Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo06g01152 | ATGGCAAGTCAGCCTCGCATCAATTCTGCTCTCGTAGTTGCCATTCGTATGGCCAAGATGTCGAAGTCAAATACAACTGGTGATTCTCAAAAAATTTATCATTTTGTACGCAATCAGCATAGGCCGGATAAGGCATACACTACAGAGCGGGCCCAGAAAAGTGGGAAGGCCAATGCAGCAAGTGGGAAGATATTTGTTACTATTCCATCTGATCATTTTGGACCCATCCCTGCTGAAAATGATCCTGGACGAAATCAGGGTGTGCTTGTTGGTGAAACTTGGGAGGACAGGTTGGAGTGTCGACAATGGGGTGCTCACTTTCCTCACGTGGCAGGCATTGCAGGGCAGTCAAACTATGGTGCACAATCAGTAGTTCTTTCTGGAGGTTACCAAGATGATGAGGATCATGGAGAGTGGTTTCTCTACACTGGGAGCGGTGGTAGAGACCTCAGTGGCAACAAACGGACAAGCAAGGACCAGTCGTTTGACCAGCAATTCGAGAAAATGAATAAAGCACTCAAAGTTAGTTGTTTGATGGGTTATCCTGTTAGGGTAGTTAGGTCGCATAAAGAGAAACGCTCTTCATATGCCCCTGAGAAAGGTTTGCGGTATGATGGAGTCTATAGAATTGAGAAATGTTGGCGAAAAGTGGGAGTTCAGGGTTTTAAAGTTTGCAGGTACTTATTTGTCAGGTGTGACAATGATCCAGCTCCTTGGACTAGTGATGAACATGGAGATCGCCCTAGAGCCTTTCCTGGCATTGCAGAGTTAAAAAAAGCAACGGACATCACAGAAAGGAAGGGAAGTCCATCGTGGGATTTCAATGTGGAAGATAATTGCTGGGTGTGGAAGAAACCTCCACCAGCAAGCAAGAAACCAATTGAAATAGAGGGTTCTGATTCAAGAAAGAGATCAATAAGAGCAATCAGGAAAGCTCATAAAATGACTGTTAGAGAAAGATTATTGAAAGAGTTCAGCTGCCTTATATGCAGACAAGTAATGACTCAGCCTGTGACAACTCCCTGTGCCCATAATTTTTGCAAGGCATGCTTGGAAGGCCGGTTTGCTGACAAGACATTCATGAGAGACAGAAGCAAAGGCGGAAGGACACTTCGGTCCCAAAAGAATATCAGGATTTGTCCTTCTTGTTCTTTGGACATCTCTGATTTTCTTCAAAATCTTCAGGTAAATCGGGAGTTACTTGACGTAATCGAAACACTAAAAAGTCAGAATGAAGAAAATGGCAATTCTGCTGATGAGTCATCTGAGGATGAAACTAATGATCAAGAGGTGAGCAAAGACAATTCTACTGAGAAATCAGATGTACCAAATAAGGATAATGAAGCCGAAGTGCATCCTAGCAAAGTTACTCCAAAAAGGGCTCAAAAGCGAATGAAACTCGACGAGCCTGAGAGTATCGATGCAGCCAAAGGTGGAGGCACAGAAGTGGATAAATCAGGATTAACTGAGGAATGCGATGGATCAGAAAAGGAAACAGCAAGCGGGAAAGCTAAGGAAGTGATGGATGGCAATGATAGCGATTCGCCGTTAGTCTTCTCAACGTGA | 1566 | 44.0 | MASQPRINSALVVAIRMAKMSKSNTTGDSQKIYHFVRNQHRPDKAYTTERAQKSGKANAASGKIFVTIPSDHFGPIPAENDPGRNQGVLVGETWEDRLECRQWGAHFPHVAGIAGQSNYGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQQFEKMNKALKVSCLMGYPVRVVRSHKEKRSSYAPEKGLRYDGVYRIEKCWRKVGVQGFKVCRYLFVRCDNDPAPWTSDEHGDRPRAFPGIAELKKATDITERKGSPSWDFNVEDNCWVWKKPPPASKKPIEIEGSDSRKRSIRAIRKAHKMTVRERLLKEFSCLICRQVMTQPVTTPCAHNFCKACLEGRFADKTFMRDRSKGGRTLRSQKNIRICPSCSLDISDFLQNLQVNRELLDVIETLKSQNEENGNSADESSEDETNDQEVSKDNSTEKSDVPNKDNEAEVHPSKVTPKRAQKRMKLDEPESIDAAKGGGTEVDKSGLTEECDGSEKETASGKAKEVMDGNDSDSPLVFST | 521 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 34939690 | 34944153 | + | BLOR17735 | Blo06g01152 | 62445 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo06g01152 | 521 | SUPERFAMILY | RING/U-box | 320 | 411 | - | - | |
Blo06g01152 | 521 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 305 | 434 | IPR013083 | - | |
Blo06g01152 | 521 | MobiDBLite | consensus disorder prediction | 428 | 475 | - | - | |
Blo06g01152 | 521 | ProSitePatterns | Zinc finger RING-type signature. | 342 | 351 | IPR017907 | - | |
Blo06g01152 | 521 | ProSiteProfiles | Zinc finger RING-type profile. | 327 | 384 | IPR001841 | - | |
Blo06g01152 | 521 | SUPERFAMILY | PUA domain-like | 57 | 249 | IPR015947 | - | |
Blo06g01152 | 521 | MobiDBLite | consensus disorder prediction | 408 | 521 | - | - | |
Blo06g01152 | 521 | Pfam | SAD/SRA domain | 83 | 234 | IPR003105 | - | |
Blo06g01152 | 521 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED | 1 | 505 | IPR045134 | - | |
Blo06g01152 | 521 | SMART | ring_2 | 327 | 383 | IPR001841 | - | |
Blo06g01152 | 521 | MobiDBLite | consensus disorder prediction | 484 | 510 | - | - | |
Blo06g01152 | 521 | SMART | G9a_1 | 78 | 235 | IPR003105 | - | |
Blo06g01152 | 521 | PANTHER | FINGER PROTEIN, PUTATIVE-RELATED | 1 | 505 | - | - | |
Blo06g01152 | 521 | Gene3D | - | 54 | 250 | IPR036987 | - | |
Blo06g01152 | 521 | ProSiteProfiles | YDG domain profile. | 83 | 231 | IPR003105 | - | |
Blo06g01152 | 521 | Pfam | RING-type zinc-finger | 327 | 361 | IPR027370 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g01152 | Blo-Chr6:34939690 | Blo17g00555 | Blo-Chr17:9965473 | 2.51E-19 | dispersed | |
Blo15g00186 | Blo-Chr15:1947080 | Blo06g01152 | Blo-Chr6:34939690 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo06g01152 | K10638 | - | cit:102609711 | 738.799 |