCCGAGCGCCTCAAAGCAGGGGACTTTTGTGGAGAAGAATTACTAACATGGGCCCTTGATCCTCACTCCTCCATTAATCTCCCCATCTCGACTAGAACAGTTCAAGCTCTTGTAGAAGTCGAGGCCTTCGCCTTAAAAGCTGATGATTTGAAGTTTGTGGCCTCTCAGTTCCGCCGGCTTCACAGCAAACAGCTCCGCCACACTTTTAGGTTGTACTCGCAGCAATGGAGGACATGGGCCGCATGTTTCATCCAAGCAGCCTGGCGTCGCTACAGCAAAAAGAAGCTGGAAGAGTCACTCCTCGAAGAGGAGAATCGATTGAAGGATGCATTGGCAAAAACCGGCGGAAGCTCACCGAGCTTGGGTGCCACCATTTATGCAGCTCGATTTGCGGCAAACGCTCTCCGTTTAATTGGGCGGAATGGCGCTCGCAAAGCCAGAGCGGCAGAAAGAGTTCCGCCATTGCTCCTTCAGAAGCCTGCGGAGCCAGACTTCACGGCCGAGTAA 2118 43.53 MCHFRFQNWNSEKTTGELFFTDGGTNSEKIIIRDRSVSDKLQTGFESGTDRFRRIKKSLRSSSFNKFVAKGLGSGNKFLDPQGPFLQKWNKIFVLSCLIAVSLDPLFFYVPVINDSEKCLWLDNTMEIIAIILRSFTDIFYVVHIIFQFRTGFIAPSSRVFGRGVLVEDSREIAKRYLWSYFLIDILAVLPLPQVVILLVIPKLRGSRSLNTKNLLKFIVLFQYIPRILRIYPLYQEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLVSIERETTCWQRACLNQTGCVLGSLYCDGSSGGNSFLNTSCPIQDPDKKKFDFGIFLDALQSGVVESMDFPQKFCYCFWWGLRNLSSLGQNLETSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLDLLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESFVVREGDPVDEMLFIMRGKLVTMTTNGGRTGFFNSERLKAGDFCGEELLTWALDPHSSINLPISTRTVQALVEVEAFALKADDLKFVASQFRRLHSKQLRHTFRLYSQQWRTWAACFIQAAWRRYSKKKLEESLLEEENRLKDALAKTGGSSPSLGATIYAARFAANALRLIGRNGARKARAAERVPPLLLQKPAEPDFTAE 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34137623 34141792 + BLOR17664 Blo06g01081 62374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01081 705 SUPERFAMILY Voltage-gated potassium channels 80 400 - -
Blo06g01081 705 SMART cnmp_10 478 609 IPR000595 -
Blo06g01081 705 Pfam Cyclic nucleotide-binding domain 498 589 IPR000595 -
Blo06g01081 705 Gene3D Jelly Rolls 476 596 IPR014710 -
Blo06g01081 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 3 704 - -
Blo06g01081 705 SUPERFAMILY cAMP-binding domain-like 407 600 IPR018490 -
Blo06g01081 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 3 704 - -
Blo06g01081 705 ProSiteProfiles cAMP/cGMP binding motif profile. 478 561 IPR000595 -
Blo06g01081 705 Coils Coil 630 650 - -
Blo06g01081 705 CDD CAP_ED 478 609 IPR000595 -
Blo06g01081 705 Gene3D Helix hairpin bin 404 469 - -
Blo06g01081 705 Pfam Ion transport protein 89 405 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo06g01081 705 Gene3D - 92 402 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01081 Blo15g00092 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01081 Blo-Chr6:34137623 Blo15g00092 Blo-Chr15:775799 0 dispersed
Blo07g00344 Blo-Chr7:5213007 Blo06g01081 Blo-Chr6:34137623 8.58E-132 dispersed
Blo07g00347 Blo-Chr7:5251135 Blo06g01081 Blo-Chr6:34137623 1.04E-60 dispersed
Blo13g00116 Blo-Chr13:2340115 Blo06g01081 Blo-Chr6:34137623 1.36E-126 dispersed
Blo15g00035 Blo-Chr15:280556 Blo06g01081 Blo-Chr6:34137623 9.79E-134 dispersed
Blo01g01719 Blo-Chr1:56916482 Blo06g01081 Blo-Chr6:34137623 0 transposed
Blo06g00645 Blo-Chr6:29437398 Blo06g01081 Blo-Chr6:34137623 0 transposed
Blo10g00466 Blo-Chr10:9677810 Blo06g01081 Blo-Chr6:34137623 0 transposed
Blo13g00053 Blo-Chr13:779490 Blo06g01081 Blo-Chr6:34137623 0 transposed
Blo14g00599 Blo-Chr14:10325640 Blo06g01081 Blo-Chr6:34137623 0 transposed
Blo14g00625 Blo-Chr14:11893334 Blo06g01081 Blo-Chr6:34137623 0 transposed
Blo15g00091 Blo-Chr15:758894 Blo06g01081 Blo-Chr6:34137623 1.05E-07 wgd
Blo06g01081 Blo-Chr6:34137623 Blo07g00342 Blo-Chr7:4604952 2.81E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01081 K05391 - rcu:8274372 1149.42