Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01120 ATGTTCAAGTCGTGGAGCAAAAAGAACAGGGTCAAAGCTGTATTCAAATTACAGTTCCAGGCAACACAGGTACCGAAGTTGAAAAAATCAGCTTTGATGATATATTTCGTACCGGAGGATGCAGGAAAGCCAACAGTGAAATTGGAGAAAGCAGAAGTGGAGGATGGAATGTGTGTTTGGGAGAATCCTGTGTACGAAACAGTAAAACTGATTAGGGAGCAAAAGACAGGAAAAATGCACGAGAAGATATACCATTTCATTGTTTCGACAGTGACAATTCAGCGAACTGATGGGGATAAACCTAATCAAAGAGATGAGGAAAGAAGCTTTGAGAACCAACCTGGCTATAACCACGAAGATGGAAACTACAATTCTGCTGAAGTATGGTCCTCATTTCATCATCCTTCATTTTACTTCACAAATGAGACTCCCAAACAAAATGTTCCTGGAATCGACAACAATGATGCACACACTCCCACTACCTTTTTTTCAACTCTCAGGCAAAATTCGATGCCTAGAGCAGAAAAAAGGGACCATGTTATGACGCAAAATCAAGGTCATAGGAGATCAAACACCAATTGGTCAATGGGTTCAGTTTCTGATGGAAGCTTTGGAGATTCAACACACAGCTTTGAAGACAACCATTCAAGAGATAGATTGAAAGAGGCTGATGATACGGTTGAAAAAGTCAAGAATGAAAATGTTTTGCTGATCAGGCAGCTGGAAGTATCACAAATGGAGTTCCAGACTCTTCGTAAACAGGTTGCAAAGGAGGTCACTCAAGGACAGAACCTATCCAGACAAGTTATTAGCCTTACGGAGGAGAAAGATGCACTTAAAACAGAATGCAAACAACTCAAATACTTGAAGAAATATAATGACGAGGCTGAAGACACAAAATTATTGCAGTCTGAGATCAAGGATACCAGGGTTCAGTTGGAAGTTGTGAGACAAGAGCTTGAACATGAAAAGAAATTAAGAACCAATTTTGAGTTGCAAGTTCTTAAAACACAGGAGTCAAACTCGGAGTTAATTCTTGCAGTCACAGAGCTCGAAGAAATAATTGAGCTGAAAGATAGAGTGATTGCTGATCTGAAAAGAAATCTAGAAACATGGAAGACTGCAACTCAAAATACTGAAAGTAAACAGTATTCGGGAGAGCTGGATAAAGATCAACATGACATCGAGGAACTAGAAATGTTGAAGCAAAAGATTACTGAACTGAAGGGGGAAATAAATATCCAAGAGATACAGAAGGATGAGTTAAGGATGCAGATAGAACAGCTGACATTGAACAATGGGAGTTTAAAGCAAGAAAATCAAGACATATCTATGAAGTTAGATGAAAATATGAAACACTATACAATCAAACAAAATGCGTACTCTAATTCCTTGGTTCTCGTAAATGAACTTGAAGAGAAAGTAGAAATGTTAGAAGTGGAAATCGAAAGGCAGGCTCATGGATTGTCAGAATCTTTGACAACAATCAATGAACTTCAATTTCAAGTCAAGGACTTGGAGACAGAACTGGAGAAGCAGGCACAAGGATTTGATGACAATATCAATGCCATGAGATCTGCCAAAATTAAGGAAGAACAGAGGGCCATTAAATCAGAGGAGGCCTTGAGGAAGACAAGGTGGAAGAATGCAGTTACAGCTGAACGACTTCAGGAAGAATTTAAGAAAATTTCAGCAGAGATGGCATCCAAGTATGATGACAATGAGAGGATAACAATGAAAGCAGTTACAGAAGCTAATGAATTACGTCAGCAAAACAGCATTTTGGAAGAAATGCTCCAGAATGCCAATGAAGAATGCAGGCTAATTAAAGATCAGACGGCTGTAAAACTGCAAGAACTTTGCAACCAACTAGACATAAAAACAAAGCAAGCAGAGGAAATGCTGATAGAGCTAGGCAACAAGTCAAAACAACTTGAAAACATACAAAAGCATGATAACACAGGGCAGCAGGAAATTCAAAGGCTTCACTCCATGATAGAACAGCTCACTGCAGAAAAACCAGAGAGAGAATTATTTAACTCAGCTGCTGAAAGGGATAATTTGGAGAAAACAGTCGGTTTAGCAAATAAGGAATCAGATATATCAAATGAGAACCTGGTGCAAATGAAAATTTTAAATGATCAGAAGGATATGACGATTGCGGATTTGTTTTCAGAAGTAGAAGACATTAAAACTCAATATAATGAGTTAAAAATGGCTACCTACAAAGAAGATCGTGAGAAAGAAAATTTAAGAAAGCAAGTAAATCAGTTAAAGGAAGAGCTCCTGAAGAAAGAAGAGATAATGACCAGTGCAGAGAAGAACCACAAACGCAAAGCTCTAGAAACTGGAGCTTCAGATGTAAACTTGGCTTCACTTGATAATGAATCAGAGGCATTTCTTCATAATTCAACAGAGGTTGCAACTTTGCAGAAGACAGTACAATTGCTACAGGAAAAAATACAAATTAAGGAAGCTGCTCTGGAAAACTCAACAACCTCATTTCTAGCAGAGAAAGAGAAACTTCATAGTACAACCAAAGAACTCGAACGAAAACTGGAACTACTCACTTTTGAAACATCAGAAAAGGAGAGCAGGTGTGCTAGGAGCGTAACAACAAGTATTAGAAACTCCAAACAAGATGAACAAGAAAGTCTACTACATTCCAAGACACGCAATAACAATGATGTACCAGCCCATAAAGAAGCTGGTGTTCCATTCACTGAAAGGAAATGGAAAACCTACTCTGATAAGGAAATTCAACAGCCAAACAGTATTGGTAGCAAAGAGACCATTTTTAGTGACCTCTACTTTGAAATATCTATGCTAAAAGAAAGGAACATATCTATGGAAAAGGAACTGAAGGAAATGGAAGAGAGATATTCTGAGGTAAGTCTAAAGTTTGCCGAAGTTGAAGGTGAGAGACAACAACTTGTCATGACAGTACGCAATCTTCAGAATGGTAAGAAGAACTAA 2976 38.27 MFKSWSKKNRVKAVFKLQFQATQVPKLKKSALMIYFVPEDAGKPTVKLEKAEVEDGMCVWENPVYETVKLIREQKTGKMHEKIYHFIVSTVTIQRTDGDKPNQRDEERSFENQPGYNHEDGNYNSAEVWSSFHHPSFYFTNETPKQNVPGIDNNDAHTPTTFFSTLRQNSMPRAEKRDHVMTQNQGHRRSNTNWSMGSVSDGSFGDSTHSFEDNHSRDRLKEADDTVEKVKNENVLLIRQLEVSQMEFQTLRKQVAKEVTQGQNLSRQVISLTEEKDALKTECKQLKYLKKYNDEAEDTKLLQSEIKDTRVQLEVVRQELEHEKKLRTNFELQVLKTQESNSELILAVTELEEIIELKDRVIADLKRNLETWKTATQNTESKQYSGELDKDQHDIEELEMLKQKITELKGEINIQEIQKDELRMQIEQLTLNNGSLKQENQDISMKLDENMKHYTIKQNAYSNSLVLVNELEEKVEMLEVEIERQAHGLSESLTTINELQFQVKDLETELEKQAQGFDDNINAMRSAKIKEEQRAIKSEEALRKTRWKNAVTAERLQEEFKKISAEMASKYDDNERITMKAVTEANELRQQNSILEEMLQNANEECRLIKDQTAVKLQELCNQLDIKTKQAEEMLIELGNKSKQLENIQKHDNTGQQEIQRLHSMIEQLTAEKPERELFNSAAERDNLEKTVGLANKESDISNENLVQMKILNDQKDMTIADLFSEVEDIKTQYNELKMATYKEDREKENLRKQVNQLKEELLKKEEIMTSAEKNHKRKALETGASDVNLASLDNESEAFLHNSTEVATLQKTVQLLQEKIQIKEAALENSTTSFLAEKEKLHSTTKELERKLELLTFETSEKESRCARSVTTSIRNSKQDEQESLLHSKTRNNNDVPAHKEAGVPFTERKWKTYSDKEIQQPNSIGSKETIFSDLYFEISMLKERNISMEKELKEMEERYSEVSLKFAEVEGERQQLVMTVRNLQNGKKN 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34642525 34646938 + BLOR17703 Blo06g01120 62413

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01120 991 Coils Coil 262 282 - -
Blo06g01120 991 PANTHER BNAC08G20130D PROTEIN 1 90 - -
Blo06g01120 991 PANTHER BNAC08G20130D PROTEIN 91 991 - -
