Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01111 ATGGCTGATTCTCCCTCTAAAACCCATCTCAGTGATCCAGTCAGCCCACCTCCCAATCCACCTCTGCCGCCGCCGTTGCCGCCGTCGCCTTCTCCAGCGCCTGTTGCTTTGCAAGAAAGAGTTCCAGGAGGAGACCCTGATCTTATAATTCCTTCTGTTCCTGTTGTTTCTCCTGTTTCAGTTACTTCTCAACTGATCTCGCCGGTGACCGGCAGGCATCCGGCTTACAGGGGAATTCGAAGTCGAAGCGGGAAATGGGTGTCGGAAATCCGGGAGCCACGTAAAACCACCCGCATTTGGCTTGGAACTTACTTGACGCCGGAAATGGCGGCAGCAGCATATGATGTTGCAGCCATTGCTCTGAAAGGCCCGGACACGCCATTGAATTTTCCGAACTTGATTCTATCGTATCCGATTCCAGCTTCTGCTTCTCCTGCCGATATTCGCGCTGCAGCAGCTATTGCTGCAGCGGCTCAGCAGCCAAGGCCGCCGGAGAGAGGCGGTGAAAGCTCCCAACTTAGCCTGCCAGTTTCAGAAGAGCTGCCGAGTGCGGTGGAGGGGGAAACATCAGAGTTTGTTGACGAGGAAGAGTTGCTGAATATGCCCAATGTGCTCGTAGACATGGCTAAAGGTATGCTGGTAAGCCCTCCTCGGATGAAGTCATCATCTTCCGACGACTCGCCGGACGATTCAGCCGGTGTTGGACTATGGAATTACAGTTAA 723 53.8 MADSPSKTHLSDPVSPPPNPPLPPPLPPSPSPAPVALQERVPGGDPDLIIPSVPVVSPVSVTSQLISPVTGRHPAYRGIRSRSGKWVSEIREPRKTTRIWLGTYLTPEMAAAAYDVAAIALKGPDTPLNFPNLILSYPIPASASPADIRAAAAIAAAAQQPRPPERGGESSQLSLPVSEELPSAVEGETSEFVDEEELLNMPNVLVDMAKGMLVSPPRMKSSSSDDSPDDSAGVGLWNYS 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34529809 34530531 - BLOR17694 Blo06g01111 62404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01111 240 ProSiteProfiles AP2/ERF domain profile. 75 131 IPR001471 GO:0003700|GO:0006355
Blo06g01111 240 MobiDBLite consensus disorder prediction 11 35 - -
Blo06g01111 240 CDD AP2 76 133 IPR001471 GO:0003700|GO:0006355
Blo06g01111 240 Gene3D AP2/ERF domain 75 132 IPR036955 GO:0003700|GO:0006355
Blo06g01111 240 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 62 239 - -
Blo06g01111 240 MobiDBLite consensus disorder prediction 155 184 - -
Blo06g01111 240 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 62 239 - -
Blo06g01111 240 SUPERFAMILY DNA-binding domain 75 132 IPR016177 GO:0003677
Blo06g01111 240 Pfam AP2 domain 74 123 IPR001471 GO:0003700|GO:0006355
Blo06g01111 240 SMART rav1_2 75 137 IPR001471 GO:0003700|GO:0006355
Blo06g01111 240 MobiDBLite consensus disorder prediction 1 44 - -
Blo06g01111 240 MobiDBLite consensus disorder prediction 215 240 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01111 Blo07g00430 CCT
Blo06g01111 Blo09g00093 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01111 Blo-Chr6:34529809 Blo09g00514 Blo-Chr9:16302623 5.89E-48 dispersed
Blo06g01109 Blo-Chr6:34509872 Blo06g01111 Blo-Chr6:34529809 2.40E-37 proximal
Blo06g01111 Blo-Chr6:34529809 Blo07g00430 Blo-Chr7:8484956 2.26E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12540 PF00847 AP2 2.70E-09 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01111 - - pvy:116138978 188.734