Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01091 ATGGCGGAAAGAATGAGGTTATCCACATTATTTCTCTCCTTTTTCTTCTTCTTCTTTTCTCCATCATTTTCCTTTGATTTCCCCAGTGGAGCAGACTTGTGGTGCAAGAAAACCCCATACCCAGAAACCTGCAAATACTTCTTCAAGGATTACAAAAATGGCTTCCTGCACATGTCCGACTTCAAAAAAAGGGCAGTCCAAATCGCCCTGGAAAGAGCTTTAAAAGCTCAGAGCCATAATAAATGGCTAGGAGGAAAATGCAGAAACGAGAAAGAGAAAGCTGCATGGGCTGACTGCTTAGAGCTCTACCAGAGCACCATTCTTCAACTCAACAAAACCATAGACCCTACGATCAAATGCACCGAATTAGATTCGCTAACTTGGCTCAGCTCGGCCCTGACGAATCTCGAAACTTGTCGGGCTGGATTCGTCGATCTAAACGTGACAGATTATCTGCTTCCACTCATGTCGAACAATGTGTCGAAGCTAATCAGCAACACTTTGGCGATCGACAGAGGTAACTTATCTGACCAAATTCCGGGGCAAAATGAAGTTTACGAGGATGGTTTTCCGAGTTGGGTTTCCGGAGGAGATCGTAAGCTCTTGCAATCGTCGTCTCCGAACGCTGACATTGTGGTGGCACAGGACGGGTCTGGAAATTACCGGACGGTGACGGAGGCGGTGGCAGCTGCCGGGAAGAGGAGCGGAAGTGGGAGGTTTGTGATATACGTGAAGAAGGGGGTTTACACGGAGAATATAGTGATGGGGAATAAGTTAACTAATATAATGTTGATCGGAGATGGAATGAGATATACCATTATTACTGGTAGTAAAAGCGTCGGAGGTGGTTCTACGACTTTCAATTCTGCGACTTTTGGTGTGATAGGAGACGGGTTTATTGCTCGTGGCATCACGTTCCGTAACACGGCCGGAGCAGCAAATCACCAGGCGGTGGCCCTCCGATCAGGTGCTGACCTATCTGTGTTCTACCGATGTGGTTTCGAGGGATACCAAGACACCCTCTACGTACACTCCCAACGACAATTTTATCGAGAATGCTACATCTACGGCACAGTCGATTTCATCTTCGGCAACGCCGCAGTTGTTCTCCAAAACTGCATGATCTTACCCAGAAAACCATTGTCCGGGCAACAAATCACGCTCACGGCCCAGGGTAGGACCGACCCCAATCAAAACACGGGAATCTCAATCCATAACTGTCGTGCCTCGCCGGCGGCGGATCTTGCACCTGTCCAAACCACAGTGAGAGCGTACCTCGGAAGACCATGGCAAGCGTATTCACGCACGGTTTACTTGCAAACGTTTCTCGACTCATTCATAAACCCGGCAGGGTGGCTGGAATGGGACGGAAACTTCGCGTTGAATACTTTGTATTACGGCGAGTACAAGAATTTCGGACCTGGTTCGGCGACAAACCAGAGAGTGCAATGGAAGGGTTATCATGTTATAACGAGTGCAACAGTGGCTTCACAATTTACAGTGCAGAACTTTATTGCCGGTGGGTCGTGGCTGCCCGGAACCGGAGTTCCGTTCACCGCCGGACTATGA 1569 48.69 MAERMRLSTLFLSFFFFFFSPSFSFDFPSGADLWCKKTPYPETCKYFFKDYKNGFLHMSDFKKRAVQIALERALKAQSHNKWLGGKCRNEKEKAAWADCLELYQSTILQLNKTIDPTIKCTELDSLTWLSSALTNLETCRAGFVDLNVTDYLLPLMSNNVSKLISNTLAIDRGNLSDQIPGQNEVYEDGFPSWVSGGDRKLLQSSSPNADIVVAQDGSGNYRTVTEAVAAAGKRSGSGRFVIYVKKGVYTENIVMGNKLTNIMLIGDGMRYTIITGSKSVGGGSTTFNSATFGVIGDGFIARGITFRNTAGAANHQAVALRSGADLSVFYRCGFEGYQDTLYVHSQRQFYRECYIYGTVDFIFGNAAVVLQNCMILPRKPLSGQQITLTAQGRTDPNQNTGISIHNCRASPAADLAPVQTTVRAYLGRPWQAYSRTVYLQTFLDSFINPAGWLEWDGNFALNTLYYGEYKNFGPGSATNQRVQWKGYHVITSATVASQFTVQNFIAGGSWLPGTGVPFTAGL 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34203091 34204789 - BLOR17674 Blo06g01091 62384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01091 522 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Blo06g01091 522 Gene3D - 204 522 IPR012334 -
Blo06g01091 522 PANTHER PECTINESTERASE 6 521 - -
Blo06g01091 522 SMART PMEI_2 26 170 IPR006501 GO:0004857
Blo06g01091 522 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 172 IPR035513 -
Blo06g01091 522 Pfam Plant invertase/pectin methylesterase inhibitor 34 170 IPR006501 GO:0004857
Blo06g01091 522 PANTHER PECTINESTERASE 6 521 - -
Blo06g01091 522 Pfam Pectinesterase 210 507 IPR000070 GO:0030599|GO:0042545
Blo06g01091 522 CDD PMEI-like_3 33 170 - -
Blo06g01091 522 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 170 IPR006501 GO:0004857
Blo06g01091 522 SUPERFAMILY Pectin lyase-like 205 521 IPR011050 -
Blo06g01091 522 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 170 IPR035513 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01091 Blo07g00338 CCT
Blo06g01091 Blo09g00029 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01091 Blo-Chr6:34203091 Blo07g00810 Blo-Chr7:25995500 4.78E-155 dispersed
Blo02g00277 Blo-Chr2:2673369 Blo06g01091 Blo-Chr6:34203091 8.86E-100 transposed
Blo06g01006 Blo-Chr6:33299721 Blo06g01091 Blo-Chr6:34203091 0 transposed
Blo16g00613 Blo-Chr16:24726464 Blo06g01091 Blo-Chr6:34203091 0 transposed
Blo06g01091 Blo-Chr6:34203091 Blo07g00473 Blo-Chr7:10502942 0 wgd
Blo06g01091 Blo-Chr6:34203091 Blo07g00338 Blo-Chr7:4366211 2.23E-144 wgd
Blo06g01091 Blo-Chr6:34203091 Blo09g00029 Blo-Chr9:358877 8.92E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01091 K01051 - csin:114301469 736.873