Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01132 ATGGAAAGTCTTCCCGAAATTTCACTAGGACCAGAAATTAACGGCTCAGATTCGGTTCTTGCACGAGAGGTTTCCGATCATGATGAACTCCGGACGGAGCTCGATTCTCTCCGGGAGGGCTATCGGAGTCTCGAATCGAAGCTTAGAGAGTTGGAGGATGCGAAGGTTGTGATTCAGAATGAGAGAGACGAGGAGGTGAATCGAAACGCGGAGTTAGTAAAAGGAATCGATGAGATTCGGAGAGAGAGGGAGTTTGTAGGAAGTGAAGTTTCAAGGCTTGAAGCGGATTTGAGAGATAAAGAGGAAGCGTTCGTGAAAAGATTGGATGAGGAAGAGAAGGAGAAGGAGGAATTGAAGAACGAAGTGGAGGTTTGTAGGGGAAGGGTCGATAAATTGGAAAATGAGAGGCAAGAGAAGAAAGAAGTTTTGAAAAAATGTCTGGATTCACTAGTTTCAGCGAAGGATTGCTTGACGAGGGTAATTGAAGGAATCGGCGAAGGAAAAGTAAAAGATGGTGGAGAAGAAAGCGAGGAAATGAACTTGGGATTGAAAATGGACGACGAATTAAGTCCACTTTCAGTTGGTATAGCGGAAGTGGACAGGCTTGCGAGGATAGTGGAGGTGAAGGTGGAAGAGTACAAAGAGCTCAGAAAGAAAGAGAAAAGAGAGTTGGAGAGTAGTTTGGTGAGTTTGACTGAGGAGAATCGTGATATCAACAGTCTGCTTCGGATCGCTCTGGTGGAGAAGGAGGCTGTAGAAAAGAGTTTAAATAGGTTGAAGGGGAATACTGAACAGAAGAGGGTGGCCCTTTTGCAGATTGCAGAGAGGGGGTTGCAGAGAGTGGGGTTCGGATTTATGATGGGTAGTGGTAATTATGAGCAGTCTGTAGACATTGCCGGAGTTAATGCGGGTAGTAAGGTCGATGAATCTGGTGCTAACTCAGAGACCAGGTCTGATAATAGTGAAAGTGAAGAAGAACGCCTACAAAGTCTATGTGAAAAACAAGCTAAAAGAATCGAAGATAACTTTCTGTACATCAAGGAGTTAGAAGATCGAGAGAGGGTTTTGGTGCAAAATGTTGATGAACTTCTATTGGAAATAAAGGACACTGAAGCAGAGGTTGCCAGATGGAGGGAAGCTTGTGAACTAGAAGTTGAATTAGGAAAAAGTGAGATCATGGAACGTGACAAGGTGGTTGCCATTTTGAAGCAAGAGCTTGAGAAAACAAAGACTGCTTTAGAAATATCAAATGGGAAATTGCAGCTGAAAGAAGAACTTGTAGCTGCAGCCATGGCTGCCCAGGCAGCGGCCGAAAAGTCTCTGCAAGTAGCAGACAGCCGAGCGGCAGTGCTCCGAGAAAGGGCGGAGGAATTAACAAGACAACTAGAAGAAGCTGAGAGCAAGGAGCGGCAGAATCGAAGGGTCAGACGCTTGTGCTGGCCATGGCGGGTTCCGAAGGTAAGTAATTCTGCTAATTCAACAAATAGAGATGATAATGCGAAACGTATGTTGCCTGAAATGCAGGCACTGCTTCATTTCACCACCTGA 1548 45.28 MESLPEISLGPEINGSDSVLAREVSDHDELRTELDSLREGYRSLESKLRELEDAKVVIQNERDEEVNRNAELVKGIDEIRREREFVGSEVSRLEADLRDKEEAFVKRLDEEEKEKEELKNEVEVCRGRVDKLENERQEKKEVLKKCLDSLVSAKDCLTRVIEGIGEGKVKDGGEESEEMNLGLKMDDELSPLSVGIAEVDRLARIVEVKVEEYKELRKKEKRELESSLVSLTEENRDINSLLRIALVEKEAVEKSLNRLKGNTEQKRVALLQIAERGLQRVGFGFMMGSGNYEQSVDIAGVNAGSKVDESGANSETRSDNSESEEERLQSLCEKQAKRIEDNFLYIKELEDRERVLVQNVDELLLEIKDTEAEVARWREACELEVELGKSEIMERDKVVAILKQELEKTKTALEISNGKLQLKEELVAAAMAAQAAAEKSLQVADSRAAVLRERAEELTRQLEEAESKERQNRRVRRLCWPWRVPKVSNSANSTNRDDNAKRMLPEMQALLHFTT 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34786067 34789564 + BLOR17715 Blo06g01132 62425

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01132 515 Coils Coil 27 68 - -
Blo06g01132 515 Coils Coil 403 423 - -
Blo06g01132 515 MobiDBLite consensus disorder prediction 304 326 - -
Blo06g01132 515 PANTHER OS08G0559800 PROTEIN 15 317 IPR040300 -
Blo06g01132 515 PANTHER OS08G0559800 PROTEIN 319 514 IPR040300 -
Blo06g01132 515 PANTHER OS08G0559800 PROTEIN 15 317 - -
Blo06g01132 515 Coils Coil 441 478 - -
Blo06g01132 515 MobiDBLite consensus disorder prediction 312 326 - -
Blo06g01132 515 Coils Coil 199 241 - -
Blo06g01132 515 MobiDBLite consensus disorder prediction 1 26 - -
Blo06g01132 515 PANTHER OS08G0559800 PROTEIN 319 514 - -
Blo06g01132 515 Coils Coil 346 380 - -
Blo06g01132 515 Coils Coil 76 149 - -
Blo06g01132 515 Gene3D - 8 165 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01132 - - - tcc:18605588 501.901
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01132 Blo-Chr6:34786067 Blo06g00839 Blo-Chr6:31636837 1.41E-23 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g715 Blo06g01132 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag0078 Cone15ag0079 . . . . . . . Bda15g00716 . Bpe12g00436 Bma08g00297 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016619 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 7
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g01132 Blo_Chr06 FPKM 9.458014 9.269236 8.626989 8.207827 7.873598 8.51964 8.049987 7.980164 8.69223 7.892903