Blo06g01120 991 Coils Coil 388 446 - -
Blo06g01120 991 Coils Coil 940 974 - -
Blo06g01120 991 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 97 IPR019448 -
Blo06g01120 991 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 90 - -
Blo06g01120 991 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 91 991 - -
Blo06g01120 991 Coils Coil 617 637 - -
Blo06g01120 991 Coils Coil 348 382 - -
Blo06g01120 991 Coils Coil 553 573 - -
Blo06g01120 991 MobiDBLite consensus disorder prediction 869 901 - -
Blo06g01120 991 Coils Coil 306 326 - -
Blo06g01120 991 MobiDBLite consensus disorder prediction 208 225 - -
Blo06g01120 991 Coils Coil 807 827 - -
Blo06g01120 991 MobiDBLite consensus disorder prediction 881 901 - -
Blo06g01120 991 Coils Coil 220 240 - -
Blo06g01120 991 Coils Coil 720 775 - -
Blo06g01120 991 MobiDBLite consensus disorder prediction 185 207 - -
Blo06g01120 991 Coils Coil 585 612 - -
Blo06g01120 991 MobiDBLite consensus disorder prediction 98 114 - -
Blo06g01120 991 MobiDBLite consensus disorder prediction 95 119 - -
Blo06g01120 991 Coils Coil 461 516 - -
Blo06g01120 991 MobiDBLite consensus disorder prediction 174 225 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01120 - - - mcha:111025605 786.949
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01105 Blo-Chr2:42030697 Blo06g01120 Blo-Chr6:34642525 3.15E-11 dispersed
Blo06g01120 Blo-Chr6:34642525 Blo18g00207 Blo-Chr18:2027121 3.61E-10 dispersed
Blo03g00203 Blo-Chr3:4756519 Blo06g01120 Blo-Chr6:34642525 4.67E-20 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g663 Blo06g01120 . . . . . . . . . Cma02g01064 . Car02g00807 . . Cpe05g00655 . . . . . . . . Cla01g00281 Cam01g0291 Cec01g0284 Cco01g0297 Clacu01g0290 Cmu01g0277 Cre09g2230 . . Cone14ag0089 Cone15ag0095 . Csa05g00299 Chy09g01206 . . . . Bda15g00731 . Bpe12g00427 . . . Cmo02g01081 Cmo15g01279 . . . . . Cpe13g00164 Bhi12g00227 . . Lac11g2114 Hepe06g1563 . Lcy12g1671 . . . . . . . . . . Cme09g01743
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007478 1 1 1 0 1 1 4 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g01120 Blo_Chr06 FPKM 1.882947 2.083032 1.57465 1.907088 6.451326 5.672053 5.06499 3.666173 3.463836 3.233805