Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo06g01111 | ATGGCTGATTCTCCCTCTAAAACCCATCTCAGTGATCCAGTCAGCCCACCTCCCAATCCACCTCTGCCGCCGCCGTTGCCGCCGTCGCCTTCTCCAGCGCCTGTTGCTTTGCAAGAAAGAGTTCCAGGAGGAGACCCTGATCTTATAATTCCTTCTGTTCCTGTTGTTTCTCCTGTTTCAGTTACTTCTCAACTGATCTCGCCGGTGACCGGCAGGCATCCGGCTTACAGGGGAATTCGAAGTCGAAGCGGGAAATGGGTGTCGGAAATCCGGGAGCCACGTAAAACCACCCGCATTTGGCTTGGAACTTACTTGACGCCGGAAATGGCGGCAGCAGCATATGATGTTGCAGCCATTGCTCTGAAAGGCCCGGACACGCCATTGAATTTTCCGAACTTGATTCTATCGTATCCGATTCCAGCTTCTGCTTCTCCTGCCGATATTCGCGCTGCAGCAGCTATTGCTGCAGCGGCTCAGCAGCCAAGGCCGCCGGAGAGAGGCGGTGAAAGCTCCCAACTTAGCCTGCCAGTTTCAGAAGAGCTGCCGAGTGCGGTGGAGGGGGAAACATCAGAGTTTGTTGACGAGGAAGAGTTGCTGAATATGCCCAATGTGCTCGTAGACATGGCTAAAGGTATGCTGGTAAGCCCTCCTCGGATGAAGTCATCATCTTCCGACGACTCGCCGGACGATTCAGCCGGTGTTGGACTATGGAATTACAGTTAA | 723 | 53.8 | MADSPSKTHLSDPVSPPPNPPLPPPLPPSPSPAPVALQERVPGGDPDLIIPSVPVVSPVSVTSQLISPVTGRHPAYRGIRSRSGKWVSEIREPRKTTRIWLGTYLTPEMAAAAYDVAAIALKGPDTPLNFPNLILSYPIPASASPADIRAAAAIAAAAQQPRPPERGGESSQLSLPVSEELPSAVEGETSEFVDEEELLNMPNVLVDMAKGMLVSPPRMKSSSSDDSPDDSAGVGLWNYS | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 34529809 | 34530531 | - | BLOR17694 | Blo06g01111 | 62404 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo06g01111 | 240 | ProSiteProfiles | AP2/ERF domain profile. | 75 | 131 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g01111 | 240 | MobiDBLite | consensus disorder prediction | 11 | 35 | - | - | |
Blo06g01111 | 240 | CDD | AP2 | 76 | 133 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g01111 | 240 | Gene3D | AP2/ERF domain | 75 | 132 | IPR036955 | GO:0003700|GO:0006355 | |
Blo06g01111 | 240 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 | 62 | 239 | - | - | |
Blo06g01111 | 240 | MobiDBLite | consensus disorder prediction | 155 | 184 | - | - | |
Blo06g01111 | 240 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 62 | 239 | - | - | |
Blo06g01111 | 240 | SUPERFAMILY | DNA-binding domain | 75 | 132 | IPR016177 | GO:0003677 | |
Blo06g01111 | 240 | Pfam | AP2 domain | 74 | 123 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g01111 | 240 | SMART | rav1_2 | 75 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g01111 | 240 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Blo06g01111 | 240 | MobiDBLite | consensus disorder prediction | 215 | 240 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo06g01111 | Blo07g00430 | CCT | |
Blo06g01111 | Blo09g00093 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g01111 | Blo-Chr6:34529809 | Blo09g00514 | Blo-Chr9:16302623 | 5.89E-48 | dispersed | |
Blo06g01109 | Blo-Chr6:34509872 | Blo06g01111 | Blo-Chr6:34529809 | 2.40E-37 | proximal | |
Blo06g01111 | Blo-Chr6:34529809 | Blo07g00430 | Blo-Chr7:8484956 | 2.26E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12540 | PF00847 | AP2 | 2.70E-09 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo06g01111 | - | - | pvy:116138978 | 188.734 |