Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01135 ATGCCTTTATGGTGGGGAAAGTCAACAGTTAAAGAAGTGCAAAATAAAACAAACAAGGACAGTTTTATTGATTCGCTACACCGAAAATTTAAAAGTCAATCTGCCAGCAAAGTAAATAACCGACCAGTACAGTCAAGAAGATGTGGTGCAGACATAATTTCCGAGAAGGGATCTCGATCTTCTGTGGTATCAAGATCACCTTCTCCTTCCAAACATGTTTCAAGATGTCAAAGTTTCGTTGAAAGGACTCATGCTCAACCACTTCCACTTCCTGTTAAAGAGCATAAAACTGTTGGACGGCTAGACTCTAGGGTTAGAGCAACAAAAGCAAGATCTGATCGAGGTTCTAAGCTATTTCTGCCTCTCCCAAGACCGGCATGCATCTGCAGTATGCCAAATCCCGAAGATATTGAAGGAGATTTAGTTACTGGTTCAGTATGTAGTGAGAGCTCTACTGATAGTATTAGTGATTATCGTAGTGAGTTGCATCATCGTAGCCCTCAGGCAACCAACAATGATTCTGGAACCAGAACAACTGCAGGCAGCCCAGCCAGGGATTGTTACTCAACTGTCACCCGACCAAATTCAAATGATGCCAAAAAACCAATTGATCTTCTGACTGTGAATCCTGTTTCTTATACATCACCCAGACAAAGGCCTTTAAGTAATCATGTTCTAAATCTAAAAGTTCCTTGTCATGGGGTTTTCAGTGCTCCAGACAGTTACATGTCAAGTCCTGTCAGAAGTCCCATGAGAGCATTTAACACTGAGCAAGCCATTAACACTGCTTTCTGGTCTGGGAAGGATTGTCCTGACATCACTTTTACTGGCTCCGGCAATTGCTCTAGTCCTGGTTCTGGTTACAATTCTGGGCATAATTCAATGGGAGGTGATCTTTCAGGCCAGATATTCTTGCAGCATAGCAGAGGTAGTCCTGAATATTCTCCAGTTCCTAGTCCTAAAATGGCAAGCCCTGGTCCTAGCTCACGAATTCATAGCGGTGCTGTCACGCCTATTTATTCCGGAGCAGGGGAAACTCCCCATGAATCACAGACAAGCTGCTCTGATGGGAAACAAAGTCACCGTTTACCTCTTCCTCCTATAATAATCTCAAACCCTCCCTTTTCTCAGTCAAATTCAGCAGCAACTTCTCCATCCATGCAAAGAAGTCCAGGTAGGGGAGAGACTCTGGCTAGCCCTGGCCCACGCTGGAAAAAGGGAAAGCTTCTGGGTAGGGGAACATTTGGACATGTTTATGTTGGGTTTAACAGTGAAAGTGGCCAAATGTGTGCAATGAAAGAGGTCACATTATTTTCAGATGATGCAAAATCTAAAGAAAGCGCCAAGCAATTGATGCAGCAGGAAATTGCTTTGTTGAGCCGTTTAAGACATCCCAACATCGCGCAGTATTATGGATCTGAAGCAGTGGGTGACAAGCTATATATATACTTGGAGTATGTATCCGGTGGCTCTATCCATAAGCTTCTTCAAGAATATGGACAGTTTGGTGAACTGGCAATTCGTACTTATACTCAACAAATTTTGTCTGGCCTTGCATATCTACATTCCAAAAATACTGTACATAGAGATATCAAAGGAGCAAATATACTTGTTGATCCAAATGGTCGAGTCAAATTGGCAGATTTTGGGATGGCAAAGCATATAACTGGGCAATCATATCCATTGTTATTCAAAGGCAGTCCTTACTGGATGGCACCGGAAGTTATCAGGAATTCAAATGTTTGTAATCTTGCTGTCGATATTTGGAGTCTTGGATGCACAGTTTTAGAGATGGTCACAACAAAACCACCTTGGAGCCAATATGAAGGAGTTGCAGCCATGTTCAAGATCGATAAAAGTAAAGAACTCCCATCGATTCCAGATCACCTATCGGAAGATGGGAAGGATTTTGTGAGGCAATGCTTGCAAAGGAATCCACCTCACCGTCCTTCGGCTGCTCAACTTTTGGAGCATCGGTTTGTCAAATTTTCTGCACCCCTTGAAAGACATAATTTTGGTTCTGAATTTTCAGATCCGAACTCTGGGGTTACAGGAAAAGTGAAAGCTCTGGGCATTGGACATGATCGAAATCTCGGCACACTGGACTCAGATGGACTCGGGGCTCGTTCAATTAGAGTCTTAAAACCCGGTGTCCACTTAAGCGAAATCCACATTCTGAGGAACGTATCGTGCCCTGTTTCACCGGCCAGAAGCCCACTTTTGCGCTCTCACTCCCCATATCACCCAAACGGAAGAATGTCTTCTTCTCCTATTTCGAGCCCCCACACAACTTCAGATTCATCTACCCCTCTTTCGGGCTGTAATTGCGCTATTACGGGCAACTCAAAACACTCAACATGCTTCCAAGACGGATTCAAAATCCTGCAAAAACCAGCAAATAATGGTTTCTGCACGAACGGACCTTATTTTGCAGAATCTGGCCCCAACGTCTCCAGACAACTTGCACACGGTGAAAATGACGCCCTCAAAAAACAGTTTGCAGGCCCCACCTCCCCAAATGGAGAACCGTACGATGGCCAGTCCATTTTGGCCGATCAAGTGTCTCGGCAGCTCCGTAGTCATCATGTTAAAAGCAGTCCCGGCTCTCCTCTCACCAGCCGCACGATTGATCTATGA 2637 44.37 