Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01108 ATGGCTTCTTCAGTTTTCTCTCTCCCCATCCCTCCAATCCCCACTCGCTTTCGTAAGAGCAAATGGACACTCGCTTCCTCCTCCCTCCCTCCTCTCCAACTGCCAAAACCAGTTCCGCCATGTTCAGTCATTTCTCTACGCAAGAAGCCATTAAAGACGACGGTAGCAACCTCTGCTTACGTAACAGGGCCAGCCTCGGACCCGATTGTGGGGGAGCTCGATTTGAAGGTAAATGGGTCGGATTCTCAGACGCAGTTGCAGGGTGTGATTCATTGGGGCCTATTGTGGCGGCTTTTGACGAAGCACAAGCTGAGAATGGGGATTTGTGTGGTTTCTCTCATTGGATGCACCTCTTGCACCCTTTCGATGCCTATCTTTTCTGGAAGATTTTTCGAAGTACTTATAGGAGCAAGACCGGAGCCTTTGTGGAGATTACTTAGTAAGGTTGGAATTTTGTATGCATTGGAGCCGGTGTTAACAATTATCTTTGTCGTAAACATAAACACAATATGGGAGAAAGTTATGTCCAGATTAAGGGCGCAGATTTTTGGAAGGTTGCTCATTCAAAAGGTTGGTGAAATCACGGGTTTGTTAACATCGGACTTGGGTTCGCTTAAAGACGTGGTGAGCGAGAATATTTCAAGAGATCGTGGATTCAGAGCACTTTCAGAGGCAAGCAACTTTACACCAAGCCCAAGTACTTGGCACAATATGCATATTATTTACTTTGTCCCCCCAACTCGCTCCAATTTTAGGTGTTTTGATGCTCACTCCATATATAAGCGTTCAACTATTCCTGTTTTTAAAGCTCATGGGTTGGCCCAAGCATCCATGGCCGACTGTGTGACAGAGACATTTTCTGCTATTCGAACTGTAAGATCGTTTAGCGGCGAGAAACGTCAAATGTTAATGTTTGGCCGGCAGATTCTTGCATATGAGAGCAGTGGGCTAAAGCTTGGGACTTTTAAATCTATTAACGAATCCGTAACGAGAATTGCTGTTTATATTTCTCTTCTTGCCTTGTATAGTCTCGGAGGAAGCAGAGTGAAGGCGGGCGAACTTTCCGTTGGAACTGTGGCCTCTTTCATCGGATATACGTTCACTTTAACGTTTGCCGTTCAAGGATTGGTAAACACGTTGGGAGATCTCCGAGGAATGTTGGCAGCAGTAGAGAGAATTAATTCGATTTTATCTGGGGTCGAAATCGATAATTCACTTGCCTATGGTTTAGAGAGAGAAATGCAGCAAAAGAAACTCCGGGACGAAAAGTACGAATTGTTCTTCGGGGGTGATTCCGACGAGGAAGACAAATCTCGAGAAACGCATTACATGTCTGCTCTGAAATCCGCTAGCAATGTCAACAATCTGGCTTGGTCCGGCGATATACGTCTTGAAGGTACATTTTGCTTTTTTTTCATGCAATTTCCGCGAAAAAATCTTTCATTTAAGTTCATTTCTCCTTCAGATGTGCACTTCTCTTATCCGTTAAGGCCGGACGTGGAAATTCTTAACGGGTTGAATTTAACGATTAAATGTGGAACTATAACTGCTTTGGTCGGTCCAAGCGGGGCCGGAAAGAGTACCATAGTACAACTTTTGTCGAGATTCTACGAGCCAACTAGAGGTCATATAACGGTTAACGGTGAAGACGTTCGAACATTTGACAAGACCGAATGGGCTCGAGCTGTTTCAATCGTAAATCAGGAACCTGTTCTTTTTTCGGTGTCTGTCGGAGAAAATATTGCGTATGGGCTTCCGGACGATTATGTGTCCAAGGACGAAGTGATAAAGGCGGCGAAGGCCGCAAATGCTCACGAGTTCATCATTTCACTTCCACAGGGTTATGACACGCTCGTCGGAGAACGCGGTGGTCTACTTAGCGGCGGTCAGAGGCAGAGAATTGCCATTGCCAGAGCTTTGCTCAAGAACGCTCCAATTTTGATACTCGATGAGGCTACCAGTGCATTGGACGCAGTGAGCGAGCGACTGGTCCAGGAAGCGCTAAACCATCTCATGAAAGGGAGGACGACGCTAGTCATCGCACATCGTCTGAGCACAGTTCAGAACGCTCATCAAATCGCAGTGTGTTCAAACGGCACGATCGTGGAGCTCGGGTTTCACTCAGAACTCTTGGCGAAGCAGGGCCAGTACGCAGCTCTAGTCGGCACGCAAAGGCTGGCTTTCGAGTGA 2190 46.44 