Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01110 ATGGAGGTTTTCTCAACTCTGTTTGATTCGAATTGTGGGTCTTCGGAAAGAAGTGATATTAGCGGGAGGCGGAATTTTTCCGACGGGGAGCTTATTCTGGCGGCGAGCTCTCCGAAGAAGAGAGCAGGAAGGAAGAAGTTTAAGGAGACGAGGCACCCAGTTTTCCGGGGAGTGAGGAGGAGGAACTCCGGAAAGTGGGTTTGTGAAGTAAGAGAGCCGACTAAGCAGGCTAGGATTTGGCTTGGGACGTTTCCGACGGTGGAAATGGCGGCCAGAGCCCATGACGTGGCAGCAATTGCTCTCCGCGGCCGGGCCGCTTGCTTAAACTTCGCAGACTCTGCATGGCGGCTTCCTGTGCCGGCATCGACAGAGGCCAAGGATATTCAGAAGGCAGCGGCGGAAGCTGCAGAGGCATTTCGACCACGGCCAGAGCATGAGGAGTTCAATCCCGATATATTCCCGGCAGAAGCGCCGGAGAATGTCTTCTACATGGACGAGGAGGCTGTTTTCGGGATGCCAGGGTTGCTGGCAAACATGGCGGAGGGAATGCTATTGCCTCCGCCTCAGGGGGAGGAAGGGAGAGTTGATGACGCCGATTTCCATGCTGACGTGTCATTATGGAGTTACTCTATATAA 636 54.72 MEVFSTLFDSNCGSSERSDISGRRNFSDGELILAASSPKKRAGRKKFKETRHPVFRGVRRRNSGKWVCEVREPTKQARIWLGTFPTVEMAARAHDVAAIALRGRAACLNFADSAWRLPVPASTEAKDIQKAAAEAAEAFRPRPEHEEFNPDIFPAEAPENVFYMDEEAVFGMPGLLANMAEGMLLPPPQGEEGRVDDADFHADVSLWSYSI 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34522694 34523329 - BLOR17693 Blo06g01110 62403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01110 211 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR 15 211 - -
Blo06g01110 211 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Blo06g01110 211 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 15 211 IPR045277 GO:0003700
Blo06g01110 211 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Blo06g01110 211 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Blo06g01110 211 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Blo06g01110 211 SUPERFAMILY DNA-binding domain 54 113 IPR016177 GO:0003677
Blo06g01110 211 CDD AP2 55 113 IPR001471 GO:0003700|GO:0006355
Blo06g01110 211 Gene3D AP2/ERF domain 54 112 IPR036955 GO:0003700|GO:0006355
Blo06g01110 211 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01110 Blo15g00153 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01095 Blo-Chr2:41857139 Blo06g01110 Blo-Chr6:34522694 3.30E-60 dispersed
Blo03g00192 Blo-Chr3:4603081 Blo06g01110 Blo-Chr6:34522694 2.59E-63 dispersed
Blo06g01110 Blo-Chr6:34522694 Blo15g00153 Blo-Chr15:1552776 2.24E-105 dispersed
Blo06g01109 Blo-Chr6:34509872 Blo06g01110 Blo-Chr6:34522694 1.58E-152 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12539 PF00847 AP2 1.20E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01110 - K09286 fve:101302987 274.248