Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01116 ATGAACAGAGCCCATTTCCATGGCGGGAGCGGCTACGCAATTTCCCGCCGATTTCTCGAGAGATCACAGATCAGTCGTCTTCTTCTTTCTTCTTCTTCCTCATCGTCAAAATCGAGAAGAATGCAAATCAAGCTGAAGTGCTCGTGCGGGGAAGGGAAATGTCCTGAATGGGCGATTATTGAATTGCAAGGGGTCGTCGAAGTGCAGCCCTGCTTTCAAGATCGCCTCCAAAACCTCCAAATCGGTACTCTCTGCCGCCCTTCCGGTCAGGAAGTATATACTTTCACTGTTGGATATCATGAACTAACTGGAACAAAAGTACCTTTAAAGAAGCCATTTCTGGTGTTGAAGAAGAAGAAATGTCAAGATCTGGAGCAGAACAGTGAGACCAATTCTGGGGAGGCGGAATTGGAAGTCATCGGAATCATTAGGCATCGTATTTTGTTCAAGACAAGACCAAAAGCCATAATTTCCAATAAGATTGTGAAATTAAGGAGGGAAGGGGTTTCTTGTGATGATTTCAGTGTTACATTTGTTGAATGTTGTAGCCGGGAGAACGGCCGTGTAAGATGGGACGAAGAAAATCTGGAAAAAATCGAGACAACTAAACCCGTGAGGCAGAAAATCACTGAACCGAAGACTCCATACCATCCCATGATTTATGATGATGGATCTCTTTCTCCTATACATGTTAGCTTCGATGATTGTCTTGGCGACTCAGTGCAGGCAGAAGCCATAATAACTGCTTTGAATGATGTGGCTTCTTCAAGTGGTAAGAACGACCAACAACAGAGTGGTTCGTCTTCATCTGAGGACGAAGCAGTTGCAATGGAACAAGAGGCCGAAGATTCTGAGACGGATAAGAGTGGCATGAGTTTTAAGGAGCACAGAAAAGCTCACTATGATGAATTTCAAAAAGTAAAAGAACTCCTGAGGAATGGTTCATTTCTCGAGAACGATGTCGACGAGTACGATGACATTCAGCCGGACAAGGAGGGAAGATGCGATTCGTCATCTTCACTAAGTGCTGGTGTAAAGGATGTTGACATCAAGAAAGAGGACTCGGAAAGCTCTACGAAAAAACTCTCAACGCCACCGATAAATGGAAGCTCGAGCTAG 1119 44.59 MNRAHFHGGSGYAISRRFLERSQISRLLLSSSSSSSKSRRMQIKLKCSCGEGKCPEWAIIELQGVVEVQPCFQDRLQNLQIGTLCRPSGQEVYTFTVGYHELTGTKVPLKKPFLVLKKKKCQDLEQNSETNSGEAELEVIGIIRHRILFKTRPKAIISNKIVKLRREGVSCDDFSVTFVECCSRENGRVRWDEENLEKIETTKPVRQKITEPKTPYHPMIYDDGSLSPIHVSFDDCLGDSVQAEAIITALNDVASSSGKNDQQQSGSSSSEDEAVAMEQEAEDSETDKSGMSFKEHRKAHYDEFQKVKELLRNGSFLENDVDEYDDIQPDKEGRCDSSSSLSAGVKDVDIKKEDSESSTKKLSTPPINGSSS 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34572663 34579091 - BLOR17699 Blo06g01116 62409

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01116 372 MobiDBLite consensus disorder prediction 281 296 - -
Blo06g01116 372 MobiDBLite consensus disorder prediction 254 274 - -
Blo06g01116 372 Pfam Protein phosphatase inhibitor 2 (IPP-2) 189 320 IPR007062 GO:0004864|GO:0009966|GO:0043666
Blo06g01116 372 MobiDBLite consensus disorder prediction 254 296 - -
Blo06g01116 372 MobiDBLite consensus disorder prediction 318 372 - -
Blo06g01116 372 Pfam Ctf8 90 154 IPR018607 GO:0007064|GO:0031390
Blo06g01116 372 PANTHER CHROMOSOME TRANSMISSION FIDELITY PROTEIN 8 41 165 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01116 K16833 PPP1R2, IPP2; protein phosphatase inhibitor 2 - jre:109007629 226.868
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00162 Blo-Chr15:1652911 Blo06g01116 Blo-Chr6:34572663 9.62E-93 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g650 Blo06g01116 . . . . . . . . . . Cma15g01099 . . . . . . . . . . . . . . . . . . . . . Cone14ag0096 Cone15ag0102 . Csa05g00572 Chy09g00933 . . . . . . Bpe12g00421 Bma08g00338 . . . . . . . . . Cpe13g00047 . . . . . . . . . . . . . . Lsi09g00581 . . Cme09g01460
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010128 0 5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 1 1 1 2 0 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g01116 Blo_Chr06 FPKM 2.606576 3.430681 0.0 0.0 17.040821 15.178136 16.664249 1.109929 0.819364 1.035583