MPLWWGKSTVKEVQNKTNKDSFIDSLHRKFKSQSASKVNNRPVQSRRCGADIISEKGSRSSVVSRSPSPSKHVSRCQSFVERTHAQPLPLPVKEHKTVGRLDSRVRATKARSDRGSKLFLPLPRPACICSMPNPEDIEGDLVTGSVCSESSTDSISDYRSELHHRSPQATNNDSGTRTTAGSPARDCYSTVTRPNSNDAKKPIDLLTVNPVSYTSPRQRPLSNHVLNLKVPCHGVFSAPDSYMSSPVRSPMRAFNTEQAINTAFWSGKDCPDITFTGSGNCSSPGSGYNSGHNSMGGDLSGQIFLQHSRGSPEYSPVPSPKMASPGPSSRIHSGAVTPIYSGAGETPHESQTSCSDGKQSHRLPLPPIIISNPPFSQSNSAATSPSMQRSPGRGETLASPGPRWKKGKLLGRGTFGHVYVGFNSESGQMCAMKEVTLFSDDAKSKESAKQLMQQEIALLSRLRHPNIAQYYGSEAVGDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRTYTQQILSGLAYLHSKNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSYPLLFKGSPYWMAPEVIRNSNVCNLAVDIWSLGCTVLEMVTTKPPWSQYEGVAAMFKIDKSKELPSIPDHLSEDGKDFVRQCLQRNPPHRPSAAQLLEHRFVKFSAPLERHNFGSEFSDPNSGVTGKVKALGIGHDRNLGTLDSDGLGARSIRVLKPGVHLSEIHILRNVSCPVSPARSPLLRSHSPYHPNGRMSSSPISSPHTTSDSSTPLSGCNCAITGNSKHSTCFQDGFKILQKPANNGFCTNGPYFAESGPNVSRQLAHGENDALKKQFAGPTSPNGEPYDGQSILADQVSRQLRSHHVKSSPGSPLTSRTIDL 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34801017 34806033 - BLOR17718 Blo06g01135 62428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01135 878 Gene3D Transferase(Phosphotransferase) domain 1 403 680 - -
Blo06g01135 878 MobiDBLite consensus disorder prediction 372 393 - -
Blo06g01135 878 SMART serkin_6 404 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g01135 878 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 802 - -
Blo06g01135 878 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 802 - -
Blo06g01135 878 MobiDBLite consensus disorder prediction 167 197 - -
Blo06g01135 878 MobiDBLite consensus disorder prediction 748 770 - -
Blo06g01135 878 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 369 375 IPR002052 GO:0003676|GO:0008168|GO:0032259
Blo06g01135 878 Pfam Protein kinase domain 405 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g01135 878 CDD STKc_MEKK1_plant 403 661 - -
Blo06g01135 878 MobiDBLite consensus disorder prediction 153 202 - -
Blo06g01135 878 ProSitePatterns Protein kinases ATP-binding region signature. 410 433 IPR017441 GO:0005524
Blo06g01135 878 SUPERFAMILY Protein kinase-like (PK-like) 402 760 IPR011009 -
Blo06g01135 878 MobiDBLite consensus disorder prediction 308 404 - -
Blo06g01135 878 MobiDBLite consensus disorder prediction 344 359 - -
Blo06g01135 878 ProSiteProfiles Protein kinase domain profile. 404 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g01135 878 MobiDBLite consensus disorder prediction 740 770 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01135 Blo-Chr6:34801017 Blo17g00831 Blo-Chr17:27019624 4.07E-101 dispersed
Blo06g01135 Blo-Chr6:34801017 Blo09g00076 Blo-Chr9:1371274 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84358 PF00069 Pkinase 4.90E-70 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01135 K20717 - pop:7454524 1106.28