MASSVFSLPIPPIPTRFRKSKWTLASSSLPPLQLPKPVPPCSVISLRKKPLKTTVATSAYVTGPASDPIVGELDLKVNGSDSQTQLQGVIHWGLLWRLLTKHKLRMGICVVSLIGCTSCTLSMPIFSGRFFEVLIGARPEPLWRLLSKVGILYALEPVLTIIFVVNINTIWEKVMSRLRAQIFGRLLIQKVGEITGLLTSDLGSLKDVVSENISRDRGFRALSEASNFTPSPSTWHNMHIIYFVPPTRSNFRCFDAHSIYKRSTIPVFKAHGLAQASMADCVTETFSAIRTVRSFSGEKRQMLMFGRQILAYESSGLKLGTFKSINESVTRIAVYISLLALYSLGGSRVKAGELSVGTVASFIGYTFTLTFAVQGLVNTLGDLRGMLAAVERINSILSGVEIDNSLAYGLEREMQQKKLRDEKYELFFGGDSDEEDKSRETHYMSALKSASNVNNLAWSGDIRLEGTFCFFFMQFPRKNLSFKFISPSDVHFSYPLRPDVEILNGLNLTIKCGTITALVGPSGAGKSTIVQLLSRFYEPTRGHITVNGEDVRTFDKTEWARAVSIVNQEPVLFSVSVGENIAYGLPDDYVSKDEVIKAAKAANAHEFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQEALNHLMKGRTTLVIAHRLSTVQNAHQIAVCSNGTIVELGFHSELLAKQGQYAALVGTQRLAFE 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34502770 34509612 + BLOR17691 Blo06g01108 62401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01108 729 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 52 727 - -
Blo06g01108 729 ProSitePatterns ABC transporters family signature. 626 640 IPR017871 GO:0005524
Blo06g01108 729 SUPERFAMILY ABC transporter transmembrane region 95 213 IPR036640 GO:0005524|GO:0016021
Blo06g01108 729 CDD ABC_MTABC3_MDL1_MDL2 488 724 - -
Blo06g01108 729 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 52 727 IPR039421 -
Blo06g01108 729 Pfam ABC transporter 503 654 IPR003439 GO:0005524
Blo06g01108 729 Gene3D ABC transporter type 1, transmembrane domain 256 454 IPR036640 GO:0005524|GO:0016021
Blo06g01108 729 SUPERFAMILY ABC transporter transmembrane region 259 398 IPR036640 GO:0005524|GO:0016021
Blo06g01108 729 Pfam ABC transporter transmembrane region 260 372 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g01108 729 Pfam ABC transporter transmembrane region 107 214 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g01108 729 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 259 385 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g01108 729 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 108 214 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo06g01108 729 Gene3D ABC transporter type 1, transmembrane domain 79 215 IPR036640 GO:0005524|GO:0016021
Blo06g01108 729 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 485 723 IPR003439 GO:0005524
Blo06g01108 729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 724 IPR027417 -
Blo06g01108 729 Gene3D - 485 726 IPR027417 -
Blo06g01108 729 SMART AAA_5 512 686 IPR003593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01108 Blo-Chr6:34502770 Blo18g00361 Blo-Chr18:3808264 1.59E-63 dispersed
Blo06g01108 Blo-Chr6:34502770 Blo18g00360 Blo-Chr18:3795415 4.95E-64 transposed
Blo06g01108 Blo-Chr6:34502770 Blo07g01389 Blo-Chr7:33963366 4.12E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01108 K05657 - fve:101303858 975.311